Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41445 Davidia involucrata HOM05D003361 ORTHO05D003760 7.5e-103 378.3 307 100.0
Dinv36449 Davidia involucrata HOM05D003361 ORTHO05D003760 1.1e-82 311.2 222 88.3
TAR383G0111 Trochodendron aralioides HOM05D003361 ORTHO05D003760 9.0e-72 275.0 307 81.8
GSVIVG01017472001 Vitis vinifera HOM05D003361 ORTHO05D003760 2.4e-69 266.9 222 79.7
TAR626G1829 Trochodendron aralioides HOM05D003361 ORTHO05D003760 5.4e-69 265.8 307 80.8
Atru.chr7.2012 Acer truncatum HOM05D003361 ORTHO05D003760 1.6e-68 264.2 307 81.1
CiPaw.01G250600 Carya illinoinensis HOM05D003361 ORTHO05D003760 3.9e-67 259.6 222 77.9
Thecc.06G033100 Theobroma cacao HOM05D003361 ORTHO05D003760 5.1e-67 259.2 222 77.9
Cpa.g.sc46.67 Carica papaya HOM05D003361 ORTHO05D003760 8.7e-67 258.5 222 78.8
Hma1.2p1_0461F.1_g157700 Hydrangea macrophylla HOM05D003361 ORTHO05D003760 1.1e-66 258.1 170 76.5
Haze_16605 Corylus avellana HOM05D003361 ORTHO05D003760 1.5e-66 257.7 170 74.1
COL.COLO4_11855 Corchorus olitorius HOM05D003361 ORTHO05D003760 1.6e-65 254.2 223 76.7
Lj9A497T71 Lonicera japonica HOM05D003361 ORTHO05D003760 1.6e-65 254.2 222 79.3
GSVIVG01012857001 Vitis vinifera HOM05D003361 ORTHO05D003760 2.1e-65 253.8 222 77.9
Dinv30637 Davidia involucrata HOM05D003361 ORTHO05D003760 2.8e-65 253.4 222 77.5
CSS0014218 Camellia sinensis var. sinensis HOM05D003361 ORTHO05D003760 6.2e-65 252.3 222 77.9
Actinidia15974 Actinidia chinensis HOM05D003361 ORTHO05D003760 8.1e-65 251.9 222 77.9
CiPaw.02G158600 Carya illinoinensis HOM05D003361 ORTHO05D003760 4.0e-64 249.6 304 79.9
Rhsim12G0189300 Rhododendron simsii HOM05D003361 ORTHO05D003760 4.0e-64 249.6 170 72.9
Hund00496 Selenicereus undatus HOM05D003361 ORTHO05D003760 5.3e-64 249.2 222 77.0
RcHm_v2.0_Chr2g0134401 Rosa chinensis HOM05D003361 ORTHO05D003760 6.9e-64 248.8 307 69.1
Lj4g0018391 Lotus japonicus HOM05D003361 ORTHO05D003760 9.0e-64 248.4 304 78.9
Nn8g39646 Nelumbo nucifera HOM05D003361 ORTHO05D003760 9.0e-64 248.4 305 80.7
QL05p032608 Quercus lobata HOM05D003361 ORTHO05D003760 9.0e-64 248.4 302 79.8
Ciclev10025249m.g Citrus clementina HOM05D003361 ORTHO05D003760 2.0e-63 247.3 302 81.8
Thecc.09G137400 Theobroma cacao HOM05D003361 ORTHO05D003760 2.0e-63 247.3 303 80.2
Oeu029903.1 Olea europaea HOM05D003361 ORTHO05D003760 2.6e-63 246.9 302 80.8
PGR031G1162 Punica granatum HOM05D003361 ORTHO05D003760 2.6e-63 246.9 169 70.4
Duzib235G0043 Durio zibethinus HOM05D003361 ORTHO05D003760 3.4e-63 246.5 222 74.8
Atru.chr1.2849 Acer truncatum HOM05D003361 ORTHO05D003760 4.5e-63 246.1 222 75.7
