Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41599 Davidia involucrata HOM05D000011 ORTHO05D009225 5.0e-97 357.8 188 100.0
Hma1.2p1_1853F.1_g305390 Hydrangea macrophylla HOM05D000011 ORTHO05D009225 1.2e-13 80.9 76 52.6
Hma1.2p1_2292F.1_g319090 Hydrangea macrophylla HOM05D000011 ORTHO05D009225 1.2e-13 80.9 76 52.6
Dinv04204 Davidia involucrata HOM05D000011 ORTHO05D009225 1.7e-12 77.0 79 53.2
Dinv36626 Davidia involucrata HOM05D000011 ORTHO05D009225 3.8e-12 75.9 79 45.6
Actinidia20359 Actinidia chinensis HOM05D000011 ORTHO05D000018 2.4e-11 73.2 81 49.4
Hma1.2p1_1508F.1_g287760 Hydrangea macrophylla HOM05D000011 ORTHO05D009225 2.4e-11 73.2 81 48.1
Dinv18871 Davidia involucrata HOM05D000011 ORTHO05D009225 5.4e-11 72.0 81 49.4
Actinidia20361 Actinidia chinensis HOM05D000011 ORTHO05D009225 7.1e-11 71.6 81 48.1
Actinidia20356 Actinidia chinensis HOM05D000011 ORTHO05D009225 9.3e-11 71.2 81 49.4
CSS0000624 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D009225 1.0e-09 67.8 79 46.8
Hma1.2p1_0518F.1_g171160 Hydrangea macrophylla HOM05D000011 ORTHO05D009225 2.3e-09 66.6 79 41.8
Nn1g07753 Nelumbo nucifera HOM05D000011 ORTHO05D000018 3.9e-09 65.9 81 48.1
Nn1g07755 Nelumbo nucifera HOM05D000011 ORTHO05D000018 5.1e-09 65.5 81 44.4
Actinidia20368 Actinidia chinensis HOM05D000011 ORTHO05D009225 1.5e-08 63.9 65 53.8
Dinv36628 Davidia involucrata HOM05D000011 ORTHO05D009225 1.5e-08 63.9 64 60.9
Rhsim05G0154300 Rhododendron simsii HOM05D000011 ORTHO05D009225 2.5e-08 63.2 79 45.6
Rhsim05G0157000 Rhododendron simsii HOM05D000011 ORTHO05D009225 4.3e-08 62.4 79 45.6
Rhsim05G0157200 Rhododendron simsii HOM05D000011 ORTHO05D009225 4.3e-08 62.4 79 45.6
Actinidia20355 Actinidia chinensis HOM05D000011 ORTHO05D009225 9.6e-08 61.2 77 46.8
CSS0048866 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D009225 9.6e-08 61.2 83 43.4
QL05p066331 Quercus lobata HOM05D000011 ORTHO05D000018 1.3e-07 60.8 91 40.7
Rhsim05G0158800 Rhododendron simsii HOM05D000011 ORTHO05D009225 1.3e-07 60.8 79 44.3
Actinidia20360 Actinidia chinensis HOM05D000011 ORTHO05D009225 1.6e-07 60.5 77 45.5
Oeu018382.1 Olea europaea HOM05D000011 ORTHO05D009225 1.6e-07 60.5 73 41.1
TAR381G1226 Trochodendron aralioides HOM05D000011 ORTHO05D000018 6.2e-07 58.5 91 39.6
MBI15_g26847_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 8.1e-07 58.2 82 37.8
MBI15_g32218_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 1.4e-06 57.4 75 38.7
Rhsim03G0242600 Rhododendron simsii HOM05D000011 ORTHO05D009225 1.4e-06 57.4 79 39.2
RhsimUnG0197000 Rhododendron simsii HOM05D000011 ORTHO05D009225 1.4e-06 57.4 79 39.2
TAR376G1063 Trochodendron aralioides HOM05D000011 ORTHO05D000018 1.4e-06 57.4 113 34.5
Dinv29833 Davidia involucrata HOM05D000011 ORTHO05D000018 1.8e-06 57.0 84 40.5
CSS0020460 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D009225 2.4e-06 56.6 81 40.7
CAN.G650.44 Capsicum annuum HOM05D000011 ORTHO05D000018 2.4e-06 56.6 61 49.2
Nitab4.5_0003796g0040 Nicotiana tabacum HOM05D000011 ORTHO05D009225 2.4e-06 56.6 79 43.0
Rhsim03G0242700 Rhododendron simsii HOM05D000011 ORTHO05D009225 2.4e-06 56.6 79 39.2
Rhsim05G0158000 Rhododendron simsii HOM05D000011 ORTHO05D009225 2.4e-06 56.6 79 40.5
CSS0002249 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D009225 3.1e-06 56.2 81 42.0
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 3.1e-06 56.2 31 83.9
Hma1.2p1_3410F.1_g335880 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 3.1e-06 56.2 91 35.2
Oeu018381.1 Olea europaea HOM05D000011 ORTHO05D009225 3.1e-06 56.2 73 39.7
TAR055G0005 Trochodendron aralioides HOM05D000011 ORTHO05D000018 3.1e-06 56.2 91 39.6
MBI15_g43333_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 4.0e-06 55.8 83 38.6
Manes.10G022450 Manihot esculenta HOM05D000011 ORTHO05D000018 4.0e-06 55.8 92 38.0
Oeu032119.3 Olea europaea HOM05D000011 ORTHO05D009225 4.0e-06 55.8 79 39.2
CAN.G650.37 Capsicum annuum HOM05D000011 ORTHO05D000018 5.3e-06 55.5 87 36.8
MBI15_g24991_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 5.3e-06 55.5 82 37.8
Manes.09G034700 Manihot esculenta HOM05D000011 ORTHO05D000018 5.3e-06 55.5 80 41.2
Nitab4.5_0001822g0050 Nicotiana tabacum HOM05D000011 ORTHO05D009225 5.3e-06 55.5 81 40.7
Nitab4.5_0009808g0010 Nicotiana tabacum HOM05D000011 ORTHO05D009225 5.3e-06 55.5 79 41.8
CAN.G650.40 Capsicum annuum HOM05D000011 ORTHO05D000018 6.9e-06 55.1 87 36.8
MBI15_g16381_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 6.9e-06 55.1 78 39.7
GSVIVG01015394001 Vitis vinifera HOM05D000011 ORTHO05D009225 6.9e-06 55.1 44 59.1
CSS0019280 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D009225 9.0e-06 54.7 82 39.0
COL.COLO4_22384 Corchorus olitorius HOM05D000011 ORTHO05D000018 9.0e-06 54.7 81 37.0
Dinv29835 Davidia involucrata HOM05D000011 ORTHO05D000018 9.0e-06 54.7 85 41.2
Gorai.007G324600 Gossypium raimondii HOM05D000011 ORTHO05D000018 9.0e-06 54.7 94 41.5
MBI14_g45516_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 9.0e-06 54.7 72 40.3
MBI15_g32190_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 9.0e-06 54.7 81 35.8
MBI15_g35993_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 9.0e-06 54.7 81 35.8
TAR628G1037 Trochodendron aralioides HOM05D000011 ORTHO05D000018 9.0e-06 54.7 117 33.3


User provided reference genes

Program Settings