Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 2.5e-299 1031.6 598 100.0
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 3.2e-198 695.7 588 69.7
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 3.3e-110 403.3 601 45.8
CSS0049336 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 2.1e-104 384.0 568 45.8
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 2.1e-96 357.5 660 41.7
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 3.8e-90 336.7 646 39.8
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 9.3e-89 332.0 585 42.6
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 2.3e-87 327.4 627 42.6
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 3.0e-87 327.0 588 43.4
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 1.3e-85 321.6 623 41.1
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 2.4e-81 307.4 611 39.1
CSS0049604 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 1.6e-80 304.7 574 40.4
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 5.8e-75 286.2 600 37.8
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 2.2e-74 284.3 581 40.3
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 2.5e-73 280.8 595 38.2
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 1.9e-70 271.2 594 39.4
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 3.3e-70 270.4 586 37.4
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 3.7e-69 266.9 582 38.3
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 2.4e-68 264.2 587 37.6
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 6.5e-66 256.1 594 38.0
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 2.1e-64 251.1 603 34.0
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 2.5e-62 244.2 567 38.4
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 3.3e-62 243.8 589 38.9
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 1.1e-60 238.8 609 36.3
SGA_v2.0_scaffold41G15805 Striga asiatica HOM05D005890 ORTHO05D006717 6.9e-60 236.1 639 32.6
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 1.2e-59 235.3 561 37.8
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.9e-57 228.0 596 35.1
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 3.2e-57 227.3 611 34.0
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 7.2e-57 226.1 596 35.4
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 1.2e-56 225.3 585 33.7
Ciclev10008727m.g Citrus clementina HOM05D005890 ORTHO05D006717 1.2e-56 225.3 363 48.2
ECA240G0208 Erigeron canadensis HOM05D005890 ORTHO05D006717 4.6e-56 223.4 580 36.4
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.4e-55 221.9 596 33.9
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 1.5e-54 218.4 609 33.3
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 2.2e-53 214.5 598 34.8
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 1.8e-52 211.5 601 34.8
SGA_v2.0_scaffold392G50652 Striga asiatica HOM05D005890 ORTHO05D006717 3.1e-52 210.7 215 57.7
Atru.chr7.926 Acer truncatum HOM05D005890 ORTHO05D006717 4.1e-52 210.3 205 58.5
Aqoxy7G02888 Aquilegia oxysepala HOM05D005890 ORTHO05D006717 9.1e-52 209.1 241 50.6
Nitab4.5_0000028g0410 Nicotiana tabacum HOM05D005890 ORTHO05D006717 3.4e-51 207.2 580 33.1
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 4.5e-51 206.8 590 33.9
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 7.7e-51 206.1 585 34.2
Oeu063100.1 Olea europaea HOM05D005890 ORTHO05D006717 1.0e-50 205.7 194 61.9
Atru.BG.17.p Acer truncatum HOM05D005890 ORTHO05D006717 3.8e-50 203.8 578 32.4
CAN.G403.1 Capsicum annuum HOM05D005890 ORTHO05D006717 6.5e-50 203.0 549 32.6
PGSC0003DMG400019897 Solanum tuberosum HOM05D005890 ORTHO05D006717 1.1e-49 202.2 604 31.6