Cc04_g04660 Coffea canephora HOM05D003361 ORTHO05D003760 4.5e-63 246.1 222 76.1
Prupe.3G092900 Prunus persica HOM05D003361 ORTHO05D003760 4.5e-63 246.1 222 74.3
QL02p090717 Quercus lobata HOM05D003361 ORTHO05D003760 5.8e-63 245.7 170 69.4
Gohir.A08G090300 Gossypium hirsutum HOM05D003361 ORTHO05D003760 7.6e-63 245.4 222 76.6
SalBow7G0810 Salvia bowleyana HOM05D003361 ORTHO05D003760 1.7e-62 244.2 222 73.4
SalBow7G3482 Salvia bowleyana HOM05D003361 ORTHO05D003760 1.7e-62 244.2 222 73.4
EL10Ac8g18785 Beta vulgaris HOM05D003361 ORTHO05D003760 2.2e-62 243.8 308 79.5
Duzib160G0541 Durio zibethinus HOM05D003361 ORTHO05D003760 2.9e-62 243.4 222 73.9
Potri.006G061700 Populus trichocarpa HOM05D003361 ORTHO05D003760 4.9e-62 242.7 222 76.1
AUR62020008 Chenopodium quinoa HOM05D003361 ORTHO05D003760 6.4e-62 242.3 307 77.2
Aqoxy7G02456 Aquilegia oxysepala HOM05D003361 ORTHO05D003760 8.4e-62 241.9 311 80.4
MBI14_g24987_MAGBIO Magnolia biondii HOM05D003361 ORTHO05D003760 1.1e-61 241.5 222 77.9
AUR62011226 Chenopodium quinoa HOM05D003361 ORTHO05D003760 1.4e-61 241.1 307 77.5
CANSAT11G0288 Cannabis sativa HOM05D003361 ORTHO05D003760 2.4e-61 240.4 222 56.3
Sopen03g036300 Solanum pennellii HOM05D003361 ORTHO05D003760 2.4e-61 240.4 222 74.3
Lalb_Chr12g0198401 Lupinus albus HOM05D003361 ORTHO05D003760 4.2e-61 239.6 223 66.4
Manes.14G119228 Manihot esculenta HOM05D003361 ORTHO05D003760 4.2e-61 239.6 169 68.6
Nn2g12188 Nelumbo nucifera HOM05D003361 ORTHO05D003760 4.2e-61 239.6 164 73.2
Gohir.D08G101300 Gossypium hirsutum HOM05D003361 ORTHO05D003760 5.5e-61 239.2 222 76.1
Gorai.004G109300 Gossypium raimondii HOM05D003361 ORTHO05D003760 5.5e-61 239.2 222 76.1
Sc08g0006030 Simmondsia chinensis HOM05D003361 ORTHO05D003760 7.1e-61 238.8 307 79.8
COL.COLO4_33367 Corchorus olitorius HOM05D003361 ORTHO05D003760 9.3e-61 238.4 316 67.4
vmacro16874 Vaccinium macrocarpon HOM05D003361 ORTHO05D003760 9.3e-61 238.4 222 74.8
Manes.11G061100 Manihot esculenta HOM05D003361 ORTHO05D003760 1.6e-60 237.7 222 76.6
Solyc03g117420.4 Solanum lycopersicum HOM05D003361 ORTHO05D003760 1.6e-60 237.7 222 74.3
MSTRG.22764 Avicennia marina HOM05D003361 ORTHO05D003760 2.1e-60 237.3 222 73.4
Gohir.D10G079000 Gossypium hirsutum HOM05D003361 ORTHO05D003760 3.5e-60 236.5 222 73.4
Gorai.011G085800 Gossypium raimondii HOM05D003361 ORTHO05D003760 3.5e-60 236.5 222 73.4
TWI75G0489 Tripterygium wilfordii HOM05D003361 ORTHO05D003760 3.5e-60 236.5 304 78.9
FAN09G2631 Fragaria x ananassa HOM05D003361 ORTHO05D003760 4.6e-60 236.1 222 72.1
Sabra06G0044400 Salix brachista HOM05D003361 ORTHO05D003760 4.6e-60 236.1 222 74.3
