Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41092 Davidia involucrata HOM05D004716 ORTHO05D005646 0.0e+00 1237.6 630 100.0
Dinv25852 Davidia involucrata HOM05D004716 ORTHO05D005646 3.4e-299 1031.2 630 84.0
Hma1.2p1_0105F.1_g050810 Hydrangea macrophylla HOM05D004716 ORTHO05D005646 1.1e-278 963.0 656 77.7
Haze_17746 Corylus avellana HOM05D004716 ORTHO05D005646 2.6e-267 925.2 634 76.7
Actinidia17798 Actinidia chinensis HOM05D004716 ORTHO05D005646 1.3e-266 922.9 633 76.5
Prupe.8G028200 Prunus persica HOM05D004716 ORTHO05D005646 4.9e-266 921.0 632 75.3
Cfa018329 Carpinus fangiana HOM05D004716 ORTHO05D005646 3.2e-265 918.3 632 76.3
GSVIVG01034512001 Vitis vinifera HOM05D004716 ORTHO05D005646 4.3e-262 907.9 631 75.1
CiPaw.15G016900 Carya illinoinensis HOM05D004716 ORTHO05D005646 5.6e-262 907.5 632 74.8
TAR381G1500 Trochodendron aralioides HOM05D004716 ORTHO05D005646 3.7e-261 904.8 646 73.2
ClCG09G009620 Citrullus lanatus HOM05D004716 ORTHO05D005646 4.5e-259 897.9 633 75.5
MD05G1023700 Malus domestica HOM05D004716 ORTHO05D005646 3.8e-258 894.8 631 74.2
Rhsim06G0090400 Rhododendron simsii HOM05D004716 ORTHO05D005646 3.2e-257 891.7 633 74.9
TAR625G0458 Trochodendron aralioides HOM05D004716 ORTHO05D005646 1.2e-256 889.8 640 73.1
Atru.chr13.2155 Acer truncatum HOM05D004716 ORTHO05D005646 4.3e-254 881.3 644 73.0
Cc10_g14730 Coffea canephora HOM05D004716 ORTHO05D005646 9.6e-254 880.2 645 72.2
Manes.18G091200 Manihot esculenta HOM05D004716 ORTHO05D005646 2.1e-253 879.0 630 73.8
Potri.002G069100 Populus trichocarpa HOM05D004716 ORTHO05D005646 4.8e-253 877.9 638 72.3
Nitab4.5_0008759g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 8.2e-253 877.1 652 71.2
Sed0005850 Sechium edule HOM05D004716 ORTHO05D005646 1.1e-252 876.7 633 73.8
Duzib116G0661 Durio zibethinus HOM05D004716 ORTHO05D005646 2.4e-252 875.5 631 73.1
CANSAT25G0539 Cannabis sativa HOM05D004716 ORTHO05D005646 4.0e-252 874.8 631 72.3
Oeu046025.1 Olea europaea HOM05D004716 ORTHO05D005646 5.3e-252 874.4 631 72.4
CiPaw.16G013500 Carya illinoinensis HOM05D004716 ORTHO05D005646 9.0e-252 873.6 632 72.6
MELO3C023718.2 Cucumis melo HOM05D004716 ORTHO05D005646 1.2e-251 873.2 633 72.7
CsaV3_7G025180 Cucumis sativus L. HOM05D004716 ORTHO05D005646 1.3e-250 869.8 633 72.4
Potri.005G191300 Populus trichocarpa HOM05D004716 ORTHO05D005646 2.2e-250 869.0 630 72.1
MD10G1024300 Malus domestica HOM05D004716 ORTHO05D005646 1.9e-249 865.9 631 72.7
Duzib041G0148 Durio zibethinus HOM05D004716 ORTHO05D005646 2.5e-249 865.5 631 73.1
Thecc.08G149900 Theobroma cacao HOM05D004716 ORTHO05D005646 3.2e-249 865.1 631 72.7