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 1.1e-49 202.2 562 33.6
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 1.6e-48 198.4 587 32.9
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 2.7e-48 197.6 599 32.9
Sopen07g004220 Solanum pennellii HOM05D005890 ORTHO05D006717 6.1e-48 196.4 608 30.8
Glyma.17G058000 Glycine max HOM05D005890 ORTHO05D006717 3.9e-47 193.7 559 32.0
Nitab4.5_0004916g0020 Nicotiana tabacum HOM05D005890 ORTHO05D006717 1.5e-46 191.8 607 31.0
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 1.5e-46 191.8 603 32.7
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 9.7e-46 189.1 589 34.0
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 1.7e-45 188.3 597 32.8
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 2.8e-45 187.6 679 31.5
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 2.8e-45 187.6 588 31.0
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 3.7e-45 187.2 587 31.2
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 4.8e-45 186.8 143 67.1
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 6.3e-45 186.4 586 32.3
Solyc07g008330.3 Solanum lycopersicum HOM05D005890 ORTHO05D006717 6.3e-45 186.4 581 30.6
Migut.L01872 Erythranthe guttata HOM05D005890 ORTHO05D006717 4.1e-44 183.7 271 45.8
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 9.1e-44 182.6 169 61.5
ATR1098G092 Amborella trichopoda HOM05D005890 ORTHO05D006717 2.6e-43 181.0 592 32.8
CiPaw.08G031700 Carya illinoinensis HOM05D005890 ORTHO05D006717 4.5e-43 180.3 531 35.2
Sed0024384 Sechium edule HOM05D005890 ORTHO05D006717 5.0e-42 176.8 560 32.9
ECA234G0353 Erigeron canadensis HOM05D005890 ORTHO05D006717 1.9e-41 174.9 119 73.9
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 2.5e-41 174.5 586 31.1
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 4.2e-41 173.7 589 33.3
Lsat_1_v5_gn_5_83860 Lactuca sativa HOM05D005890 ORTHO05D006717 2.1e-40 171.4 113 76.1
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 8.0e-40 169.5 594 30.5
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 1.0e-39 169.1 134 68.7
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 3.0e-39 167.5 580 29.5
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 8.8e-39 166.0 586 30.0
unitig_8.g3553 Utricularia gibba HOM05D005890 ORTHO05D006717 2.0e-38 164.9 306 40.2
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 4.4e-38 163.7 133 67.7
AUR62027422 Chenopodium quinoa HOM05D005890 ORTHO05D006717 5.7e-38 163.3 597 31.0
AUR62031274 Chenopodium quinoa HOM05D005890 ORTHO05D006717 5.7e-38 163.3 200 52.5
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 9.7e-38 162.5 125 70.4
CDE02G0471 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 1.7e-37 161.8 612 29.2
TAR637G0001 Trochodendron aralioides HOM05D005890 ORTHO05D006717 3.7e-37 160.6 87 87.4
MD13G1240600 Malus domestica HOM05D005890 ORTHO05D006717 4.8e-37 160.2 572 32.9
CDE05G3513 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 2.4e-36 157.9 222 42.8
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 4.1e-36 157.1 170 58.2
PSO170G0082 Papaver somniferum HOM05D005890 ORTHO05D006717 5.3e-36 156.8 99 75.8
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 7.0e-36 156.4 108 74.1
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 9.1e-36 156.0 125 68.8
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 9.1e-36 156.0 606 29.5
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 2.0e-35 154.8 138 65.2
PSO063G0609 Papaver somniferum HOM05D005890 ORTHO05D006717 3.5e-35 154.1 113 69.0
BcaB08g36002 Brassica carinata HOM05D005890 ORTHO05D006717 4.5e-35 153.7 120 66.7
Os12g0613500 Oryza sativa ssp. japonica HOM05D005890 ORTHO05D006717 7.7e-35 152.9 255 43.5