FAN05G3872 Fragaria x ananassa HOM05D003361 ORTHO05D003760 6.0e-60 235.7 222 72.1
Gohir.A10G072100 Gossypium hirsutum HOM05D003361 ORTHO05D003760 7.9e-60 235.3 222 73.9
Migut.I00738 Erythranthe guttata HOM05D003361 ORTHO05D003760 1.0e-59 235.0 303 78.2
FvH4_6g29180 Fragaria vesca HOM05D003361 ORTHO05D003760 1.3e-59 234.6 222 71.6
Hund21595 Selenicereus undatus HOM05D003361 ORTHO05D003760 1.8e-59 234.2 223 75.8
FAN14G3167 Fragaria x ananassa HOM05D003361 ORTHO05D003760 3.0e-59 233.4 222 71.2
CAN.G407.25 Capsicum annuum HOM05D003361 ORTHO05D003760 8.7e-59 231.9 222 73.9
CANSAT56G3261 Cannabis sativa HOM05D003361 ORTHO05D003760 1.1e-58 231.5 307 75.9
THA.LOC104808198 Tarenaya hassleriana HOM05D003361 ORTHO05D003760 1.1e-58 231.5 222 72.1
Nitab4.5_0001017g0020 Nicotiana tabacum HOM05D003361 ORTHO05D003760 1.9e-58 230.7 305 76.7
Lsat_1_v5_gn_5_8861 Lactuca sativa HOM05D003361 ORTHO05D003760 2.5e-58 230.3 170 68.2
MD02G1018400 Malus domestica HOM05D003361 ORTHO05D003760 2.5e-58 230.3 223 75.8
Peaxi162Scf00332g00127 Petunia axillaris HOM05D003361 ORTHO05D003760 2.5e-58 230.3 222 73.0
arahy.Tifrunner.gnm1.ann1.NFA80P Arachis hypogaea HOM05D003361 ORTHO05D003760 4.3e-58 229.6 222 73.0
CsaV3_7G032160 Cucumis sativus L. HOM05D003361 ORTHO05D003760 4.3e-58 229.6 222 52.7
FAN02G1685 Fragaria x ananassa HOM05D003361 ORTHO05D003760 4.3e-58 229.6 222 71.6
Glyma.08G214500 Glycine max HOM05D003361 ORTHO05D003760 4.3e-58 229.6 222 72.1
AL1G27850 Arabidopsis lyrata HOM05D003361 ORTHO05D003760 5.6e-58 229.2 222 72.1
Carub.0001s1551 Capsella rubella HOM05D003361 ORTHO05D003760 5.6e-58 229.2 222 71.6
Glyma.13G163500 Glycine max HOM05D003361 ORTHO05D003760 5.6e-58 229.2 306 77.8
Medtr4g116170 Medicago truncatula HOM05D003361 ORTHO05D003760 5.6e-58 229.2 222 72.5
MELO3C023445.2 Cucumis melo HOM05D003361 ORTHO05D003760 7.4e-58 228.8 222 53.2
TWI32G1011 Tripterygium wilfordii HOM05D003361 ORTHO05D003760 7.4e-58 228.8 222 72.5
Thhalv10007169m.g Eutrema salsugineum HOM05D003361 ORTHO05D003760 9.6e-58 228.4 222 70.3
Phvul.010G157600 Phaseolus vulgaris HOM05D003361 ORTHO05D003760 9.6e-58 228.4 222 72.5
TWI12G0888 Tripterygium wilfordii HOM05D003361 ORTHO05D003760 9.6e-58 228.4 305 77.7
Aa31LG7G360 Aethionema arabicum HOM05D003361 ORTHO05D003760 1.3e-57 228.0 222 71.6
Manes.04G108700 Manihot esculenta HOM05D003361 ORTHO05D003760 1.3e-57 228.0 222 74.8
THA.LOC104812464 Tarenaya hassleriana HOM05D003361 ORTHO05D003760 2.1e-57 227.3 222 72.5
ClCG09G003110 Citrullus lanatus HOM05D003361 ORTHO05D003760 2.8e-57 226.9 222 61.3
Glyma.07G028300 Glycine max HOM05D003361 ORTHO05D003760 2.8e-57 226.9 222 71.2
