Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 4.9e-227 790.8 402 100.0
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 7.4e-175 617.5 401 77.6
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 3.7e-166 588.6 383 77.8
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 3.2e-162 575.5 392 74.7
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.6e-156 556.6 377 75.1
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 7.7e-156 554.3 380 72.4
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 1.0e-155 553.9 400 70.8
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 1.1e-154 550.4 387 73.4
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 4.2e-154 548.5 380 71.8
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 5.5e-154 548.1 383 72.6
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 2.1e-153 546.2 372 73.1
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 1.0e-152 543.9 385 70.4
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 2.3e-152 542.7 385 70.6
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 1.5e-151 540.0 380 70.0
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 2.2e-150 536.2 380 69.7
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 2.3e-147 526.2 367 70.8
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 4.3e-146 521.9 384 68.8
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 5.6e-146 521.5 373 68.1
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 1.2e-145 520.4 372 72.0
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.2e-145 520.4 374 69.5
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 3.6e-145 518.8 374 69.3
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 1.0e-144 517.3 373 69.2
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 1.0e-144 517.3 452 61.9
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 1.4e-144 516.9 372 69.1
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 2.3e-144 516.2 381 67.2
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 3.0e-144 515.8 372 68.8
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 4.0e-144 515.4 379 68.1
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 9.8e-143 510.8 377 67.4
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 3.7e-142 508.8 406 64.0
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 3.7e-142 508.8 388 67.5
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 4.9e-142 508.4 373 69.2
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 1.1e-141 507.3 391 66.8
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 4.1e-141 505.4 371 67.9
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 7.0e-141 504.6 377 67.1
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 1.6e-140 503.4 362 68.5
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 1.7e-139 500.0 370 66.2
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 6.6e-139 498.0 384 65.9
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 8.6e-139 497.7 381 66.1
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 2.5e-138 496.1 395 64.3
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 2.5e-138 496.1 375 65.3
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 7.3e-138 494.6 372 68.0
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 1.2e-137 493.8 383 64.5
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 8.0e-137 491.1 383 64.8
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 6.8e-136 488.0 324 74.7
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 5.8e-135 485.0 373 67.6
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 1.7e-134 483.4 372 67.2
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 2.2e-134 483.0 373 67.3
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 1.4e-133 480.3 385 64.2
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 1.9e-133 479.9 371 65.8
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 2.0e-132 476.5 350 68.6
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 3.5e-132 475.7 373 64.6
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 4.6e-132 475.3 373 67.6
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 1.0e-131 474.2 372 66.9
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 2.3e-131 473.0 381 64.3
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 3.0e-131 472.6 377 64.7
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 3.9e-131 472.2 367 67.0
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 1.1e-130 470.7 371 64.4
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 1.1e-130 470.7 371 64.2
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.6e-129 465.7 280 81.4
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 3.6e-129 465.7 378 63.8
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 4.7e-129 465.3 375 64.8
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 6.2e-129 464.9 373 67.6
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 6.8e-128 461.5 389 63.2
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 6.4e-126 454.9 381 59.6
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 8.3e-126 454.5 384 63.0
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 1.4e-125 453.8 381 60.4
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 7.1e-125 451.4 388 59.8
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 4.6e-124 448.7 388 59.8
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 7.8e-124 448.0 287 74.9
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 2.3e-123 446.4 381 59.6
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 3.9e-123 445.7 342 67.0
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 5.1e-123 445.3 383 60.6
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 8.6e-123 444.5 344 64.0
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 1.1e-122 444.1 376 59.3
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 1.5e-122 443.7 382 59.4
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 1.2e-121 440.7 381 59.1
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 2.1e-121 439.9 370 60.8
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 2.8e-121 439.5 372 60.5
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 6.4e-118 428.3 379 60.2
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 8.4e-118 427.9 372 59.1
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 1.9e-117 426.8 383 60.1
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 3.2e-117 426.0 372 58.9
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 4.1e-117 425.6 372 58.6
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 1.6e-116 423.7 388 55.7
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 8.6e-115 417.9 303 67.7
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 1.5e-114 417.2 339 62.8
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 9.6e-114 414.5 386 58.5
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 4.7e-113 412.1 353 62.6
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 4.6e-108 395.6 264 73.1
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 3.0e-107 392.9 345 59.1
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 4.3e-106 389.0 345 58.8
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 5.3e-104 382.1 291 64.6
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 2.6e-103 379.8 249 75.9
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 1.3e-102 377.5 239 76.2
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 3.8e-102 375.9 314 63.4
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 4.6e-100 369.0 404 50.0
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.5e-98 364.0 214 80.8
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 1.6e-97 360.5 287 62.0
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 1.1e-93 347.8 347 54.5
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 1.9e-93 347.1 311 56.3
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 6.7e-91 338.6 180 86.1
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 5.6e-90 335.5 369 50.1
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 1.2e-87 327.8 171 88.3
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 1.7e-86 323.9 328 49.7
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 4.9e-86 322.4 297 58.6
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 1.5e-79 300.8 288 54.9
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 5.5e-61 239.2 232 58.2
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 1.7e-57 227.6 326 41.1
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.2e-47 194.9 146 62.3
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 8.5e-46 188.7 262 43.5
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 6.3e-41 172.6 140 64.3
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 6.3e-41 172.6 205 46.3
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 5.9e-39 166.0 192 49.5
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 3.8e-38 163.3 257 41.2
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 1.4e-27 128.3 71 85.9
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 1.2e-20 105.1 106 53.8
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 2.3e-14 84.3 49 75.5
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 3.6e-12 77.0 55 65.5
Nn2g16007 Nelumbo nucifera HOM05D006491 ORTHO05D008412 1.4e-11 75.1 70 60.0


User provided reference genes

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