Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 6.7e-63 243.8 121 100.0
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 1.6e-48 196.1 149 70.5
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 2.1e-48 195.7 147 71.4
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 6.1e-48 194.1 150 68.7
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 3.0e-47 191.8 146 69.9
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 3.0e-47 191.8 147 68.7
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 3.0e-47 191.8 147 68.7
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 4.0e-47 191.4 148 69.6
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 8.8e-47 190.3 147 68.0
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.2e-46 189.9 147 69.4
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 3.4e-46 188.3 147 68.7
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 9.8e-46 186.8 147 66.7
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 1.4e-44 183.0 140 71.4
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 9.1e-44 180.3 148 66.9
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 2.0e-43 179.1 149 66.4
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 3.5e-43 178.3 151 64.2
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 1.0e-42 176.8 150 65.3
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 1.0e-42 176.8 137 67.9
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 2.2e-42 175.6 131 69.5
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 3.8e-42 174.9 148 66.2
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 8.5e-42 173.7 131 68.7
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 8.5e-42 173.7 131 69.5
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 1.5e-41 172.9 155 63.9
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 1.5e-41 172.9 155 63.9
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 1.5e-41 172.9 134 68.7
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 4.2e-41 171.4 158 62.7
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 1.6e-40 169.5 159 61.0
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 2.1e-40 169.1 132 68.2
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 2.8e-40 168.7 153 63.4
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 2.8e-40 168.7 153 63.4
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 2.8e-40 168.7 165 60.6
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 3.6e-40 168.3 135 69.6
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 3.6e-40 168.3 153 63.4
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 3.6e-40 168.3 130 66.9
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 6.1e-40 167.5 127 69.3
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 6.1e-40 167.5 135 66.7
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 8.0e-40 167.2 153 63.4
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 8.0e-40 167.2 134 65.7
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 1.0e-39 166.8 133 65.4
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.4e-39 166.4 167 61.1
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 1.4e-39 166.4 169 59.8
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 1.8e-39 166.0 149 63.8
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 2.3e-39 165.6 122 71.3
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 3.0e-39 165.2 131 67.9
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 3.0e-39 165.2 137 65.7
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 3.0e-39 165.2 132 69.7
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 4.0e-39 164.9 135 66.7
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 5.2e-39 164.5 133 65.4
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 6.8e-39 164.1 137 65.0
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 6.8e-39 164.1 135 66.7
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 8.8e-39 163.7 136 64.0
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 8.8e-39 163.7 166 57.8
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 8.8e-39 163.7 144 63.9
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 1.2e-38 163.3 79 97.5
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 1.2e-38 163.3 79 97.5
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 2.0e-38 162.5 139 66.2
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 2.6e-38 162.2 80 95.0
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 2.6e-38 162.2 141 67.4
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 3.4e-38 161.8 134 64.9
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 3.4e-38 161.8 134 64.9
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 3.4e-38 161.8 134 64.9
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 4.4e-38 161.4 80 95.0
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 4.4e-38 161.4 80 95.0
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 4.4e-38 161.4 130 66.2
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 7.5e-38 160.6 80 96.2
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 7.5e-38 160.6 137 63.5
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 7.5e-38 160.6 129 68.2
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 7.5e-38 160.6 79 94.9
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 9.8e-38 160.2 134 64.2
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 9.8e-38 160.2 152 61.2
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 9.8e-38 160.2 152 61.2
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 9.8e-38 160.2 152 61.2
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 9.8e-38 160.2 141 63.8
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 1.3e-37 159.8 135 64.4
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 1.3e-37 159.8 129 67.4
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 1.3e-37 159.8 130 66.2
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 1.7e-37 159.5 164 59.1
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 1.7e-37 159.5 79 94.9
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 1.7e-37 159.5 79 94.9
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 1.7e-37 159.5 79 94.9
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 1.7e-37 159.5 79 94.9
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 1.7e-37 159.5 79 94.9
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 1.7e-37 159.5 79 94.9
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 1.7e-37 159.5 79 94.9
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 1.7e-37 159.5 79 94.9
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 1.7e-37 159.5 79 94.9
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 1.7e-37 159.5 79 94.9
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 1.7e-37 159.5 79 94.9
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 2.2e-37 159.1 81 96.3
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 2.2e-37 159.1 130 64.6
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 3.7e-37 158.3 133 63.2
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 3.7e-37 158.3 134 65.7
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 4.9e-37 157.9 134 65.7
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 6.3e-37 157.5 133 65.4
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 6.3e-37 157.5 80 93.8
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 6.3e-37 157.5 80 93.8
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 1.1e-36 156.8 134 65.7
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 1.1e-36 156.8 129 65.9
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 1.4e-36 156.4 132 64.4
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 1.8e-36 156.0 136 62.5
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 1.8e-36 156.0 80 95.0
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 2.4e-36 155.6 141 61.0
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 4.1e-36 154.8 134 64.2
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 5.4e-36 154.5 80 90.0
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 9.2e-36 153.7 80 92.5
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 9.2e-36 153.7 80 92.5
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 1.6e-35 152.9 80 92.5
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 2.7e-35 152.1 80 88.8
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 5.9e-35 151.0 80 87.5
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 7.8e-35 150.6 163 54.6
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 1.7e-34 149.4 163 54.0
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 5.0e-34 147.9 80 85.0
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 1.1e-33 146.7 79 87.3
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 6.1e-32 141.0 81 82.7
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 4.9e-29 131.3 79 77.2
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 1.5e-25 119.8 72 81.9
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 2.5e-25 119.0 79 64.6
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 3.3e-25 118.6 79 72.2
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 2.1e-24 115.9 79 65.8
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 2.3e-23 112.5 79 63.3
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 3.1e-23 112.1 79 64.6
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 4.0e-23 111.7 136 51.5
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 9.5e-17 90.5 117 47.9
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 1.2e-14 83.6 93 47.3
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 2.0e-14 82.8 133 43.6
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 2.2e-13 79.3 72 55.6
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 9.5e-09 63.9 31 90.3
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 4.7e-08 61.6 29 93.1
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 4.7e-08 61.6 29 93.1
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 2.6e-06 55.8 74 36.5


User provided reference genes

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