Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40938 Davidia involucrata HOM05D010100 ORTHO05D006370 1.8e-215 752.3 364 100.0
Dinv36988 Davidia involucrata HOM05D010100 ORTHO05D006370 2.5e-84 316.6 295 51.5
Dinv09219 Davidia involucrata HOM05D010100 ORTHO05D006370 4.3e-81 305.8 295 49.2
Dinv38294 Davidia involucrata HOM05D010100 ORTHO05D006370 1.4e-66 257.7 293 44.7
Dinv13641 Davidia involucrata HOM05D010100 ORTHO05D006370 8.8e-66 255.0 218 59.2
Dinv04932 Davidia involucrata HOM05D010100 ORTHO05D006370 5.3e-55 219.2 178 58.4
Dinv06002 Davidia involucrata HOM05D010100 ORTHO05D006370 1.0e-53 214.9 289 42.6
Dinv07635 Davidia involucrata HOM05D003048 ORTHO05D003418 1.0e-45 188.3 174 48.3
Dinv08590 Davidia involucrata HOM05D010100 ORTHO05D006370 3.0e-42 176.8 130 62.3
Dinv05204 Davidia involucrata HOM05D010100 ORTHO05D006370 8.6e-37 158.7 178 44.9
Dinv07139 Davidia involucrata HOM05D010100 ORTHO05D006370 1.3e-32 144.8 112 58.9
Dinv03783 Davidia involucrata HOM05D010100 ORTHO05D006370 1.6e-27 127.9 161 42.2
Dinv07233 Davidia involucrata HOM05D004981 ORTHO05D005635 4.7e-27 126.3 186 37.6
Dinv04832 Davidia involucrata HOM05D012569 ORTHO05D006370 6.8e-26 122.5 203 31.5
Dinv13643 Davidia involucrata HOM05D010100 ORTHO05D006370 2.0e-25 120.9 107 56.1
Dinv30257 Davidia involucrata HOM05D001880 ORTHO05D004730 9.8e-25 118.6 121 47.9
Dinv02443 Davidia involucrata HOM05D010100 ORTHO05D006370 3.2e-23 113.6 119 47.9
Dinv01405 Davidia involucrata HOM05D010100 ORTHO05D006370 5.4e-23 112.8 113 49.6
Dinv17976 Davidia involucrata HOM05D010100 ORTHO05D006370 2.0e-22 110.9 136 43.4
Dinv05864 Davidia involucrata HOM05D000070 ORTHO05D006627 3.5e-22 110.2 112 50.0
Dinv21997 Davidia involucrata HOM05D013474 ORTHO05D011747 5.0e-21 106.3 105 46.7
Dinv30103 Davidia involucrata HOM05D013474 ORTHO05D011747 2.5e-20 104.0 102 46.1
Dinv03792 Davidia involucrata HOM05D012569 ORTHO05D006370 6.2e-19 99.4 266 25.2
PGSC0003DMG400026721 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.3e-16 91.7 273 26.0
PGSC0003DMG400025637 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.9e-16 90.5 256 26.6
Dinv10884 Davidia involucrata HOM05D025719 ORTHO05D006370 4.6e-14 83.2 178 29.2
CAN.G530.3 Capsicum annuum HOM05D008032 ORTHO05D006370 7.8e-14 82.4 199 25.1
CSS0002684 Camellia sinensis var. sinensis HOM05D000470 ORTHO05D000348 3.0e-13 80.5 73 65.8
Nitab4.5_0000317g0230 Nicotiana tabacum HOM05D008032 ORTHO05D007704 3.9e-13 80.1 116 38.8
Peaxi162Scf01129g00001 Petunia axillaris HOM05D008032 ORTHO05D006370 5.1e-13 79.7 94 41.5
vmacro18690 Vaccinium macrocarpon HOM05D000706 ORTHO05D001554 6.6e-13 79.3 169 30.2
Solyc04g049380.4 Solanum lycopersicum HOM05D000290 ORTHO05D007415 3.3e-12 77.0 141 30.5
Sopen06g008270 Solanum pennellii HOM05D000003 ORTHO05D000004 3.3e-12 77.0 117 33.3
PGSC0003DMG400008733 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.3e-12 77.0 117 35.9
CSS0037151 Camellia sinensis var. sinensis HOM05D000470 ORTHO05D000348 9.5e-12 75.5 53 73.6
CSS0000767 Camellia sinensis var. sinensis HOM05D000470 ORTHO05D000348 2.1e-11 74.3 59 71.2
SHI23486 Sapria himalayana HOM05D006502 ORTHO05D007704 2.8e-11 73.9 115 33.0
SHI09511 Sapria himalayana HOM05D000003 ORTHO05D000004 3.6e-11 73.6 115 33.0
Actinidia10652 Actinidia chinensis HOM05D008877 ORTHO05D006370 8.1e-11 72.4 135 29.6
Dinv03485 Davidia involucrata HOM05D010100 ORTHO05D006370 8.1e-11 72.4 68 50.0
GSVIVG01020820001 Vitis vinifera HOM05D001610 ORTHO05D006370 1.8e-10 71.2 198 24.7
PGSC0003DMG400038517 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.3e-10 70.9 115 34.8
CSS0033353 Camellia sinensis var. sinensis HOM05D000470 ORTHO05D000348 6.8e-10 69.3 53 71.7
Actinidia06679 Actinidia chinensis HOM05D000314 ORTHO05D000189 2.6e-09 67.4 147 28.6
Dinv05287 Davidia involucrata HOM05D010100 ORTHO05D006370 3.4e-09 67.0 83 41.0
Dinv10200 Davidia involucrata HOM05D008877 ORTHO05D006370 8.4e-08 62.4 71 40.8
Dinv38437 Davidia involucrata HOM05D008877 ORTHO05D006370 8.4e-08 62.4 71 40.8
Dinv09236 Davidia involucrata HOM05D013474 ORTHO05D006370 1.4e-07 61.6 67 46.3
Solyc06g036555.1 Solanum lycopersicum HOM05D000017 ORTHO05D006370 4.1e-07 60.1 70 37.1
GSVIVG01002904001 Vitis vinifera HOM05D001447 ORTHO05D006370 2.1e-06 57.8 144 24.3
Nitab4.5_0002192g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.5e-06 57.0 140 27.1
Nitab4.5_0000483g0180 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.6e-06 56.6 140 27.1
Nitab4.5_0001781g0230 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.0e-06 56.2 140 26.4
Nitab4.5_0000571g0100 Nicotiana tabacum HOM05D006502 ORTHO05D007704 7.8e-06 55.8 139 25.9
Nitab4.5_0005403g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 7.8e-06 55.8 139 27.3


User provided reference genes

Program Settings