Sabra02G0054300 Salix brachista HOM05D004716 ORTHO05D005646 2.1e-248 862.4 642 69.9
RcHm_v2.0_Chr6g0275661 Rosa chinensis HOM05D004716 ORTHO05D005646 3.5e-248 861.7 630 73.3
TWI34G0952 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 4.6e-248 861.3 632 72.3
Nitab4.5_0000032g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 7.9e-248 860.5 652 69.9
Nn5g28715 Nelumbo nucifera HOM05D004716 ORTHO05D005646 5.1e-247 857.8 647 71.7
FAN27G2333 Fragaria x ananassa HOM05D004716 ORTHO05D005646 6.7e-247 857.4 632 72.2
Sabra05G0146100 Salix brachista HOM05D004716 ORTHO05D005646 6.7e-247 857.4 631 71.8
MBI09_g32373_MAGBIO Magnolia biondii HOM05D004716 ORTHO05D005646 1.1e-246 856.7 622 72.8
Gorai.009G253500 Gossypium raimondii HOM05D004716 ORTHO05D005646 4.3e-246 854.7 633 71.7
FvH4_2g13910 Fragaria vesca HOM05D004716 ORTHO05D005646 5.7e-246 854.4 630 72.1
Migut.N03224 Erythranthe guttata HOM05D004716 ORTHO05D005646 2.8e-245 852.0 653 70.0
Duzib093G0980 Durio zibethinus HOM05D004716 ORTHO05D005646 6.3e-245 850.9 632 71.7
COL.COLO4_37837 Corchorus olitorius HOM05D004716 ORTHO05D005646 1.1e-244 850.1 631 71.6
FAN15G2444 Fragaria x ananassa HOM05D004716 ORTHO05D005646 1.8e-244 849.4 630 71.9
FAN24G2048 Fragaria x ananassa HOM05D004716 ORTHO05D005646 1.8e-244 849.4 630 71.6
Gohir.A05G242900 Gossypium hirsutum HOM05D004716 ORTHO05D005646 3.1e-244 848.6 633 71.4
arahy.Tifrunner.gnm1.ann1.LT68UB Arachis hypogaea HOM05D004716 ORTHO05D005646 5.3e-244 847.8 644 71.6
arahy.Tifrunner.gnm1.ann1.RZZD7S Arachis hypogaea HOM05D004716 ORTHO05D005646 5.3e-244 847.8 644 71.6
FAN20G2258 Fragaria x ananassa HOM05D004716 ORTHO05D005646 4.5e-243 844.7 630 71.6
Sopen04g027280 Solanum pennellii HOM05D004716 ORTHO05D005646 4.5e-243 844.7 663 67.1
TWI60G0041 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 2.9e-242 842.0 632 70.3
Aqoxy5G02106 Aquilegia oxysepala HOM05D004716 ORTHO05D005646 8.5e-242 840.5 639 70.3
Sed0016522 Sechium edule HOM05D004716 ORTHO05D005646 1.4e-241 839.7 630 71.3
Peaxi162Scf00765g00315 Petunia axillaris HOM05D004716 ORTHO05D005646 7.9e-240 833.9 651 68.2
CAN.G268.7 Capsicum annuum HOM05D004716 ORTHO05D005646 3.0e-239 832.0 642 68.4
MSTRG.22371 Avicennia marina HOM05D004716 ORTHO05D005646 2.8e-237 825.5 657 67.1
Ciclev10000573m.g Citrus clementina HOM05D004716 ORTHO05D005646 2.8e-237 825.5 641 69.1
QL02p024060 Quercus lobata HOM05D004716 ORTHO05D005646 4.8e-237 824.7 778 60.3
Gohir.A05G270100 Gossypium hirsutum HOM05D004716 ORTHO05D005646 6.3e-237 824.3 632 70.7
Gorai.009G285100 Gossypium raimondii HOM05D004716 ORTHO05D005646 1.8e-236 822.8 632 70.9
