Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41607 Davidia involucrata HOM05D005548 ORTHO05D007497 9.0e-265 916.4 467 100.0
Dinv36636 Davidia involucrata HOM05D005548 ORTHO05D007497 7.7e-224 780.4 471 87.5
TAR383G0243 Trochodendron aralioides HOM05D005548 ORTHO05D007497 9.2e-201 703.7 471 78.1
Hma1.2p1_0518F.1_g171060 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 2.9e-199 698.7 411 86.1
Haze_25730 Corylus avellana HOM05D005548 ORTHO05D007497 1.1e-198 696.8 475 78.5
Haze_25723 Corylus avellana HOM05D005548 ORTHO05D007497 1.6e-197 693.0 475 78.3
Actinidia09420 Actinidia chinensis HOM05D005548 ORTHO05D007497 2.1e-197 692.6 472 77.5
Nn2g11732 Nelumbo nucifera HOM05D005548 ORTHO05D007497 1.4e-196 689.9 471 76.4
CiPaw.04G163600 Carya illinoinensis HOM05D005548 ORTHO05D007497 8.9e-196 687.2 471 78.3
Cfa021563 Carpinus fangiana HOM05D005548 ORTHO05D007497 2.0e-195 686.0 472 78.0
Cpa.g.sc23.102 Carica papaya HOM05D005548 ORTHO05D007497 7.5e-195 684.1 472 77.3
CSS0001162 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.3e-194 683.3 462 79.0
QL02p085206 Quercus lobata HOM05D005548 ORTHO05D007497 1.3e-194 683.3 475 77.1
CSS0009071 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.9e-193 679.5 462 78.8
Eucgr.C01037 Eucalyptus grandis HOM05D005548 ORTHO05D007497 7.0e-193 677.6 471 74.5
Manes.03G021300 Manihot esculenta HOM05D005548 ORTHO05D007497 3.5e-192 675.2 476 75.8
GSVIVG01015386001 Vitis vinifera HOM05D005548 ORTHO05D007497 1.0e-191 673.7 466 76.6
Thecc.09G109700 Theobroma cacao HOM05D005548 ORTHO05D007497 1.5e-190 669.8 471 76.6
Duzib168G0181 Durio zibethinus HOM05D005548 ORTHO05D007497 3.6e-189 665.2 473 75.1
PGR142G0895 Punica granatum HOM05D005548 ORTHO05D007497 6.8e-188 661.0 451 75.2
TWI63G0439 Tripterygium wilfordii HOM05D005548 ORTHO05D007497 4.4e-187 658.3 470 73.8
Potri.018G080900 Populus trichocarpa HOM05D005548 ORTHO05D007497 1.3e-186 656.8 470 74.9
MBI04_g22012_MAGBIO Magnolia biondii HOM05D005548 ORTHO05D007497 4.1e-185 651.7 475 73.3
Nitab4.5_0005947g0010 Nicotiana tabacum HOM05D005548 ORTHO05D007497 2.7e-184 649.0 469 74.8
Sabra18G0068100 Salix brachista HOM05D005548 ORTHO05D007497 3.9e-183 645.2 467 74.7
Prupe.7G231800 Prunus persica HOM05D005548 ORTHO05D007497 6.6e-183 644.4 475 73.1
PGSC0003DMG400000312 Solanum tuberosum HOM05D005548 ORTHO05D007497 6.6e-183 644.4 470 73.6
Cc06_g09710 Coffea canephora HOM05D005548 ORTHO05D007497 8.6e-183 644.0 485 72.8
arahy.Tifrunner.gnm1.ann1.HQIA7A Arachis hypogaea HOM05D005548 ORTHO05D007497 2.5e-182 642.5 480 72.1
MD02G1046200 Malus domestica HOM05D005548 ORTHO05D007497 2.5e-182 642.5 476 72.9
VMungo0464G1126 Vigna mungo HOM05D005548 ORTHO05D007497 9.5e-182 640.6 478 72.0
Solyc12g007090.2 Solanum lycopersicum HOM05D005548 ORTHO05D007497 2.8e-181 639.0 470 73.0
Atru.chr7.1357 Acer truncatum HOM05D005548 ORTHO05D007497 3.6e-181 638.6 383 84.3
