Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv41063 Davidia involucrata HOM05D011323 ORTHO05D010674 0.0e+00 1101.3 630 100.0
Actinidia10638 Actinidia chinensis HOM05D016043 ORTHO05D015789 2.1e-59 234.6 415 44.3
Dinv25882 Davidia involucrata HOM05D016043 ORTHO05D010674 2.4e-39 167.9 180 61.7
Haze_17782 Corylus avellana HOM05D015223 ORTHO05D010674 5.1e-37 160.2 523 33.3
Cfa018307 Carpinus fangiana HOM05D015223 ORTHO05D010674 2.5e-36 157.9 536 31.5
Lj4C698G20 Lonicera japonica HOM05D011323 ORTHO05D010674 9.6e-36 156.0 547 30.0
TAR628G0624 Trochodendron aralioides HOM05D013130 ORTHO05D010674 3.8e-32 144.1 622 30.2
CiPaw.16G010100 Carya illinoinensis HOM05D015223 ORTHO05D010674 4.6e-30 137.1 534 29.4
Potri.005G194350 Populus trichocarpa HOM05D015223 ORTHO05D037420 3.1e-26 124.4 637 29.0
Lj7A375T60 Lonicera japonica HOM05D011323 ORTHO05D010674 1.4e-23 115.5 220 42.3
Prupe.8G035200 Prunus persica HOM05D012764 ORTHO05D017940 9.3e-23 112.8 404 34.4
Sopen04g027650 Solanum pennellii HOM05D011323 ORTHO05D010674 1.6e-19 102.1 465 29.7
CSS0012606 Camellia sinensis var. sinensis HOM05D033310 ORTHO05D010674 1.4e-18 99.0 150 44.0
Solyc04g071660.3 Solanum lycopersicum HOM05D011323 ORTHO05D010674 1.4e-18 99.0 466 29.8
PGSC0003DMG400006365 Solanum tuberosum HOM05D011323 ORTHO05D010674 5.3e-18 97.1 550 26.9
Potri.002G066450 Populus trichocarpa HOM05D015223 ORTHO05D037420 1.2e-17 95.9 628 26.3
Thecc.08G155200 Theobroma cacao HOM05D013130 ORTHO05D022454 4.5e-17 94.0 519 27.7
MSTRG.1096 Avicennia marina HOM05D027784 ORTHO05D010674 3.8e-16 90.9 541 27.9
Duzib116G0432 Durio zibethinus HOM05D013130 ORTHO05D022454 2.5e-15 88.2 435 26.2
Cc10_g15040 Coffea canephora HOM05D011323 ORTHO05D010674 6.1e-14 83.6 177 40.1
Nn1g06053 Nelumbo nucifera HOM05D011323 ORTHO05D010674 1.8e-13 82.0 254 31.5
Peaxi162Scf00079g00245 Petunia axillaris HOM05D011323 ORTHO05D010674 6.7e-13 80.1 339 29.2
RcHm_v2.0_Chr6g0274831 Rosa chinensis HOM05D012764 ORTHO05D010674 2.5e-12 78.2 193 33.7
Gohir.D05G245401 Gossypium hirsutum HOM05D013130 ORTHO05D022454 5.7e-12 77.0 285 33.0
Gorai.009G255200 Gossypium raimondii HOM05D013130 ORTHO05D022454 9.7e-12 76.3 285 31.9
HanXRQChr11g0343441 Helianthus annuus HOM05D011323 ORTHO05D010674 9.7e-12 76.3 123 38.2
Gohir.A05G244401 Gossypium hirsutum HOM05D013130 ORTHO05D022454 4.8e-11 73.9 369 27.9
Oeu051274.3 Olea europaea HOM05D027784 ORTHO05D010674 1.1e-10 72.8 548 24.1
Migut.C00977 Erythranthe guttata HOM05D027784 ORTHO05D010674 1.8e-10 72.0 558 23.8
Nitab4.5_0001344g0010 Nicotiana tabacum HOM05D011323 ORTHO05D010674 1.8e-10 72.0 693 24.5
RcHm_v2.0_Chr6g0274911 Rosa chinensis HOM05D012764 ORTHO05D017940 1.5e-09 68.9 149 39.6
Nitab4.5_0001187g0020 Nicotiana tabacum HOM05D011323 ORTHO05D010674 5.9e-09 67.0 655 24.9
Sabra02G0052900 Salix brachista HOM05D015223 ORTHO05D037420 2.9e-08 64.7 675 24.9
DCAR_001148 Daucus carota HOM05D033900 ORTHO05D010674 3.8e-08 64.3 101 41.6
ECA247G3667 Erigeron canadensis HOM05D011323 ORTHO05D010674 8.5e-08 63.2 300 26.3
AUR62040588 Chenopodium quinoa HOM05D018884 ORTHO05D010674 4.2e-07 60.8 114 38.6
PGR044G2651 Punica granatum HOM05D012764 ORTHO05D010674 2.7e-06 58.2 280 25.7
FvH4_2g13350 Fragaria vesca HOM05D012764 ORTHO05D010674 4.6e-06 57.4 148 35.1


User provided reference genes

Program Settings