Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40761 Davidia involucrata HOM05D006936 ORTHO05D008273 7.1e-72 273.9 142 100.0
Hma1.2p1_0738F.1_g211120 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 8.5e-49 197.2 133 80.5
Hma1.2p1_2518F.1_g323766 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 8.5e-49 197.2 133 80.5
Nn1g03514 Nelumbo nucifera HOM05D006936 ORTHO05D008273 2.3e-46 189.1 134 76.1
CSS0049611 Camellia sinensis var. sinensis HOM05D006936 ORTHO05D008273 3.3e-45 185.3 136 75.7
TAR624G1327 Trochodendron aralioides HOM05D006936 ORTHO05D008273 3.7e-44 181.8 136 71.3
CiPaw.11G190300 Carya illinoinensis HOM05D006936 ORTHO05D008273 1.2e-42 176.8 136 72.1
Gohir.A01G080100 Gossypium hirsutum HOM05D006936 ORTHO05D008273 2.0e-42 176.0 135 71.1
Gohir.D01G067300 Gossypium hirsutum HOM05D006936 ORTHO05D008273 2.0e-42 176.0 135 71.1
GSVIVG01037658001 Vitis vinifera HOM05D006936 ORTHO05D008273 2.0e-42 176.0 135 71.1
Gorai.002G089200 Gossypium raimondii HOM05D006936 ORTHO05D008273 3.4e-42 175.3 135 71.1
Hma1.2p1_0738F.1_g211130 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 1.0e-41 173.7 132 73.5
Thecc.07G035400 Theobroma cacao HOM05D006936 ORTHO05D008273 1.0e-41 173.7 135 70.4
Ciclev10009642m.g Citrus clementina HOM05D006936 ORTHO05D008273 2.2e-41 172.6 133 72.2
Glyma.18G095900 Glycine max HOM05D006936 ORTHO05D008273 2.2e-41 172.6 135 69.6
Prupe.4G214700 Prunus persica HOM05D006936 ORTHO05D008273 2.2e-41 172.6 135 67.4
QL08p009960 Quercus lobata HOM05D006936 ORTHO05D008273 2.9e-41 172.2 181 55.8
Duzib213G0701 Durio zibethinus HOM05D006936 ORTHO05D008273 3.8e-41 171.8 135 69.6
Haze_09683 Corylus avellana HOM05D006936 ORTHO05D008273 1.4e-40 169.9 135 68.9
DCAR_022566 Daucus carota HOM05D006936 ORTHO05D008273 1.9e-40 169.5 133 68.4
ClCG10G005400 Citrullus lanatus HOM05D006936 ORTHO05D008273 4.2e-40 168.3 135 68.1
Eucgr.F03471 Eucalyptus grandis HOM05D006936 ORTHO05D008273 7.2e-40 167.5 133 69.2
Glyma.08G317000 Glycine max HOM05D006936 ORTHO05D008273 7.2e-40 167.5 135 69.6
HanXRQChr03g0076461 Helianthus annuus HOM05D006936 ORTHO05D008273 7.2e-40 167.5 135 68.1
Lj6g0001928 Lotus japonicus HOM05D006936 ORTHO05D008273 9.4e-40 167.2 135 68.1
Phvul.006G044500 Phaseolus vulgaris HOM05D006936 ORTHO05D008273 1.6e-39 166.4 135 67.4
Potri.003G122100 Populus trichocarpa HOM05D006936 ORTHO05D008273 1.6e-39 166.4 136 68.4
Cpa.g.sc12.300 Carica papaya HOM05D006936 ORTHO05D008273 2.1e-39 166.0 135 65.9
Aqoxy3G01790 Aquilegia oxysepala HOM05D006936 ORTHO05D008273 3.6e-39 165.2 139 68.3
Migut.H01824 Erythranthe guttata HOM05D006936 ORTHO05D008273 6.1e-39 164.5 133 67.7
AL7G25870 Arabidopsis lyrata HOM05D006936 ORTHO05D008273 7.9e-39 164.1 135 65.2
BcaNung03571 Brassica carinata HOM05D006936 ORTHO05D008273 1.0e-38 163.7 135 63.7
CsaV3_3G005130 Cucumis sativus L. HOM05D006936 ORTHO05D008273 1.0e-38 163.7 135 67.4
Carub.0007s1390 Capsella rubella HOM05D006936 ORTHO05D008273 2.3e-38 162.5 135 63.0
RcHm_v2.0_Chr5g0040171 Rosa chinensis HOM05D006936 ORTHO05D008273 2.3e-38 162.5 133 65.4
TPR.G33779 Trifolium pratense HOM05D006936 ORTHO05D008273 2.3e-38 162.5 136 65.4
VMungo0540G1312 Vigna mungo HOM05D006936 ORTHO05D008273 2.3e-38 162.5 135 65.2
FvH4_3g22870 Fragaria vesca HOM05D006936 ORTHO05D008273 3.0e-38 162.2 133 66.2