CAN.G1529.9 Capsicum annuum HOM05D005548 ORTHO05D007497 3.6e-181 638.6 465 74.0
Sopen12g003070 Solanum pennellii HOM05D005548 ORTHO05D007497 3.6e-181 638.6 470 72.8
ClCG00G004520 Citrullus lanatus HOM05D005548 ORTHO05D007497 1.1e-180 637.1 471 71.8
Lj2g0015861 Lotus japonicus HOM05D005548 ORTHO05D007497 1.1e-180 637.1 401 78.8
THA.LOC104811114 Tarenaya hassleriana HOM05D005548 ORTHO05D007497 2.3e-180 636.0 476 71.2
Lj7C651T8 Lonicera japonica HOM05D005548 ORTHO05D007497 8.9e-180 634.0 477 73.2
Actinidia20374 Actinidia chinensis HOM05D005548 ORTHO05D007497 1.5e-179 633.3 374 85.3
Glyma.07G085900 Glycine max HOM05D005548 ORTHO05D007497 1.5e-179 633.3 475 70.3
Glyma.09G191000 Glycine max HOM05D005548 ORTHO05D007497 2.0e-179 632.9 473 70.8
Gohir.D07G005900 Gossypium hirsutum HOM05D005548 ORTHO05D007497 7.5e-179 630.9 471 71.8
DCAR_010452 Daucus carota HOM05D005548 ORTHO05D007497 9.9e-179 630.6 472 71.8
Gohir.A07G006100 Gossypium hirsutum HOM05D005548 ORTHO05D007497 9.9e-179 630.6 471 71.8
Hund26198 Selenicereus undatus HOM05D005548 ORTHO05D007497 8.3e-178 627.5 471 71.3
Gorai.001G005500 Gossypium raimondii HOM05D005548 ORTHO05D007497 1.1e-177 627.1 471 71.3
EL10Ac8g18489 Beta vulgaris HOM05D005548 ORTHO05D007497 1.4e-177 626.7 465 72.0
FAN19G0123 Fragaria x ananassa HOM05D005548 ORTHO05D007497 1.4e-177 626.7 466 71.5
Sc18g0001240 Simmondsia chinensis HOM05D005548 ORTHO05D007497 1.4e-177 626.7 472 71.2
Phvul.004G163700 Phaseolus vulgaris HOM05D005548 ORTHO05D007497 2.4e-177 625.9 478 70.3
FvH4_1g04721 Fragaria vesca HOM05D005548 ORTHO05D007497 3.2e-177 625.5 466 71.5
COL.COLO4_34874 Corchorus olitorius HOM05D005548 ORTHO05D007497 4.1e-177 625.2 377 83.0
Lalb_Chr14g0371531 Lupinus albus HOM05D005548 ORTHO05D007497 5.4e-177 624.8 468 71.8
Sed0013441 Sechium edule HOM05D005548 ORTHO05D007497 7.1e-177 624.4 466 70.6
MELO3C025346.2 Cucumis melo HOM05D005548 ORTHO05D007497 3.5e-176 622.1 489 68.5
CsaV3_1G024240 Cucumis sativus L. HOM05D005548 ORTHO05D007497 3.5e-176 622.1 501 67.3
Migut.K00455 Erythranthe guttata HOM05D005548 ORTHO05D007497 3.5e-176 622.1 413 77.5
MSTRG.26421 Avicennia marina HOM05D005548 ORTHO05D007497 3.0e-175 619.0 411 76.4
RcHm_v2.0_Chr2g0090331 Rosa chinensis HOM05D005548 ORTHO05D007497 3.0e-175 619.0 467 71.5
Lalb_Chr22g0352791 Lupinus albus HOM05D005548 ORTHO05D007497 2.5e-174 615.9 473 71.0
FAN26G0240 Fragaria x ananassa HOM05D005548 ORTHO05D007497 3.3e-174 615.5 468 71.2
Peaxi162Scf00546g00024 Petunia axillaris HOM05D005548 ORTHO05D007497 5.6e-174 614.8 469 72.3
HanXRQChr06g0179971 Helianthus annuus HOM05D005548 ORTHO05D007497 4.7e-173 611.7 395 77.5
Ca_03976_v3 Cicer arietinum L. HOM05D005548 ORTHO05D007497 6.2e-173 611.3 399 77.7
Lsat_1_v5_gn_8_95001 Lactuca sativa HOM05D005548 ORTHO05D007497 8.1e-173 610.9 465 70.3
