Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41325 Davidia involucrata HOM05D005031 ORTHO05D006098 1.6e-81 306.2 174 100.0
vmacro01000 Vaccinium macrocarpon HOM05D005031 ORTHO05D006098 1.5e-68 263.1 174 80.5
Actinidia38656 Actinidia chinensis HOM05D005031 ORTHO05D006098 3.2e-66 255.4 174 78.7
Rhsim03G0261100 Rhododendron simsii HOM05D005031 ORTHO05D006098 4.2e-66 255.0 196 71.9
Hma1.2p1_1493F.1_g286836 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 2.1e-65 252.7 174 71.8
CSS0024126 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 1.0e-64 250.4 172 77.3
CSS0012616 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 1.3e-64 250.0 172 77.3
Actinidia33308 Actinidia chinensis HOM05D005031 ORTHO05D006098 2.3e-64 249.2 174 78.7
Duzib168G1565 Durio zibethinus HOM05D005031 ORTHO05D006098 3.3e-63 245.4 174 69.5
Duzib187G1655 Durio zibethinus HOM05D005031 ORTHO05D006098 3.3e-63 245.4 174 69.0
Duzib187G0728 Durio zibethinus HOM05D005031 ORTHO05D006098 9.7e-63 243.8 174 68.4
Manes.06G033000 Manihot esculenta HOM05D005031 ORTHO05D006098 9.7e-63 243.8 174 72.4
COL.COLO4_10074 Corchorus olitorius HOM05D005031 ORTHO05D006098 1.3e-62 243.4 174 69.5
Hma1.2p1_2438F.1_g322190 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 1.7e-62 243.0 143 81.1
Gohir.D08G098400 Gossypium hirsutum HOM05D005031 ORTHO05D006098 2.2e-62 242.7 174 69.5
Gohir.A08G087500 Gossypium hirsutum HOM05D005031 ORTHO05D006098 6.3e-62 241.1 174 69.0
Oeu031856.2 Olea europaea HOM05D005031 ORTHO05D006098 6.3e-62 241.1 174 65.5
Thecc.09G157500 Theobroma cacao HOM05D005031 ORTHO05D006098 6.3e-62 241.1 174 68.4
Gorai.004G106100 Gossypium raimondii HOM05D005031 ORTHO05D006098 8.2e-62 240.7 174 69.0
Oeu045637.1 Olea europaea HOM05D005031 ORTHO05D006098 3.1e-61 238.8 174 65.5
TAR636G0261 Trochodendron aralioides HOM05D005031 ORTHO05D006098 9.1e-61 237.3 171 72.5
Potri.018G101100 Populus trichocarpa HOM05D005031 ORTHO05D006098 1.2e-60 236.9 174 66.7
Rhsim03G0260600 Rhododendron simsii HOM05D005031 ORTHO05D006098 1.2e-60 236.9 239 59.0
Atru.chr12.1707 Acer truncatum HOM05D005031 ORTHO05D006098 1.5e-60 236.5 174 74.1
Ciclev10012924m.g Citrus clementina HOM05D005031 ORTHO05D006098 1.5e-60 236.5 174 67.2
SalBow1G8617 Salvia bowleyana HOM05D005031 ORTHO05D006098 2.0e-60 236.1 174 73.6
Hma1.2p1_2290F.1_g319050 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 2.6e-60 235.7 174 66.1
Nn8g40193 Nelumbo nucifera HOM05D005031 ORTHO05D006098 4.5e-60 235.0 174 65.5
SGA_v2.0_scaffold12G06032 Striga asiatica HOM05D005031 ORTHO05D006098 4.5e-60 235.0 174 74.1
QL01p011713 Quercus lobata HOM05D005031 ORTHO05D006098 3.8e-59 231.9 173 74.6
CiPaw.06G050600 Carya illinoinensis HOM05D005031 ORTHO05D006098 5.0e-59 231.5 174 69.0
Nitab4.5_0001036g0100 Nicotiana tabacum HOM05D005031 ORTHO05D006098 5.0e-59 231.5 174 71.3
MSTRG.10716 Avicennia marina HOM05D005031 ORTHO05D006098 8.5e-59 230.7 174 75.3
Migut.K00291 Erythranthe guttata HOM05D005031 ORTHO05D006098 8.5e-59 230.7 174 71.8
VMungo1215G0734 Vigna mungo HOM05D005031 ORTHO05D006098 1.1e-58 230.3 174 64.9