FAN11G3489 Fragaria x ananassa HOM05D006936 ORTHO05D008273 3.0e-38 162.2 133 66.2
AT4G26965 Arabidopsis thaliana HOM05D006936 ORTHO05D008273 3.9e-38 161.8 135 65.2
MD11G1216700 Malus domestica HOM05D006936 ORTHO05D008273 3.9e-38 161.8 135 65.2
Cc05_g13850 Coffea canephora HOM05D006936 ORTHO05D008273 6.7e-38 161.0 135 67.4
ECA240G2843 Erigeron canadensis HOM05D006936 ORTHO05D008273 6.7e-38 161.0 135 66.7
FAN21G0204 Fragaria x ananassa HOM05D006936 ORTHO05D008273 6.7e-38 161.0 133 65.4
MSTRG.12976 Avicennia marina HOM05D006936 ORTHO05D008273 8.8e-38 160.6 139 66.2
Hma1.2p1_0738F.1_g211140 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 8.8e-38 160.6 123 74.0
Hma1.2p1_2518F.1_g323762 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 8.8e-38 160.6 123 74.0
Lalb_Chr20g0113821 Lupinus albus HOM05D006936 ORTHO05D008273 1.1e-37 160.2 139 64.0
Ca_19852_v3 Cicer arietinum L. HOM05D006936 ORTHO05D008273 1.5e-37 159.8 136 64.7
Potri.001G109600 Populus trichocarpa HOM05D006936 ORTHO05D008273 1.5e-37 159.8 136 66.9
Manes.03G129900 Manihot esculenta HOM05D006936 ORTHO05D008273 2.0e-37 159.5 135 65.9
Rhsim06G0217500 Rhododendron simsii HOM05D000228 ORTHO05D001122 3.3e-37 158.7 114 73.7
BcaB03g12517 Brassica carinata HOM05D006936 ORTHO05D008273 4.4e-37 158.3 133 64.7
BcaC07g38260 Brassica carinata HOM05D006936 ORTHO05D008273 4.4e-37 158.3 133 63.9
C08p10070 Brassica napus HOM05D006936 ORTHO05D008273 4.4e-37 158.3 133 63.9
BolC8t48685H Brassica oleracea HOM05D006936 ORTHO05D008273 4.4e-37 158.3 133 63.9
A01p18140 Brassica napus HOM05D006936 ORTHO05D008273 2.2e-36 156.0 135 60.7
BraA01t01769Z Brassica rapa HOM05D006936 ORTHO05D008273 2.2e-36 156.0 135 60.7
Medtr3g052260 Medicago truncatula HOM05D006936 ORTHO05D008273 2.2e-36 156.0 136 61.0
Sp7g24910 Schrenkiella parvula HOM05D006936 ORTHO05D008273 2.2e-36 156.0 135 61.5
BolC1t02244H Brassica oleracea HOM05D006936 ORTHO05D008273 2.8e-36 155.6 135 60.7
C01p23100 Brassica napus HOM05D006936 ORTHO05D008273 6.3e-36 154.5 135 61.5
Lsat_1_v5_gn_9_93840 Lactuca sativa HOM05D006936 ORTHO05D008273 8.2e-36 154.1 135 63.7
SGA_v2.0_scaffold8G04322 Striga asiatica HOM05D006936 ORTHO05D008273 1.8e-35 152.9 132 65.2
CANSAT11G0469 Cannabis sativa HOM05D006936 ORTHO05D008273 5.3e-35 151.4 136 62.5
PSO832G3825 Papaver somniferum HOM05D006936 ORTHO05D008273 5.3e-35 151.4 136 60.3
Psat5g178440 Pisum sativum HOM05D006936 ORTHO05D008273 1.6e-34 149.8 134 61.9
PGSC0003DMG401022215 Solanum tuberosum HOM05D006936 ORTHO05D008273 2.6e-34 149.1 135 61.5
TWI38G2356 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 3.5e-34 148.7 135 65.2
Solyc07g064640.3 Solanum lycopersicum HOM05D006936 ORTHO05D008273 5.9e-34 147.9 135 60.7
Sopen07g032840 Solanum pennellii HOM05D006936 ORTHO05D008273 5.9e-34 147.9 135 60.7
Peaxi162Scf00235g00220 Petunia axillaris HOM05D006936 ORTHO05D008273 1.0e-33 147.1 138 62.3
CARHR234570 Cardamine hirsuta HOM05D006936 ORTHO05D008273 1.3e-33 146.7 134 56.7
PSO210G5704 Papaver somniferum HOM05D006936 ORTHO05D008273 1.3e-33 146.7 135 58.5
TWI39G1260 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 1.7e-33 146.4 133 65.4
THA.LOC104813424 Tarenaya hassleriana HOM05D006936 ORTHO05D008273 6.5e-33 144.4 135 61.5
EL10Ac4g07798 Beta vulgaris HOM05D006936 ORTHO05D008273 7.2e-32 141.0 135 55.6