Aqoxy7G01651 Aquilegia oxysepala HOM05D005548 ORTHO05D007497 2.4e-172 609.4 470 68.9
FAN23G0305 Fragaria x ananassa HOM05D005548 ORTHO05D007497 2.4e-172 609.4 472 69.9
Nitab4.5_0002904g0080 Nicotiana tabacum HOM05D005548 ORTHO05D007497 8.9e-172 607.4 469 72.3
SGA_v2.0_scaffold307G48040 Striga asiatica HOM05D005548 ORTHO05D007497 1.4e-169 600.1 424 71.9
SalBow1G6148 Salvia bowleyana HOM05D005548 ORTHO05D007497 2.4e-169 599.4 477 69.4
AUR62010987 Chenopodium quinoa HOM05D005548 ORTHO05D007497 6.0e-168 594.7 376 78.2
PSO832G1226 Papaver somniferum HOM05D005548 ORTHO05D007497 6.0e-168 594.7 493 65.1
PSO782G1908 Papaver somniferum HOM05D005548 ORTHO05D007497 1.3e-167 593.6 473 66.6
MD15G1184300 Malus domestica HOM05D005548 ORTHO05D007497 8.7e-167 590.9 475 68.4
TPR.G18453 Trifolium pratense HOM05D005548 ORTHO05D007497 1.5e-166 590.1 476 68.3
ECA233G4048 Erigeron canadensis HOM05D005548 ORTHO05D007497 4.3e-166 588.6 382 76.4
unitig_899.g15439 Utricularia gibba HOM05D005548 ORTHO05D007497 5.6e-166 588.2 407 73.5
Medtr6g088460 Medicago truncatula HOM05D005548 ORTHO05D007497 4.8e-165 585.1 464 68.5
AT5G19540 Arabidopsis thaliana HOM05D005548 ORTHO05D007497 2.4e-164 582.8 473 65.3
ATR0315G003 Amborella trichopoda HOM05D005548 ORTHO05D007497 4.0e-164 582.0 394 74.4
AL6G31050 Arabidopsis lyrata HOM05D005548 ORTHO05D007497 4.0e-164 582.0 400 72.5
CARHR193360 Cardamine hirsuta HOM05D005548 ORTHO05D007497 1.5e-163 580.1 477 64.6
Carub.0006s1789 Capsella rubella HOM05D005548 ORTHO05D007497 2.2e-162 576.2 472 64.6
Psat1g042920 Pisum sativum HOM05D005548 ORTHO05D007497 4.2e-161 572.0 472 65.7
Thhalv10013469m.g Eutrema salsugineum HOM05D005548 ORTHO05D007497 9.3e-161 570.9 462 65.4
CDE02G3701 Ceratophyllum demersum HOM05D005548 ORTHO05D007497 6.0e-160 568.2 466 65.9
Sp6g24840 Schrenkiella parvula HOM05D005548 ORTHO05D007497 7.8e-160 567.8 475 64.4
BcaB05g23389 Brassica carinata HOM05D005548 ORTHO05D007497 8.7e-159 564.3 475 62.9
Duzib150G0071 Durio zibethinus HOM05D005548 ORTHO05D007497 1.1e-158 563.9 466 68.0
Aa31LG4G18070 Aethionema arabicum HOM05D005548 ORTHO05D007497 2.5e-158 562.8 473 62.4
A02p05630 Brassica napus HOM05D005548 ORTHO05D007497 4.8e-157 558.5 466 63.1
BraA02t05515Z Brassica rapa HOM05D005548 ORTHO05D007497 4.8e-157 558.5 466 63.1
BolC2t06964H Brassica oleracea HOM05D005548 ORTHO05D007497 1.8e-156 556.6 470 63.4
BcaC03g13685 Brassica carinata HOM05D005548 ORTHO05D007497 3.1e-156 555.8 470 63.2
BNapus_Darmor_BZH_scaffold_38p02320 Brassica napus HOM05D005548 ORTHO05D007497 3.1e-156 555.8 470 63.2
vmacro20704 Vaccinium macrocarpon HOM05D005548 ORTHO05D007497 4.0e-156 555.4 466 63.3
Rhsim01G0095300 Rhododendron simsii HOM05D005548 ORTHO05D007497 1.9e-153 546.6 473 61.7
Hma1.2p1_0518F.1_g171070 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 2.7e-152 542.7 316 87.0
SalBow1G2309 Salvia bowleyana HOM05D005548 ORTHO05D007497 1.3e-141 507.3 346 76.6