HPP92_018699 Vanilla planifolia HOM05D005890 ORTHO05D006717 1.3e-34 152.1 551 29.0
EL10Ac8g19296 Beta vulgaris HOM05D005890 ORTHO05D006717 3.8e-34 150.6 599 30.9
Sabra18G0114500 Salix brachista HOM05D005890 ORTHO05D006717 5.0e-34 150.2 538 33.5
SEGI_20539 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 6.5e-34 149.8 106 70.8
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 1.1e-33 149.1 129 62.0
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 1.5e-33 148.7 129 62.0
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 7.2e-33 146.4 139 61.2
Ah.14g085350 Amaranthus hybridus HOM05D005890 ORTHO05D006717 1.2e-32 145.6 216 45.4
MBI14_g15782_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 2.7e-32 144.4 289 40.1
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 3.6e-32 144.1 113 67.3
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 3.6e-32 144.1 113 67.3
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 3.6e-32 144.1 113 67.3
BcaC04g20011 Brassica carinata HOM05D005890 ORTHO05D006717 6.1e-32 143.3 117 65.0
C09p48820 Brassica napus HOM05D005890 ORTHO05D006717 6.1e-32 143.3 117 65.0
BolC9t57729H Brassica oleracea HOM05D005890 ORTHO05D006717 6.1e-32 143.3 117 65.0
Haze_22044 Corylus avellana HOM05D005890 ORTHO05D006717 3.4e-30 137.5 297 38.0
Psat4g014480 Pisum sativum HOM05D005890 ORTHO05D006717 4.4e-30 137.1 360 33.6
Zm00001eb136110 Zea mays HOM05D005890 ORTHO05D006717 9.8e-30 136.0 195 43.6
Cpa.g.sc115.65 Carica papaya HOM05D005890 ORTHO05D006717 1.7e-29 135.2 453 31.8
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 4.1e-28 130.6 274 38.3
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 3.5e-27 127.5 585 27.4
Mapoly0009s0141 Marchantia polymorpha HOM05D005890 ORTHO05D006717 6.5e-26 123.2 157 47.8
Pp3c3_34440 Physcomitrium patens HOM05D005890 ORTHO05D006717 1.1e-25 122.5 205 43.4
Pp3c3_34441 Physcomitrium patens HOM05D005890 ORTHO05D006717 1.1e-25 122.5 205 43.4
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 4.2e-25 120.6 102 65.7
FvH4_4g06950 Fragaria vesca HOM05D005890 ORTHO05D006717 7.2e-25 119.8 540 29.3
Carub.0008s1762 Capsella rubella HOM05D005890 ORTHO05D006717 1.0e-23 115.9 93 67.7
Zm00001eb172010 Zea mays HOM05D005890 ORTHO05D006717 4.0e-23 114.0 202 36.6
AL8G33040 Arabidopsis lyrata HOM05D005890 ORTHO05D006717 6.8e-23 113.2 102 63.7
AagrBONN_evm.TU.Sc2ySwM_368.973 Anthoceros agrestis HOM05D005890 ORTHO05D006717 1.5e-22 112.1 180 41.1
CBR_g20282 Chara braunii HOM05D000019 ORTHO05D000002 2.2e-21 108.2 73 68.5
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 3.7e-21 107.5 123 52.8
SEGI_22268 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 1.8e-20 105.1 62 80.6
Gohir.D04G007200 Gossypium hirsutum HOM05D005890 ORTHO05D006717 4.4e-14 84.0 533 26.1
DCAR_029041 Daucus carota HOM05D005890 ORTHO05D006717 9.8e-14 82.8 245 35.9
CSS0038668 Camellia sinensis var. sinensis HOM05D014000 ORTHO05D006717 3.7e-13 80.9 80 58.8
Cre01.g055400 Chlamydomonas reinhardtii HOM05D005890 ORTHO05D006717 6.4e-13 80.1 93 54.8
Cpa.g.c33129.1 Carica papaya HOM05D005890 ORTHO05D006717 3.5e-11 74.3 105 47.6
Zm00001eb394450 Zea mays HOM05D014690 ORTHO05D006717 1.3e-10 72.4 55 61.8
Oeu003868.2 Olea europaea HOM05D005890 ORTHO05D006717 2.5e-09 68.2 238 31.9
MCO09G065 Micromonas commoda HOM05D005890 ORTHO05D006717 3.3e-09 67.8 80 53.8
A10p14440 Brassica napus HOM05D005890 ORTHO05D006717 1.1e-07 62.8 34 82.4
BraA10t43535Z Brassica rapa HOM05D005890 ORTHO05D006717 1.1e-07 62.8 34 82.4
MBI14_g15781_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 1.5e-06 58.9 193 29.5


User provided reference genes

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