Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 1.6e-135 486.1 247 100.0
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 4.0e-46 189.1 195 59.5
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 5.8e-45 185.3 193 61.7
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 3.8e-44 182.6 202 55.9
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 4.3e-40 169.1 200 54.5
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 1.5e-37 160.6 194 54.1
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 1.5e-37 160.6 204 53.4
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 3.8e-36 156.0 202 49.5
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 3.8e-36 156.0 208 48.1
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 4.9e-36 155.6 194 53.1
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 4.9e-36 155.6 200 51.5
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 1.1e-35 154.5 198 51.5
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 1.4e-35 154.1 210 51.0
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 1.4e-35 154.1 195 52.3
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 2.4e-35 153.3 209 47.8
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 3.2e-35 152.9 207 47.8
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 4.2e-35 152.5 186 51.1
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 4.2e-35 152.5 186 53.8
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 1.2e-34 151.0 190 51.6
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 3.5e-34 149.4 190 51.1
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 6.0e-34 148.7 203 46.8
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 7.9e-34 148.3 191 52.4
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 1.0e-33 147.9 209 47.8
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 5.1e-33 145.6 186 51.6
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.1e-32 144.4 207 49.8
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.1e-32 144.4 207 49.8
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 1.5e-32 144.1 193 50.3
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 2.5e-32 143.3 187 48.1
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 4.3e-32 142.5 184 47.8
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 9.6e-32 141.4 174 52.9
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.3e-31 141.0 215 47.4
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 1.6e-31 140.6 215 47.4
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.1e-31 140.2 215 47.0
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 2.8e-31 139.8 207 44.9
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 6.2e-31 138.7 182 47.3
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 6.2e-31 138.7 186 44.1
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 8.1e-31 138.3 223 45.7
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 1.4e-30 137.5 194 44.8
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 2.4e-30 136.7 190 43.7
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 6.9e-30 135.2 191 47.1
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 6.9e-30 135.2 192 47.9
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 9.0e-30 134.8 205 44.4
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 1.5e-29 134.0 203 46.3
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 2.0e-29 133.7 183 45.9
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.6e-29 133.3 202 47.0
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 2.6e-29 133.3 204 45.1
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 4.5e-29 132.5 175 44.6
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 5.8e-29 132.1 215 44.2
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 5.8e-29 132.1 193 46.1
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 5.8e-29 132.1 177 48.0
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 9.9e-29 131.3 208 48.1
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 9.9e-29 131.3 141 56.7
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 1.7e-28 130.6 178 47.8
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 3.8e-28 129.4 167 51.5
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 3.8e-28 129.4 173 47.4
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 6.4e-28 128.6 173 46.2
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 8.4e-28 128.3 220 44.5
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 1.1e-27 127.9 187 43.3
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 1.4e-27 127.5 183 47.5
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 1.4e-27 127.5 191 43.5
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 1.2e-26 124.4 183 44.3
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 2.1e-26 123.6 193 44.6
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 1.0e-25 121.3 215 43.3
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 1.3e-25 120.9 181 44.8
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 1.3e-25 120.9 171 46.8
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 1.8e-25 120.6 210 43.3
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 1.8e-25 120.6 195 40.5
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 1.8e-25 120.6 189 41.8
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 2.3e-25 120.2 174 44.8
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 3.9e-25 119.4 177 43.5
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 3.9e-25 119.4 167 46.7
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 5.1e-25 119.0 173 43.9
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 6.7e-25 118.6 154 47.4
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 1.5e-24 117.5 170 45.9
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 2.5e-24 116.7 169 47.3
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 5.6e-24 115.5 190 42.1
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 1.3e-23 114.4 155 47.7
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 2.8e-23 113.2 224 38.8
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 2.4e-22 110.2 234 37.6
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 4.0e-22 109.4 175 42.9
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 1.5e-21 107.5 228 36.8
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 4.5e-21 105.9 187 41.2
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 1.3e-20 104.4 167 38.9
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 6.5e-20 102.1 179 39.1
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 5.5e-19 99.0 172 40.1
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 4.6e-18 95.9 160 47.5
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 1.3e-17 94.4 85 61.2
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 1.5e-16 90.9 214 34.1
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 1.9e-16 90.5 184 35.3
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 1.8e-14 84.0 134 38.1
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 4.1e-14 82.8 87 51.7
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 3.4e-13 79.7 137 46.0
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 5.9e-13 79.0 138 37.0
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 3.8e-12 76.3 165 33.3
Os01g0532300 Oryza sativa ssp. japonica HOM05D007542 ORTHO05D009519 6.3e-07 58.9 242 25.6
ATR0772G056 Amborella trichopoda HOM05D007542 ORTHO05D009519 2.4e-06 57.0 66 45.5
ATR0317G118 Amborella trichopoda HOM05D007542 ORTHO05D009519 5.3e-06 55.8 66 43.9


User provided reference genes

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