Atru.chr12.1715 Acer truncatum HOM05D005031 ORTHO05D006098 1.4e-58 229.9 143 74.1
GSVIVG01033204001 Vitis vinifera HOM05D005031 ORTHO05D006098 1.4e-58 229.9 174 64.9
Cc06_g14310 Coffea canephora HOM05D005031 ORTHO05D006098 1.9e-58 229.6 174 71.8
Nitab4.5_0002545g0040 Nicotiana tabacum HOM05D005031 ORTHO05D006098 1.9e-58 229.6 174 70.7
Hund18050 Selenicereus undatus HOM05D005031 ORTHO05D006098 1.9e-58 229.6 174 66.1
Solyc07g006150.3 Solanum lycopersicum HOM05D005031 ORTHO05D006098 1.9e-58 229.6 174 70.1
Sopen07g002260 Solanum pennellii HOM05D005031 ORTHO05D006098 1.9e-58 229.6 174 70.1
TWI73G0469 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 2.5e-58 229.2 174 64.9
Phvul.003G152700 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 3.2e-58 228.8 174 64.4
FvH4_3g25860 Fragaria vesca HOM05D005031 ORTHO05D006098 5.5e-58 228.0 174 64.4
FAN11G2096 Fragaria x ananassa HOM05D005031 ORTHO05D006098 5.5e-58 228.0 174 64.4
RcHm_v2.0_Chr4g0405231 Rosa chinensis HOM05D005031 ORTHO05D006098 5.5e-58 228.0 174 63.8
Phvul.010G125500 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 7.2e-58 227.6 174 63.8
EL10Ac7g17961 Beta vulgaris HOM05D005031 ORTHO05D006098 9.4e-58 227.3 174 64.4
Medtr4g130180 Medicago truncatula HOM05D005031 ORTHO05D006098 9.4e-58 227.3 174 64.4
CAN.G1190.6 Capsicum annuum HOM05D005031 ORTHO05D006098 1.2e-57 226.9 174 62.6
Glyma.02G207700 Glycine max HOM05D005031 ORTHO05D006098 1.2e-57 226.9 174 63.2
Glyma.17G070000 Glycine max HOM05D005031 ORTHO05D006098 1.6e-57 226.5 174 63.2
FAN21G1649 Fragaria x ananassa HOM05D005031 ORTHO05D006098 2.7e-57 225.7 174 63.8
FAN25G2017 Fragaria x ananassa HOM05D005031 ORTHO05D006098 2.7e-57 225.7 174 63.8
MD00G1059200 Malus domestica HOM05D005031 ORTHO05D006098 3.6e-57 225.3 174 63.8
MD00G1091200 Malus domestica HOM05D005031 ORTHO05D006098 3.6e-57 225.3 174 63.8
Ca_21160_v3 Cicer arietinum L. HOM05D005031 ORTHO05D006098 7.9e-57 224.2 174 62.6
Lj6g0018969 Lotus japonicus HOM05D005031 ORTHO05D006098 7.9e-57 224.2 174 63.8
TPR.G1244 Trifolium pratense HOM05D005031 ORTHO05D006098 7.9e-57 224.2 174 62.1
PGSC0003DMG400011218 Solanum tuberosum HOM05D005031 ORTHO05D006098 1.0e-56 223.8 174 69.0
Sed0023985 Sechium edule HOM05D005031 ORTHO05D006098 1.4e-56 223.4 174 63.2
RcHm_v2.0_Chr5g0047191 Rosa chinensis HOM05D005031 ORTHO05D006098 1.8e-56 223.0 174 62.6
Sabra18G0087000 Salix brachista HOM05D005031 ORTHO05D006098 1.8e-56 223.0 194 58.8
arahy.Tifrunner.gnm1.ann1.QFVN2V Arachis hypogaea HOM05D005031 ORTHO05D006098 2.3e-56 222.6 174 63.8
ClCG11G012690 Citrullus lanatus HOM05D005031 ORTHO05D006098 3.9e-56 221.9 174 66.7
MELO3C004109.2 Cucumis melo HOM05D005031 ORTHO05D006098 3.9e-56 221.9 174 64.9
CsaV3_2G007780 Cucumis sativus L. HOM05D005031 ORTHO05D006098 5.1e-56 221.5 174 60.9
ATR0580G158 Amborella trichopoda HOM05D005031 ORTHO05D006098 6.7e-56 221.1 174 62.1
Prupe.1G100400 Prunus persica HOM05D005031 ORTHO05D006098 6.7e-56 221.1 174 61.5
PGR031G2537 Punica granatum HOM05D005031 ORTHO05D006098 6.7e-56 221.1 174 63.2