Prupe.7G252400 Prunus persica HOM05D003361 ORTHO05D003760 2.8e-57 226.9 171 69.6
Ca_21637_v3 Cicer arietinum L. HOM05D003361 ORTHO05D003760 3.7e-57 226.5 223 71.7
Nitab4.5_0002322g0060 Nicotiana tabacum HOM05D003361 ORTHO05D003760 3.7e-57 226.5 170 65.9
CARHR016230 Cardamine hirsuta HOM05D003361 ORTHO05D003760 6.2e-57 225.7 222 71.2
MD15G1162400 Malus domestica HOM05D003361 ORTHO05D003760 6.2e-57 225.7 171 69.0
Psat7g257800 Pisum sativum HOM05D003361 ORTHO05D003760 6.2e-57 225.7 222 71.2
SGA_v2.0_scaffold37G14747 Striga asiatica HOM05D003361 ORTHO05D003760 1.4e-56 224.6 172 66.9
Sp1g14030 Schrenkiella parvula HOM05D003361 ORTHO05D003760 1.8e-56 224.2 222 71.2
arahy.Tifrunner.gnm1.ann1.JM4LQW Arachis hypogaea HOM05D003361 ORTHO05D003760 2.4e-56 223.8 222 71.6
Glyma.17G107400 Glycine max HOM05D003361 ORTHO05D003760 4.0e-56 223.0 309 76.1
VMungo0331G0010 Vigna mungo HOM05D003361 ORTHO05D003760 4.0e-56 223.0 216 73.1
HanXRQChr17g0570311 Helianthus annuus HOM05D003361 ORTHO05D003760 5.3e-56 222.6 307 74.6
Lj3g0011414 Lotus japonicus HOM05D003361 ORTHO05D003760 5.3e-56 222.6 170 64.7
RcHm_v2.0_Chr2g0087081 Rosa chinensis HOM05D003361 ORTHO05D003760 5.3e-56 222.6 224 72.3
AT1G15740 Arabidopsis thaliana HOM05D003361 ORTHO05D003760 6.9e-56 222.2 170 67.1
arahy.Tifrunner.gnm1.ann1.MWAB5B Arachis hypogaea HOM05D003361 ORTHO05D003760 6.9e-56 222.2 169 65.1
DCAR_025527 Daucus carota HOM05D003361 ORTHO05D003760 6.9e-56 222.2 222 51.8
MSTRG.11160 Avicennia marina HOM05D003361 ORTHO05D003760 9.0e-56 221.9 307 73.9
BcaC05g25516 Brassica carinata HOM05D003361 ORTHO05D003760 1.5e-55 221.1 222 71.6
Lalb_Chr01g0012261 Lupinus albus HOM05D003361 ORTHO05D003760 2.0e-55 220.7 222 71.2
ECA246G4877 Erigeron canadensis HOM05D003361 ORTHO05D003760 2.6e-55 220.3 224 73.2
ATR0767G175 Amborella trichopoda HOM05D003361 ORTHO05D003760 3.4e-55 219.9 222 70.7
Psat0s571g0080 Pisum sativum HOM05D003361 ORTHO05D003760 3.4e-55 219.9 222 70.3
Ca_12515_v3 Cicer arietinum L. HOM05D003361 ORTHO05D003760 5.8e-55 219.2 222 70.3
arahy.Tifrunner.gnm1.ann1.H7Z4S8 Arachis hypogaea HOM05D003361 ORTHO05D003760 7.6e-55 218.8 222 69.4
BraA06t24343Z Brassica rapa HOM05D003361 ORTHO05D003760 1.3e-54 218.0 222 70.7
Eucgr.J03087 Eucalyptus grandis HOM05D003361 ORTHO05D003760 1.7e-54 217.6 222 71.2
A06p11730 Brassica napus HOM05D003361 ORTHO05D003760 2.2e-54 217.2 222 70.7
FAN28G0525 Fragaria x ananassa HOM05D003361 ORTHO05D003760 2.2e-54 217.2 225 71.6
Ah.09g224100 Amaranthus hybridus HOM05D003361 ORTHO05D003760 2.9e-54 216.9 223 70.4
