Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 1.5e-133 479.6 241 100.0
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 5.9e-111 404.4 233 85.0
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 5.9e-111 404.4 233 85.0
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.0e-98 362.8 227 76.2
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.6e-98 362.5 227 76.7
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 9.8e-98 360.5 227 75.8
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.7e-97 359.8 237 75.5
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 3.9e-94 348.6 235 73.2
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 2.8e-92 342.4 225 73.8
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 2.0e-90 336.3 235 73.6
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 1.3e-89 333.6 230 70.0
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 4.9e-89 331.6 228 71.1
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 7.1e-88 327.8 236 67.8
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 1.6e-87 326.6 229 69.4
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 2.7e-87 325.9 230 69.6
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 1.3e-86 323.6 226 70.8
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 5.1e-86 321.6 223 70.4
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 1.9e-85 319.7 235 67.7
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 5.6e-85 318.2 228 68.0
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 7.3e-85 317.8 227 70.5
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 2.8e-84 315.8 228 66.7
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 4.7e-84 315.1 233 65.7
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 1.1e-83 313.9 236 64.4
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 1.1e-83 313.9 235 65.5
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.3e-83 312.8 227 68.7
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 5.2e-83 311.6 235 67.7
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 1.2e-82 310.5 228 69.3
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 1.5e-82 310.1 235 67.7
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 3.4e-82 308.9 237 67.1
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 3.4e-82 308.9 230 65.7
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 5.8e-82 308.1 224 66.5
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 1.7e-81 306.6 223 66.4
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.7e-81 305.4 203 74.9
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 4.9e-81 305.1 236 63.1
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 1.9e-80 303.1 225 65.3
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 4.1e-80 302.0 236 62.3
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 5.4e-80 301.6 225 64.9
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 1.6e-79 300.1 235 64.7
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 3.5e-79 298.9 235 64.3
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 4.6e-79 298.5 223 65.5
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 1.0e-78 297.4 236 61.9
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.3e-78 296.2 203 72.9
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 6.6e-78 294.7 226 66.8
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 1.9e-77 293.1 235 61.7
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 1.9e-77 293.1 235 61.7
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 3.3e-77 292.4 236 61.4
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 3.3e-77 292.4 235 61.3
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.3e-77 292.0 235 64.7
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 5.6e-77 291.6 229 63.8
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.6e-76 290.0 203 70.4
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 6.2e-76 288.1 230 63.5
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 1.1e-75 287.3 226 60.6
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 1.4e-75 287.0 226 65.5
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 1.4e-75 287.0 233 60.9
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 3.1e-75 285.8 230 62.6
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 8.9e-75 284.3 229 62.4
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 9.9e-74 280.8 241 58.9
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 9.9e-74 280.8 241 58.9
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 4.9e-73 278.5 230 63.5
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 3.2e-72 275.8 237 59.9
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 1.6e-71 273.5 239 59.8
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 2.7e-71 272.7 237 59.1
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 4.6e-71 271.9 235 57.4
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 1.0e-70 270.8 233 60.1
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 1.5e-69 266.9 247 58.7
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 1.5e-69 266.9 246 59.8
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 6.2e-68 261.5 232 59.5
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 1.8e-67 260.0 201 63.2
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 1.2e-66 257.3 227 56.8
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 1.5e-66 256.9 230 57.0
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 2.6e-66 256.1 206 64.6
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 3.4e-66 255.8 245 54.3
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 4.4e-66 255.4 238 55.5
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 2.9e-65 252.7 236 56.4
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 3.8e-65 252.3 216 58.3
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 6.4e-65 251.5 232 55.2
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 8.4e-65 251.1 234 56.4
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 1.9e-64 250.0 241 54.4
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 7.1e-64 248.1 242 54.5
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 9.3e-64 247.7 235 55.3
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 6.0e-63 245.0 240 57.1
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 6.0e-63 245.0 238 55.9
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 5.1e-62 241.9 238 53.8
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 2.5e-61 239.6 226 54.4
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 9.6e-61 237.7 232 56.5
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 1.6e-60 236.9 241 52.3
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 8.1e-60 234.6 242 52.1
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 1.8e-59 233.4 232 53.0
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 1.8e-59 233.4 232 53.0
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 2.4e-59 233.0 241 51.5
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 2.4e-59 233.0 242 51.7
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 4.0e-59 232.3 232 53.4
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 4.0e-59 232.3 238 55.5
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 4.0e-59 232.3 239 54.0
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 5.3e-59 231.9 242 51.7
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 6.9e-59 231.5 242 51.7
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 9.0e-59 231.1 239 51.9
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 1.5e-58 230.3 232 52.6
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 5.8e-58 228.4 236 51.7
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 5.8e-58 228.4 249 52.6
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 1.7e-57 226.9 241 53.5
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 1.4e-51 207.2 240 50.8
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.0e-46 189.5 203 51.7
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 6.3e-44 181.8 128 69.5
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 2.0e-42 176.8 240 40.4
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 5.9e-42 175.3 117 72.6
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 5.9e-42 175.3 218 46.8
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 8.7e-38 161.4 231 38.1
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 1.4e-35 154.1 231 42.4
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 3.1e-35 152.9 226 42.5
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 2.4e-27 126.7 206 39.8
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 1.8e-19 100.5 235 29.4
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 3.7e-12 76.3 43 72.1
QL93p0107_0059 Quercus lobata HOM05D006038 ORTHO05D007547 9.1e-11 71.6 56 53.6
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 2.1e-07 60.5 80 42.5


User provided reference genes

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