DCAR_001131 Daucus carota HOM05D004716 ORTHO05D005646 9.1e-236 820.5 628 69.4
ECA246G4589 Erigeron canadensis HOM05D004716 ORTHO05D005646 9.1e-236 820.5 618 70.7
HanXRQChr10g0279061 Helianthus annuus HOM05D004716 ORTHO05D005646 4.5e-235 818.1 639 69.3
Solyc04g071320.4 Solanum lycopersicum HOM05D004716 ORTHO05D005646 1.0e-234 817.0 663 65.2
Glyma.10G225500 Glycine max HOM05D004716 ORTHO05D005646 6.5e-234 814.3 628 70.1
Glyma.20G166300 Glycine max HOM05D004716 ORTHO05D005646 3.2e-233 812.0 628 70.2
Lalb_Chr01g0009631 Lupinus albus HOM05D004716 ORTHO05D005646 7.2e-233 810.8 640 68.9
Eucgr.F04241 Eucalyptus grandis HOM05D004716 ORTHO05D005646 1.0e-231 807.0 644 67.9
Phvul.007G079400 Phaseolus vulgaris HOM05D004716 ORTHO05D005646 5.1e-231 804.7 628 70.5
Sed0004003 Sechium edule HOM05D004716 ORTHO05D005646 2.0e-230 802.7 509 79.6
PSO210G2251 Papaver somniferum HOM05D004716 ORTHO05D005646 7.4e-230 800.8 658 65.8
Lj5g0004042 Lotus japonicus HOM05D004716 ORTHO05D005646 1.7e-229 799.7 634 70.0
EL10Ac1g01533 Beta vulgaris HOM05D004716 ORTHO05D005646 2.8e-229 798.9 651 66.5
Lsat_1_v5_gn_6_99641 Lactuca sativa HOM05D004716 ORTHO05D005646 3.7e-229 798.5 643 67.3
AUR62013572 Chenopodium quinoa HOM05D004716 ORTHO05D005646 4.1e-228 795.0 642 66.8
Ca_19935_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 1.2e-227 793.5 633 68.9
Gohir.D05G272200 Gossypium hirsutum HOM05D004716 ORTHO05D005646 2.9e-226 788.9 632 69.0
SalBow7G0781 Salvia bowleyana HOM05D004716 ORTHO05D005646 1.5e-225 786.6 631 66.4
Lj7A371T50 Lonicera japonica HOM05D004716 ORTHO05D005646 3.3e-222 775.4 587 70.5
SGA_v2.0_scaffold25G11175 Striga asiatica HOM05D004716 ORTHO05D005646 2.2e-221 772.7 656 64.9
Gohir.D05G244400 Gossypium hirsutum HOM05D004716 ORTHO05D005646 2.4e-220 769.2 633 66.8
THA.LOC104809692 Tarenaya hassleriana HOM05D004716 ORTHO05D005646 3.1e-220 768.8 601 67.9
AUR62026717 Chenopodium quinoa HOM05D004716 ORTHO05D005646 9.1e-220 767.3 635 65.2
PSO238G0051 Papaver somniferum HOM05D004716 ORTHO05D005646 1.2e-219 766.9 649 63.6
PGR044G2101 Punica granatum HOM05D004716 ORTHO05D005646 2.0e-219 766.1 639 64.8
TPR.G30003 Trifolium pratense HOM05D004716 ORTHO05D005646 4.5e-219 765.0 633 67.1
Ah.05g167860 Amaranthus hybridus HOM05D004716 ORTHO05D005646 5.9e-219 764.6 635 65.2
CSS0049856 Camellia sinensis var. sinensis HOM05D004716 ORTHO05D005646 1.9e-217 759.6 459 82.8
Aa31LG6G9740 Aethionema arabicum HOM05D004716 ORTHO05D005646 5.5e-217 758.1 636 64.3
Thhalv10011324m.g Eutrema salsugineum HOM05D004716 ORTHO05D005646 1.6e-216 756.5 639 64.9
Carub.0001s3471 Capsella rubella HOM05D004716 ORTHO05D005646 9.8e-214 747.3 637 63.7