Eucgr.H00166 Eucalyptus grandis HOM05D005031 ORTHO05D006098 2.6e-55 219.2 174 62.6
Lalb_Chr07g0180011 Lupinus albus HOM05D005031 ORTHO05D006098 4.4e-55 218.4 175 63.4
ECA234G3840 Erigeron canadensis HOM05D005031 ORTHO05D006098 5.7e-55 218.0 174 64.4
PSO478G0084 Papaver somniferum HOM05D005031 ORTHO05D006098 2.2e-54 216.1 174 61.5
Aqoxy5G00990 Aquilegia oxysepala HOM05D005031 ORTHO05D006098 3.7e-54 215.3 171 68.4
CANSAT11G2524 Cannabis sativa HOM05D005031 ORTHO05D006098 3.7e-54 215.3 174 60.9
Peaxi162Scf00038g00324 Petunia axillaris HOM05D005031 ORTHO05D006098 3.7e-54 215.3 174 60.9
HPP92_025776 Vanilla planifolia HOM05D005031 ORTHO05D006098 3.7e-54 215.3 174 62.1
HanXRQChr10g0307831 Helianthus annuus HOM05D005031 ORTHO05D006098 6.3e-54 214.5 174 65.5
Thhalv10026393m.g Eutrema salsugineum HOM05D005031 ORTHO05D006098 8.2e-54 214.2 174 60.3
BcaNung00560 Brassica carinata HOM05D005031 ORTHO05D006098 1.1e-53 213.8 174 59.8
BcaNung00561 Brassica carinata HOM05D005031 ORTHO05D006098 1.1e-53 213.8 174 59.8
C07p57970 Brassica napus HOM05D005031 ORTHO05D006098 1.1e-53 213.8 174 59.8
BolC7t46255H Brassica oleracea HOM05D005031 ORTHO05D006098 1.1e-53 213.8 174 59.8
PSO017G4787 Papaver somniferum HOM05D005031 ORTHO05D006098 1.1e-53 213.8 174 60.3
THA.LOC104819960 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 1.4e-53 213.4 174 58.0
A03p59910 Brassica napus HOM05D005031 ORTHO05D006098 3.1e-53 212.2 174 59.2
Sp7g28380 Schrenkiella parvula HOM05D005031 ORTHO05D006098 5.3e-53 211.5 174 59.2
BraA03t15048Z Brassica rapa HOM05D005031 ORTHO05D006098 6.9e-53 211.1 174 58.6
THA.LOC104803530 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 2.0e-52 209.5 174 58.0
TWI23G1034 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 2.0e-52 209.5 158 63.9
C01p08550 Brassica napus HOM05D005031 ORTHO05D006098 2.6e-52 209.1 174 58.0
CDE05G2574 Ceratophyllum demersum HOM05D005031 ORTHO05D006098 3.4e-52 208.8 174 58.0
Hma1.2p1_2725F.1_g327560 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 4.5e-52 208.4 122 80.3
Lj4g0007960 Lotus japonicus HOM05D005031 ORTHO05D006098 4.5e-52 208.4 175 58.3
AL4G13970 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 7.7e-52 207.6 174 59.2
AL7G21640 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 2.9e-51 205.7 174 58.6
PSO675G4517 Papaver somniferum HOM05D005031 ORTHO05D006098 2.9e-51 205.7 174 58.0
A01p07680 Brassica napus HOM05D005031 ORTHO05D006098 5.0e-51 204.9 174 56.9
AT2G23940 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 6.5e-51 204.5 174 57.5
BraA01t00711Z Brassica rapa HOM05D005031 ORTHO05D006098 6.5e-51 204.5 173 56.6
Carub.0004s0310 Capsella rubella HOM05D005031 ORTHO05D006098 6.5e-51 204.5 174 57.5
arahy.Tifrunner.gnm1.ann1.0TL0BP Arachis hypogaea HOM05D005031 ORTHO05D006098 8.5e-51 204.1 198 55.1
Aa31LG2G20010 Aethionema arabicum HOM05D005031 ORTHO05D006098 1.4e-50 203.4 174 56.9
BcaC09g51840 Brassica carinata HOM05D005031 ORTHO05D006098 1.4e-50 203.4 174 56.9
Sc05g0001840 Simmondsia chinensis HOM05D005031 ORTHO05D006098 7.2e-50 201.1 122 73.8
