Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 5.0e-64 247.7 130 100.0
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 2.8e-51 205.3 109 89.0
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 7.0e-50 200.7 130 80.8
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 2.0e-49 199.1 128 79.7
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 1.7e-48 196.1 107 86.0
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 3.9e-48 194.9 107 85.0
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 3.9e-48 194.9 128 75.8
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 3.6e-46 188.3 107 81.3
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 6.1e-46 187.6 110 81.8
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 1.0e-45 186.8 111 81.1
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 3.1e-45 185.3 136 72.8
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 4.0e-45 184.9 111 79.3
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 5.2e-45 184.5 131 75.6
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 1.2e-44 183.3 129 71.3
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 2.6e-44 182.2 106 79.2
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 2.6e-44 182.2 110 80.0
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 3.4e-44 181.8 110 78.2
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 9.8e-44 180.3 112 81.2
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 9.8e-44 180.3 128 74.2
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 9.8e-44 180.3 106 80.2
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 1.3e-43 179.9 110 77.3
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 1.7e-43 179.5 111 78.4
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.7e-43 179.5 107 76.6
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 2.2e-43 179.1 127 74.0
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 2.2e-43 179.1 108 79.6
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 2.2e-43 179.1 125 75.2
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.9e-43 178.7 125 68.8
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 2.9e-43 178.7 108 77.8
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 4.9e-43 177.9 108 76.9
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 6.4e-43 177.6 108 78.7
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 1.1e-42 176.8 105 76.2
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 1.4e-42 176.4 132 67.4
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 1.9e-42 176.0 99 81.8
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 2.4e-42 175.6 130 70.8
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 4.1e-42 174.9 108 76.9
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 9.2e-42 173.7 111 78.4
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 1.2e-41 173.3 105 75.2
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 1.2e-41 173.3 128 68.8
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 1.6e-41 172.9 109 76.1
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 1.6e-41 172.9 107 74.8
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 1.6e-41 172.9 108 77.8
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 2.7e-41 172.2 111 77.5
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 2.7e-41 172.2 111 77.5
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 3.5e-41 171.8 109 76.1
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 7.8e-41 170.6 133 67.7
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 7.8e-41 170.6 133 67.7
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 3.0e-40 168.7 121 68.6
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 3.0e-40 168.7 106 74.5
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 3.9e-40 168.3 108 74.1
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 5.0e-40 167.9 100 76.0
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 1.1e-39 166.8 107 76.6
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 2.5e-39 165.6 110 70.9
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 7.3e-39 164.1 106 74.5
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 9.5e-39 163.7 110 70.9
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 2.8e-38 162.2 130 69.2
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 8.0e-38 160.6 100 74.0
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 8.0e-38 160.6 100 74.0
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.1e-37 160.2 107 70.1
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 1.4e-37 159.8 94 74.5
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 3.1e-37 158.7 107 72.0
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 6.8e-37 157.5 127 66.1
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 6.8e-37 157.5 123 62.6
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 8.9e-37 157.1 108 71.3
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 4.4e-36 154.8 107 66.4
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 7.5e-36 154.1 102 68.6
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 1.7e-35 152.9 107 66.4
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 1.7e-35 152.9 124 64.5
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 2.2e-35 152.5 128 66.4
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 2.2e-35 152.5 110 64.5
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 2.9e-35 152.1 148 54.7
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 3.7e-35 151.8 110 68.2
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 6.4e-35 151.0 107 69.2
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 1.1e-34 150.2 127 63.8
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 1.1e-34 150.2 129 62.0
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 1.1e-34 150.2 122 63.9
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 1.1e-34 150.2 104 66.3
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 1.4e-34 149.8 129 61.2
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 2.4e-34 149.1 126 62.7
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 2.4e-34 149.1 109 65.1
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 3.2e-34 148.7 81 82.7
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 4.1e-34 148.3 123 65.0
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 4.1e-34 148.3 108 64.8
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 7.0e-34 147.5 123 65.0
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 1.2e-33 146.7 114 63.2
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 1.2e-33 146.7 110 61.8
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 3.5e-33 145.2 83 80.7
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 3.5e-33 145.2 83 80.7
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 3.5e-33 145.2 111 64.9
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 4.6e-33 144.8 127 63.0
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 7.8e-33 144.1 111 64.0
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 1.0e-32 143.7 110 60.9
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 1.0e-32 143.7 113 62.8
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 1.0e-32 143.7 108 63.9
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 1.3e-32 143.3 111 62.2
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 1.3e-32 143.3 111 64.0
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 1.3e-32 143.3 111 64.0
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 1.3e-32 143.3 111 64.0
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 1.3e-32 143.3 111 64.0
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 1.3e-32 143.3 83 79.5
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 1.3e-32 143.3 114 63.2
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 1.3e-32 143.3 108 63.0
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 1.7e-32 142.9 110 60.9
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 3.9e-32 141.7 111 61.3
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 3.9e-32 141.7 98 65.3
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 8.6e-32 140.6 113 63.7
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.1e-31 140.2 148 50.7
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 2.5e-31 139.0 97 69.1
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 5.6e-31 137.9 85 75.3
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 5.6e-31 137.9 85 75.3
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 7.3e-31 137.5 115 60.9
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 4.0e-29 131.7 77 74.0
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 1.5e-28 129.8 110 57.3
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 2.6e-28 129.0 78 74.4
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 9.9e-28 127.1 100 63.0
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 8.6e-24 114.0 68 76.5
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 4.7e-22 108.2 65 75.4
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 1.4e-21 106.7 91 60.4
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 6.8e-21 104.4 68 72.1
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 6.8e-21 104.4 78 56.4
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 2.0e-20 102.8 82 56.1
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 1.4e-18 96.7 66 68.2
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 9.2e-18 94.0 88 63.6
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 1.0e-16 90.5 81 49.4
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 3.0e-16 89.0 66 66.7
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 3.0e-16 89.0 78 51.3
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 1.3e-14 83.6 42 92.9
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 2.4e-13 79.3 79 48.1
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 2.0e-12 76.3 41 85.4
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 3.8e-11 72.0 42 76.2
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 8.4e-11 70.9 41 80.5
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 8.4e-11 70.9 62 56.5
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 4.2e-10 68.6 41 73.2
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 1.3e-08 63.5 66 45.5
MCO04G088 Micromonas commoda HOM05D005630 ORTHO05D006979 1.9e-07 59.7 90 31.1
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 1.3e-06 57.0 34 70.6
Zm00001eb338780 Zea mays HOM05D005630 ORTHO05D006979 8.1e-06 54.3 99 44.4


User provided reference genes

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