FvH4_1g02020 Fragaria vesca HOM05D003361 ORTHO05D003760 2.9e-54 216.9 226 72.6
TPR.G7990 Trifolium pratense HOM05D003361 ORTHO05D003760 2.9e-54 216.9 223 61.4
arahy.Tifrunner.gnm1.ann1.T3C7Q8 Arachis hypogaea HOM05D003361 ORTHO05D003760 4.9e-54 216.1 222 60.8
Sed0016861 Sechium edule HOM05D003361 ORTHO05D003760 4.9e-54 216.1 222 64.9
Peaxi162Scf00088g00618 Petunia axillaris HOM05D003361 ORTHO05D003760 6.5e-54 215.7 168 63.1
C05p13880 Brassica napus HOM05D003361 ORTHO05D003760 8.4e-54 215.3 222 70.7
BolC5t30122H Brassica oleracea HOM05D003361 ORTHO05D003760 8.4e-54 215.3 222 70.7
Peaxi162Scf01694g00019 Petunia axillaris HOM05D003361 ORTHO05D003760 1.4e-53 214.5 170 61.8
HPP92_017331 Vanilla planifolia HOM05D003361 ORTHO05D003760 1.2e-52 211.5 171 66.1
TPR.G38632 Trifolium pratense HOM05D003361 ORTHO05D003760 1.6e-52 211.1 170 61.2
CAN.G1281.4 Capsicum annuum HOM05D003361 ORTHO05D003760 4.6e-52 209.5 170 61.8
Solyc07g007420.3 Solanum lycopersicum HOM05D003361 ORTHO05D003760 7.9e-52 208.8 170 61.2
Sopen07g003470 Solanum pennellii HOM05D003361 ORTHO05D003760 7.9e-52 208.8 170 61.2
Medtr4g009873 Medicago truncatula HOM05D003361 ORTHO05D003760 1.3e-51 208.0 168 61.3
Phvul.003G172400 Phaseolus vulgaris HOM05D003361 ORTHO05D003760 8.7e-51 205.3 302 75.5
FAN19G1251 Fragaria x ananassa HOM05D002026 ORTHO05D002291 1.9e-50 204.1 221 71.5
Solyc12g009870.2 Solanum lycopersicum HOM05D003361 ORTHO05D003760 2.5e-50 203.8 170 60.6
PSO017G3211 Papaver somniferum HOM05D003361 ORTHO05D003760 4.3e-50 203.0 316 73.1
PGSC0003DMG400030688 Solanum tuberosum HOM05D003361 ORTHO05D003760 4.3e-50 203.0 170 60.6
PGSC0003DMG400007912 Solanum tuberosum HOM05D003361 ORTHO05D003760 9.6e-50 201.8 170 60.6
Nitab4.5_0002286g0090 Nicotiana tabacum HOM05D003361 ORTHO05D003760 1.6e-49 201.1 170 60.0
Psat1g109200 Pisum sativum HOM05D003361 ORTHO05D003760 2.8e-49 200.3 221 49.8
PSO170G6803 Papaver somniferum HOM05D003361 ORTHO05D003760 5.3e-48 196.1 229 65.5
SHI02098 Sapria himalayana HOM05D003361 ORTHO05D003760 2.0e-47 194.1 170 60.0
Cc06_g07660 Coffea canephora HOM05D003361 ORTHO05D003760 4.5e-47 193.0 170 58.8
CDE05G0968 Ceratophyllum demersum HOM05D003361 ORTHO05D003760 8.4e-46 188.7 176 58.5
Nitab4.5_0008536g0030 Nicotiana tabacum HOM05D003361 ORTHO05D003760 6.1e-44 182.6 170 57.1
SEGI_28212 Sequoiadendron giganteum HOM05D003361 ORTHO05D003760 7.9e-44 182.2 177 54.2
Zm00001eb078100 Zea mays HOM05D003361 ORTHO05D003760 1.3e-43 181.4 172 55.8
Nitab4.5_0002329g0140 Nicotiana tabacum HOM05D003361 ORTHO05D003760 2.3e-43 180.6 170 55.3
Os02g0613200 Oryza sativa ssp. japonica HOM05D003361 ORTHO05D003760 1.5e-42 177.9 227 63.4