Nn1g06102 Nelumbo nucifera HOM05D004716 ORTHO05D005646 1.7e-213 746.5 489 76.7
Sp1g32700 Schrenkiella parvula HOM05D004716 ORTHO05D005646 3.7e-213 745.3 643 62.8
AL1G51810 Arabidopsis lyrata HOM05D004716 ORTHO05D005646 3.1e-212 742.3 636 64.2
AT1G43690 Arabidopsis thaliana HOM05D004716 ORTHO05D005646 4.5e-211 738.4 637 63.9
A10p07790 Brassica napus HOM05D004716 ORTHO05D005646 1.3e-210 736.9 630 62.5
TPR.G36694 Trifolium pratense HOM05D004716 ORTHO05D005646 1.3e-210 736.9 591 66.7
BraSC36t46025Z Brassica rapa HOM05D004716 ORTHO05D005646 2.2e-210 736.1 630 62.5
Medtr1g098940 Medicago truncatula HOM05D004716 ORTHO05D005646 2.2e-210 736.1 633 65.6
unitig_62.g23528 Utricularia gibba HOM05D004716 ORTHO05D005646 2.2e-210 736.1 643 62.7
Lj4C695G10 Lonicera japonica HOM05D004716 ORTHO05D005646 1.5e-209 733.4 633 63.5
BcaC08g42816 Brassica carinata HOM05D004716 ORTHO05D005646 2.5e-209 732.6 631 62.8
C06p00280 Brassica napus HOM05D004716 ORTHO05D005646 2.5e-209 732.6 631 62.8
Lalb_Chr06g0161551 Lupinus albus HOM05D004716 ORTHO05D005646 1.0e-207 727.2 626 64.4
BcaB07g33979 Brassica carinata HOM05D004716 ORTHO05D005646 5.2e-207 724.9 634 61.7
SalBow6G6163 Salvia bowleyana HOM05D004716 ORTHO05D005646 2.8e-205 719.2 688 59.4
CDE08G0143 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 8.6e-202 707.6 635 62.0
Migut.C01013 Erythranthe guttata HOM05D004716 ORTHO05D005646 2.5e-201 706.1 634 60.6
CARHR035580 Cardamine hirsuta HOM05D004716 ORTHO05D005646 3.3e-201 705.7 637 60.4
Zm00001eb422340 Zea mays HOM05D004716 ORTHO05D005646 3.4e-190 669.1 635 57.6
Oeu011938.1 Olea europaea HOM05D004716 ORTHO05D005646 6.0e-187 658.3 637 61.1
Cpa.g.sc21.190 Carica papaya HOM05D004716 ORTHO05D005646 7.8e-187 657.9 431 77.5
Ca_25988_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 4.1e-180 635.6 399 77.9
HPP92_019355 Vanilla planifolia HOM05D004716 ORTHO05D005646 5.4e-180 635.2 545 63.1
SGA_v2.0_scaffold24G10374 Striga asiatica HOM05D004716 ORTHO05D005646 3.0e-178 629.4 644 56.5
SHI09390 Sapria himalayana HOM05D004716 ORTHO05D005646 1.5e-177 627.1 490 64.7
Sc02g0004170 Simmondsia chinensis HOM05D004716 ORTHO05D005646 1.7e-173 613.6 456 68.9
ATR0772G093 Amborella trichopoda HOM05D004716 ORTHO05D005646 2.7e-171 606.3 464 66.8
Oeu014493.1 Olea europaea HOM05D004716 ORTHO05D005646 1.4e-167 594.0 364 79.1
SMO331G0079 Selaginella moellendorffii HOM05D004716 ORTHO05D005646 3.1e-167 592.8 630 53.0
Mapoly0014s0164 Marchantia polymorpha HOM05D004716 ORTHO05D005646 1.5e-161 573.9 662 50.5
CDE06G2375 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 2.5e-161 573.2 633 53.6
