Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41084 Davidia involucrata HOM05D002733 ORTHO05D010023 2.2e-53 212.2 121 100.0
Dinv36151 Davidia involucrata HOM05D002733 ORTHO05D010023 3.4e-46 188.3 109 87.2
Dinv04578 Davidia involucrata HOM05D002733 ORTHO05D010023 1.5e-25 119.8 137 62.0
Potri.001G274000 Populus trichocarpa HOM05D002733 ORTHO05D010023 1.0e-18 97.1 101 52.5
Hma1.2p1_0460F.1_g157570 Hydrangea macrophylla HOM05D002733 ORTHO05D010023 1.2e-16 90.1 105 46.7
Sabra16G0168800 Salix brachista HOM05D002733 ORTHO05D010023 2.3e-15 85.9 102 48.0
Thecc.09G246300 Theobroma cacao HOM05D002733 ORTHO05D010023 2.9e-13 79.0 108 47.2
Medtr5g089100 Medicago truncatula HOM05D002733 ORTHO05D010023 8.3e-13 77.4 129 41.1
Psat0s1289g0080 Pisum sativum HOM05D002733 ORTHO05D010023 8.3e-13 77.4 128 40.6
Dinv36152 Davidia involucrata HOM05D000362 ORTHO05D000325 1.4e-12 76.6 40 90.0
QL01p016685 Quercus lobata HOM05D002733 ORTHO05D010023 7.1e-12 74.3 112 43.8
CiPaw.13G148700 Carya illinoinensis HOM05D002733 ORTHO05D010023 6.0e-11 71.2 114 42.1
Manes.05G200100 Manihot esculenta HOM05D002733 ORTHO05D010023 1.0e-10 70.5 133 36.8
TAR633G0275 Trochodendron aralioides HOM05D002733 ORTHO05D010023 1.3e-10 70.1 100 44.0
TAR369G1143 Trochodendron aralioides HOM05D002733 ORTHO05D010023 2.3e-10 69.3 112 43.8
Peaxi162Scf00004g00424 Petunia axillaris HOM05D018239 ORTHO05D010023 5.1e-10 68.2 101 41.6
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 6.6e-10 67.8 112 45.5
CAN.G468.8 Capsicum annuum HOM05D018239 ORTHO05D010023 8.6e-10 67.4 105 41.9
Gohir.D07G125500 Gossypium hirsutum HOM05D002733 ORTHO05D010023 2.5e-09 65.9 109 39.4
Gorai.001G135300 Gossypium raimondii HOM05D002733 ORTHO05D010023 2.5e-09 65.9 109 39.4
RcHm_v2.0_Chr6g0258931 Rosa chinensis HOM05D002733 ORTHO05D010023 2.5e-09 65.9 115 40.9
Gohir.A07G121200 Gossypium hirsutum HOM05D002733 ORTHO05D010023 3.3e-09 65.5 118 38.1
TPR.G16419 Trifolium pratense HOM05D002733 ORTHO05D010023 3.3e-09 65.5 129 36.4
COL.COLO4_02755 Corchorus olitorius HOM05D002733 ORTHO05D010023 4.3e-09 65.1 103 41.7
LjContig00564g0023278 Lotus japonicus HOM05D002733 ORTHO05D010023 4.3e-09 65.1 113 39.8
Atru.chr3.3004 Acer truncatum HOM05D002733 ORTHO05D010023 5.6e-09 64.7 110 40.9
FAN15G1799 Fragaria x ananassa HOM05D002733 ORTHO05D010023 7.3e-09 64.3 115 42.6
Lalb_Chr10g0106141 Lupinus albus HOM05D002733 ORTHO05D010023 7.3e-09 64.3 107 43.9
FAN20G0750 Fragaria x ananassa HOM05D002733 ORTHO05D010023 9.5e-09 63.9 115 41.7
Ca_06190_v3 Cicer arietinum L. HOM05D002733 ORTHO05D010023 1.2e-08 63.5 108 42.6
Nitab4.5_0007012g0030 Nicotiana tabacum HOM05D018239 ORTHO05D010023 1.6e-08 63.2 118 39.8