BolC1t00831H Brassica oleracea HOM05D005031 ORTHO05D006098 2.7e-49 199.1 143 65.7
BolC1t00834H Brassica oleracea HOM05D005031 ORTHO05D006098 2.7e-49 199.1 143 65.7
BolC1t00837H Brassica oleracea HOM05D005031 ORTHO05D006098 2.7e-49 199.1 143 65.7
CARHR184610 Cardamine hirsuta HOM05D005031 ORTHO05D006098 2.7e-49 199.1 143 65.7
AT4G30500 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 2.3e-48 196.1 174 57.5
Zm00001eb186920 Zea mays HOM05D005031 ORTHO05D006098 1.1e-47 193.7 175 55.4
Psat0s2826g0160 Pisum sativum HOM05D005031 ORTHO05D006098 8.2e-46 187.6 122 70.5
MBI14_g16418_MAGBIO Magnolia biondii HOM05D005031 ORTHO05D006098 4.5e-44 181.8 146 62.3
AUR62001168 Chenopodium quinoa HOM05D005031 ORTHO05D006098 9.4e-42 174.1 182 56.6
Lsat_1_v5_gn_5_88201 Lactuca sativa HOM05D005031 ORTHO05D006098 4.7e-41 171.8 141 58.9
Sed0023066 Sechium edule HOM05D005031 ORTHO05D006098 1.5e-39 166.8 147 56.5
AagrBONN_evm.TU.Sc2ySwM_368.3216 Anthoceros agrestis HOM05D005031 ORTHO05D006098 5.7e-39 164.9 143 55.9
Os02g0666800 Oryza sativa ssp. japonica HOM05D005031 ORTHO05D006098 1.7e-38 163.3 175 50.3
Haze_21256 Corylus avellana HOM05D005031 ORTHO05D006098 1.7e-35 153.3 95 74.7
AUR62022155 Chenopodium quinoa HOM05D005031 ORTHO05D006098 3.8e-35 152.1 94 73.4
Ah.08g218880 Amaranthus hybridus HOM05D005031 ORTHO05D006098 5.0e-35 151.8 94 73.4
CBR_g3690 Chara braunii HOM05D005031 ORTHO05D006098 8.5e-35 151.0 134 47.8
Mapoly0003s0226 Marchantia polymorpha HOM05D005031 ORTHO05D006098 7.2e-34 147.9 134 49.3
SMO164G0234 Selaginella moellendorffii HOM05D005031 ORTHO05D006098 7.2e-34 147.9 134 50.0
Cpa.g.sc743.3 Carica papaya HOM05D005031 ORTHO05D006098 8.8e-32 141.0 93 71.0
Pp3c11_17250 Physcomitrium patens HOM05D005031 ORTHO05D006098 5.7e-31 138.3 135 48.9
Lj7A465G52 Lonicera japonica HOM05D005031 ORTHO05D006098 2.9e-27 125.9 78 75.6
BcaNung01743 Brassica carinata HOM05D005031 ORTHO05D006098 1.2e-25 120.6 87 65.5
BcaB04g19089 Brassica carinata HOM05D005031 ORTHO05D006098 2.2e-22 109.8 75 68.0
CARHR238390 Cardamine hirsuta HOM05D005031 ORTHO05D006098 1.1e-21 107.5 97 52.6
unitig_62.g23488 Utricularia gibba HOM05D005031 ORTHO05D006098 1.0e-19 100.9 85 72.9
BcaB08g34788 Brassica carinata HOM05D005031 ORTHO05D006098 6.6e-19 98.2 76 65.8
Cre02.g096850 Chlamydomonas reinhardtii HOM05D005031 ORTHO05D006098 1.5e-18 97.1 131 38.9
MELO3C020438.2 Cucumis melo HOM05D005031 ORTHO05D006098 2.5e-18 96.3 55 76.4
MELO3C010414.2 Cucumis melo HOM05D005031 ORTHO05D006098 5.6e-18 95.1 53 79.2
MELO3C032992.2 Cucumis melo HOM05D005031 ORTHO05D006098 4.4e-15 85.5 48 77.1
PRCOL_00004780 Prasinoderma coloniale HOM05D005031 ORTHO05D006098 7.5e-15 84.7 134 32.1
Rhsim03G0261000 Rhododendron simsii HOM05D005031 ORTHO05D006098 1.4e-13 80.5 76 53.9
MCO15G043 Micromonas commoda HOM05D005031 ORTHO05D006098 1.6e-12 77.0 133 34.6
MELO3C033057.2 Cucumis melo HOM05D005031 ORTHO05D006098 2.0e-12 76.6 38 84.2
MELO3C033061.2 Cucumis melo HOM05D005031 ORTHO05D006098 2.9e-06 56.2 28 82.1


User provided reference genes

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