Zm00001eb042080 Zea mays HOM05D005548 ORTHO05D007497 2.4e-140 503.1 393 65.4
Os08g0387500 Oryza sativa ssp. japonica HOM05D005548 ORTHO05D007497 5.3e-140 501.9 379 65.7
FAN28G1005 Fragaria x ananassa HOM05D005548 ORTHO05D007497 1.0e-138 497.7 396 70.2
HPP92_019989 Vanilla planifolia HOM05D005548 ORTHO05D004628 4.2e-113 412.5 420 56.7
AUR62021496 Chenopodium quinoa HOM05D005548 ORTHO05D007497 3.5e-107 392.9 275 74.9
Pp3c17_15530 Physcomitrium patens HOM05D005548 ORTHO05D007497 4.2e-105 386.0 411 51.3
Mapoly0115s0052 Marchantia polymorpha HOM05D005548 ORTHO05D007497 9.8e-102 374.8 370 54.3
Pp3c17_15540 Physcomitrium patens HOM05D005548 ORTHO05D007497 9.8e-102 374.8 364 53.6
AagrBONN_evm.TU.Sc2ySwM_344.3922 Anthoceros agrestis HOM05D005548 ORTHO05D007497 1.0e-98 364.8 398 48.5
SEGI_13755 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 3.6e-96 356.3 373 50.1
SMO367G0640 Selaginella moellendorffii HOM05D005548 ORTHO05D007497 8.3e-93 345.1 391 50.6
Rhsim01G0096400 Rhododendron simsii HOM05D005548 ORTHO05D007497 2.7e-83 313.5 341 49.3
SEGI_11261 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 1.2e-80 304.7 321 50.2
CBR_g3024 Chara braunii HOM05D005548 ORTHO05D007497 2.0e-75 287.3 386 45.3
AUR62021498 Chenopodium quinoa HOM05D005548 ORTHO05D007497 7.8e-59 232.3 135 77.8
Ciclev10010350m.g Citrus clementina HOM05D005548 ORTHO05D007497 1.1e-49 201.8 323 44.6
Oeu048670.1 Olea europaea HOM05D005548 ORTHO05D007497 1.7e-42 177.9 98 79.6
Nn8g39172 Nelumbo nucifera HOM05D005548 ORTHO05D007497 2.1e-40 171.0 104 79.8
CSS0011769 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 3.4e-30 137.1 139 61.9
SEGI_23308 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 3.4e-30 137.1 284 35.2
CSS0016063 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 2.9e-29 134.0 84 88.1
SEGI_35049 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 8.4e-29 132.5 255 36.1
CSS0042262 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 1.4e-28 131.7 84 86.9
arahy.Tifrunner.gnm1.ann1.VN1956 Arachis hypogaea HOM05D005548 ORTHO05D007497 9.3e-28 129.0 144 59.0
Dinv06981 Davidia involucrata HOM05D005548 ORTHO05D045157 1.2e-27 128.6 90 80.0
CSS0021555 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 2.5e-25 120.9 73 82.2
CSS0008802 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 9.6e-25 119.0 130 58.5
Ah.12g056490 Amaranthus hybridus HOM05D005548 ORTHO05D007497 4.1e-23 113.6 82 72.0
MCO02G293 Micromonas commoda HOM05D005548 ORTHO05D007497 1.2e-19 102.1 384 25.8
CSS0008633 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 2.0e-14 84.7 73 65.8
SalBow1G1492 Salvia bowleyana HOM05D005548 ORTHO05D007497 1.4e-12 78.6 119 42.9
Lsat_1_v5_gn_5_96001 Lactuca sativa HOM05D005548 ORTHO05D029961 3.1e-07 60.8 108 41.7


User provided reference genes

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