Zm00001eb247040 Zea mays HOM05D003361 ORTHO05D003760 2.8e-41 173.7 169 53.8
Os04g0503500 Oryza sativa ssp. japonica HOM05D003361 ORTHO05D003760 4.8e-41 172.9 173 55.5
Lsat_1_v5_gn_4_88160 Lactuca sativa HOM05D003361 ORTHO05D003988 1.4e-37 161.4 117 68.4
HanXRQChr09g0274781 Helianthus annuus HOM05D003361 ORTHO05D003760 3.2e-37 160.2 172 52.9
Pp3c4_3150 Physcomitrium patens HOM05D003361 ORTHO05D003760 3.2e-37 160.2 231 57.1
unitig_699.g19089 Utricularia gibba HOM05D003361 ORTHO05D003760 6.1e-36 156.0 225 44.0
MD17G1217000 Malus domestica HOM05D003361 ORTHO05D003760 2.0e-34 151.0 147 81.0
Lj3g0027196 Lotus japonicus HOM05D003361 ORTHO05D003760 2.5e-34 150.6 171 67.3
AagrBONN_evm.TU.Sc2ySwM_362.1382 Anthoceros agrestis HOM05D003361 ORTHO05D003760 5.7e-34 149.4 231 56.3
Sed0010441 Sechium edule HOM05D003361 ORTHO05D003760 5.7e-34 149.4 229 55.5
Nitab4.5_0009284g0020 Nicotiana tabacum HOM05D003361 ORTHO05D003760 9.7e-34 148.7 119 63.9
Pp3c8_1510 Physcomitrium patens HOM05D003361 ORTHO05D003760 1.1e-32 145.2 178 45.5
Duzib187G1093 Durio zibethinus HOM05D003361 ORTHO05D003760 1.4e-32 144.8 147 74.1
Glyma.13G367200 Glycine max HOM05D003361 ORTHO05D003760 3.1e-32 143.7 210 61.4
Duzib150G0304 Durio zibethinus HOM05D003361 ORTHO05D003760 1.7e-30 137.9 147 71.4
SMO200G0229 Selaginella moellendorffii HOM05D003361 ORTHO05D003760 2.2e-30 137.5 222 36.9
Mapoly0032s0095 Marchantia polymorpha HOM05D003361 ORTHO05D003760 8.5e-30 135.6 230 42.6
arahy.Tifrunner.gnm1.ann1.TB3UR8 Arachis hypogaea HOM05D003361 ORTHO05D003760 1.5e-26 124.8 213 40.8
arahy.Tifrunner.gnm1.ann1.YII6YD Arachis hypogaea HOM05D003361 ORTHO05D003760 1.5e-26 124.8 213 40.8
SGA_v2.0_scaffold11G05885 Striga asiatica HOM05D003361 ORTHO05D003760 4.0e-19 100.1 133 48.1
Glyma.15G006200 Glycine max HOM05D003361 ORTHO05D003760 2.0e-15 87.8 93 53.8
Psat0s520g0120 Pisum sativum HOM05D003361 ORTHO05D003760 5.0e-14 83.2 109 54.1
CAN.G509.10 Capsicum annuum HOM05D003361 ORTHO05D003760 5.2e-11 73.2 50 68.0
RcHm_v2.0_Chr1g0325881 Rosa chinensis HOM05D003361 ORTHO05D003760 1.3e-09 68.6 66 51.5
MD17G1216900 Malus domestica HOM05D003361 ORTHO05D003760 2.2e-09 67.8 58 55.2
SGA_v2.0_scaffold38G14981 Striga asiatica HOM05D003361 ORTHO05D003760 2.2e-09 67.8 103 48.5
Oeu027837.1 Olea europaea HOM05D003361 ORTHO05D003760 3.7e-09 67.0 99 82.8
Actinidia08955 Actinidia chinensis HOM05D003361 ORTHO05D003760 1.6e-07 61.6 99 81.8
RcHm_v2.0_Chr6g0252571 Rosa chinensis HOM05D003361 ORTHO05D003760 8.5e-06 55.8 61 47.5


User provided reference genes

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