arahy.Tifrunner.gnm1.ann1.MX8M57 Arachis hypogaea HOM05D006936 ORTHO05D008273 9.4e-32 140.6 101 72.3
arahy.Tifrunner.gnm1.ann1.HAV09U Arachis hypogaea HOM05D006936 ORTHO05D008273 6.1e-31 137.9 98 73.5
BraA08t34018Z Brassica rapa HOM05D006936 ORTHO05D008273 2.3e-30 136.0 169 50.3
Aa31LG5G12010 Aethionema arabicum HOM05D006936 ORTHO05D008273 3.0e-30 135.6 135 58.5
Sc16g0005990 Simmondsia chinensis HOM05D006936 ORTHO05D008273 3.0e-30 135.6 133 57.1
unitig_8.g4785 Utricularia gibba HOM05D006936 ORTHO05D008273 1.2e-29 133.7 137 54.0
PGR031G2182 Punica granatum HOM05D006936 ORTHO05D008273 2.0e-29 132.9 135 59.3
Sabra01G0082900 Salix brachista HOM05D006936 ORTHO05D008273 5.7e-29 131.3 91 73.6
HPP92_004131 Vanilla planifolia HOM05D006936 ORTHO05D008273 2.8e-28 129.0 139 56.8
MBI02_g21871_MAGBIO Magnolia biondii HOM05D006936 ORTHO05D008273 4.8e-28 128.3 126 59.5
FAN16G3045 Fragaria x ananassa HOM05D006936 ORTHO05D008273 8.2e-28 127.5 155 51.0
Cfa020336 Carpinus fangiana HOM05D000228 ORTHO05D001122 4.1e-27 125.2 93 68.8
Thhalv10026517m.g Eutrema salsugineum HOM05D006936 ORTHO05D008273 1.6e-26 123.2 80 76.2
A08p20640 Brassica napus HOM05D006936 ORTHO05D008273 3.5e-26 122.1 113 61.9
Nitab4.5_0007360g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 1.3e-25 120.2 80 76.2
CDE05G0574 Ceratophyllum demersum HOM05D006936 ORTHO05D008273 1.7e-25 119.8 79 78.5
Nitab4.5_0003495g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 1.7e-25 119.8 80 77.5
Os09g0500200 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 2.2e-25 119.4 135 54.8
Oeu048401.1 Olea europaea HOM05D006936 ORTHO05D008273 1.9e-24 116.3 77 77.9
Sed0005355 Sechium edule HOM05D006936 ORTHO05D008273 1.2e-23 113.6 79 72.2
MELO3C025377.2 Cucumis melo HOM05D006936 ORTHO05D008273 2.1e-23 112.8 135 50.4
arahy.Tifrunner.gnm1.ann1.XX62UZ Arachis hypogaea HOM05D006936 ORTHO05D008273 2.7e-23 112.5 116 59.5
CAN.G337.138 Capsicum annuum HOM05D006936 ORTHO05D008273 1.4e-22 110.2 135 54.1
ATR1094G005 Amborella trichopoda HOM05D006936 ORTHO05D008273 4.4e-21 105.1 104 59.6
Zm00001eb102230 Zea mays HOM05D006936 ORTHO05D008273 4.4e-21 105.1 133 47.4
Actinidia24797 Actinidia chinensis HOM05D006936 ORTHO05D008273 1.7e-20 103.2 70 75.7
vmacro02234 Vaccinium macrocarpon HOM05D006936 ORTHO05D008273 5.4e-19 98.2 78 70.5
Ah.06g185850 Amaranthus hybridus HOM05D006936 ORTHO05D008273 1.5e-16 90.1 114 50.9
Os05g0538900 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 1.3e-12 77.0 48 81.2
Atru.chr2.3444 Acer truncatum HOM05D006936 ORTHO05D008273 4.9e-12 75.1 47 76.6
DCAR_000990 Daucus carota HOM05D006936 ORTHO05D008273 1.2e-10 70.5 66 65.2
Sabra18G0079500 Salix brachista HOM05D006936 ORTHO05D008273 4.5e-10 68.6 37 83.8
vmacro02233 Vaccinium macrocarpon HOM05D006936 ORTHO05D008273 4.5e-10 68.6 37 83.8
Mapoly0093s0007 Marchantia polymorpha HOM05D006936 ORTHO05D008273 5.9e-10 68.2 155 31.6
SEGI_32271 Sequoiadendron giganteum HOM05D006301 ORTHO05D008273 1.0e-09 67.4 54 61.1
AUR62015785 Chenopodium quinoa HOM05D000355 ORTHO05D000227 1.5e-08 63.5 118 42.4
Hund23239 Selenicereus undatus HOM05D006936 ORTHO05D008273 1.5e-08 63.5 138 37.0
AUR62020430 Chenopodium quinoa HOM05D006936 ORTHO05D008273 3.3e-08 62.4 115 40.0
Pp3c15_25830 Physcomitrium patens HOM05D006936 ORTHO05D008273 3.3e-08 62.4 118 35.6


User provided reference genes

Program Settings