Pp3c6_18530 Physcomitrium patens HOM05D004716 ORTHO05D005646 1.5e-158 563.9 658 50.2
Pp3c5_6660 Physcomitrium patens HOM05D004716 ORTHO05D005646 9.3e-156 554.7 654 49.5
Psat6g193200 Pisum sativum HOM05D004716 ORTHO05D005646 4.3e-153 545.8 317 84.2
AagrBONN_evm.TU.Sc2ySwM_344.4417 Anthoceros agrestis HOM05D004716 ORTHO05D005646 1.3e-149 534.3 679 46.4
vmacro21155 Vaccinium macrocarpon HOM05D004716 ORTHO05D005646 3.0e-146 523.1 339 76.4
Psat6g193040 Pisum sativum HOM05D004716 ORTHO05D005646 2.5e-145 520.0 302 83.4
Zm00001eb422260 Zea mays HOM05D004716 ORTHO05D005646 1.9e-129 467.2 315 72.1
Os04g0421800 Oryza sativa ssp. japonica HOM05D004716 ORTHO05D005646 7.2e-124 448.7 302 71.9
CBR_g11170 Chara braunii HOM05D004716 ORTHO05D005646 1.8e-122 444.1 662 43.8
HanXRQChr10g0277841 Helianthus annuus HOM05D004716 ORTHO05D005646 3.0e-114 416.8 314 71.3
Zm00001eb422280 Zea mays HOM05D004716 ORTHO05D005646 2.7e-102 377.1 259 69.5
Zm00001eb422320 Zea mays HOM05D004716 ORTHO05D005646 2.7e-102 377.1 259 69.5
Actinidia10653 Actinidia chinensis HOM05D004716 ORTHO05D005646 1.4e-74 285.0 228 68.9
PRCOL_00002924 Prasinoderma coloniale HOM05D004716 ORTHO05D005646 1.2e-54 218.8 350 37.7
VMungo0464G1352 Vigna mungo HOM05D004716 ORTHO05D005646 3.5e-46 190.7 254 52.4
Cpa.g.sc21.191 Carica papaya HOM05D004716 ORTHO05D005646 4.9e-40 170.2 182 59.3
CAN.G309.90 Capsicum annuum HOM05D004716 ORTHO05D005646 4.3e-36 157.1 177 52.5
Actinidia13988 Actinidia chinensis HOM05D004716 ORTHO05D005646 5.8e-33 146.7 87 79.3
Cre06.g286600 Chlamydomonas reinhardtii HOM05D004716 ORTHO05D005646 4.2e-31 140.6 319 32.9
Actinidia10651 Actinidia chinensis HOM05D004716 ORTHO05D005646 2.3e-29 134.8 171 52.0
TAR636G3535 Trochodendron aralioides HOM05D004716 ORTHO05D005646 4.0e-26 124.0 92 72.8
ATR0772G018 Amborella trichopoda HOM05D004716 ORTHO05D005646 5.3e-26 123.6 208 46.2
PRCOL_00004133 Prasinoderma coloniale HOM05D004716 ORTHO05D005646 2.9e-24 117.9 405 29.9
CSS0021208 Camellia sinensis var. sinensis HOM05D004716 ORTHO05D005646 1.1e-20 105.9 160 47.5
Oeu014494.1 Olea europaea HOM05D004716 ORTHO05D005646 7.6e-17 93.2 154 46.8
Ca_25987_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 3.8e-16 90.9 149 45.6
SEGI_31186 Sequoiadendron giganteum HOM05D004716 ORTHO05D005646 1.9e-15 88.6 152 46.7
HanXRQChr10g0277851 Helianthus annuus HOM05D004716 ORTHO05D005646 4.2e-15 87.4 114 52.6
PGSC0003DMG401024092 Solanum tuberosum HOM05D004716 ORTHO05D005646 3.3e-12 77.8 180 38.3
Psat6g193080 Pisum sativum HOM05D000257 ORTHO05D008537 2.4e-10 71.6 71 54.9


User provided reference genes

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