FvH4_2g06740 Fragaria vesca HOM05D002733 ORTHO05D010023 2.1e-08 62.8 115 41.7
Potri.009G068200 Populus trichocarpa HOM05D002733 ORTHO05D010023 2.1e-08 62.8 102 40.2
FAN24G3374 Fragaria x ananassa HOM05D002733 ORTHO05D010023 2.8e-08 62.4 116 41.4
Actinidia06978 Actinidia chinensis HOM05D002733 ORTHO05D010023 4.7e-08 61.6 122 36.9
ATR0307G041 Amborella trichopoda HOM05D002733 ORTHO05D010023 4.7e-08 61.6 80 46.2
DCAR_029984 Daucus carota HOM05D002733 ORTHO05D010023 4.7e-08 61.6 100 41.0
Oeu025912.1 Olea europaea HOM05D002733 ORTHO05D010023 1.1e-07 60.5 107 39.3
Prupe.4G260600 Prunus persica HOM05D002733 ORTHO05D010023 1.1e-07 60.5 122 41.8
PGSC0003DMG400009447 Solanum tuberosum HOM05D018239 ORTHO05D010023 1.4e-07 60.1 106 39.6
Ciclev10017459m.g Citrus clementina HOM05D002733 ORTHO05D010023 2.3e-07 59.3 117 35.9
ClCG02G022730 Citrullus lanatus HOM05D002733 ORTHO05D010023 3.1e-07 58.9 103 38.8
MD00G1045800 Malus domestica HOM05D002733 ORTHO05D010023 3.1e-07 58.9 111 36.9
arahy.Tifrunner.gnm1.ann1.88337C Arachis hypogaea HOM05D002733 ORTHO05D010023 4.0e-07 58.5 117 38.5
arahy.Tifrunner.gnm1.ann1.MI3W0U Arachis hypogaea HOM05D002733 ORTHO05D010023 4.0e-07 58.5 117 38.5
TWI79G0642 Tripterygium wilfordii HOM05D002733 ORTHO05D010023 4.0e-07 58.5 135 39.3
MD03G1164300 Malus domestica HOM05D002733 ORTHO05D010023 5.2e-07 58.2 110 39.1
Solyc11g065010.1 Solanum lycopersicum HOM05D018239 ORTHO05D010023 5.2e-07 58.2 102 39.2
Glyma.02G278200 Glycine max HOM05D002733 ORTHO05D010023 6.8e-07 57.8 135 34.1
Migut.D00675 Erythranthe guttata HOM05D002733 ORTHO05D010023 8.9e-07 57.4 101 41.6
FAN27G2498 Fragaria x ananassa HOM05D002733 ORTHO05D010023 8.9e-07 57.4 115 40.0
Phvul.008G202700 Phaseolus vulgaris HOM05D002733 ORTHO05D010023 8.9e-07 57.4 108 41.7
MELO3C014550.2 Cucumis melo HOM05D002733 ORTHO05D010023 2.0e-06 56.2 103 37.9
MBI13_g09212_MAGBIO Magnolia biondii HOM05D002733 ORTHO05D010023 2.0e-06 56.2 99 39.4
Sopen11g024780 Solanum pennellii HOM05D018239 ORTHO05D010023 2.6e-06 55.8 109 38.5
MSTRG.18469 Avicennia marina HOM05D002733 ORTHO05D010023 3.4e-06 55.5 103 43.7
CANSAT54G1196 Cannabis sativa HOM05D002733 ORTHO05D010023 3.4e-06 55.5 118 39.8
PGR102G0853 Punica granatum HOM05D002733 ORTHO05D010023 4.4e-06 55.1 112 37.5
Cfa009898 Carpinus fangiana HOM05D002733 ORTHO05D010023 5.8e-06 54.7 82 45.1
CsaV3_6G038850 Cucumis sativus L. HOM05D002733 ORTHO05D010023 5.8e-06 54.7 103 36.9
Sed0027264 Sechium edule HOM05D002733 ORTHO05D010023 5.8e-06 54.7 75 42.7
Rhsim13G0206300 Rhododendron simsii HOM05D002733 ORTHO05D010023 7.6e-06 54.3 94 38.3


User provided reference genes

Program Settings