Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 6.6e-85 317.4 166 100.0
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 2.9e-56 222.2 166 72.9
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 1.1e-55 220.3 166 71.7
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 4.2e-55 218.4 164 71.3
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 4.2e-55 218.4 164 71.3
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 9.3e-55 217.2 163 67.5
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 1.6e-54 216.5 165 70.3
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 5.1e-53 211.5 163 65.6
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 1.9e-52 209.5 164 68.9
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 1.9e-52 209.5 163 68.7
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 4.3e-52 208.4 168 67.9
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 1.3e-51 206.8 165 67.9
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 2.8e-51 205.7 165 66.7
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 3.1e-50 202.2 167 68.3
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 4.0e-50 201.8 164 67.1
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 1.5e-49 199.9 163 66.9
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 2.0e-49 199.5 163 66.3
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 2.0e-49 199.5 167 67.1
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 3.4e-49 198.7 164 64.0
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 4.4e-49 198.4 164 66.5
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 9.9e-49 197.2 165 64.8
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 1.7e-48 196.4 165 65.5
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 2.2e-48 196.1 167 63.5
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 2.2e-48 196.1 164 63.4
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 2.9e-48 195.7 164 62.8
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 3.8e-48 195.3 165 62.4
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 1.1e-47 193.7 166 64.5
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 1.9e-47 193.0 172 61.6
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 5.4e-47 191.4 164 64.6
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 9.3e-47 190.7 163 59.5
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 1.2e-46 190.3 164 61.6
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 1.6e-46 189.9 164 61.6
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 1.7e-45 186.4 165 64.2
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 5.1e-45 184.9 163 60.1
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 8.7e-45 184.1 163 60.7
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.1e-44 183.7 155 61.3
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 1.5e-44 183.3 174 59.8
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 1.9e-44 183.0 166 62.0
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 2.5e-44 182.6 167 59.9
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 5.6e-44 181.4 167 59.3
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 5.6e-44 181.4 163 60.1
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 1.6e-43 179.9 164 61.0
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 2.1e-43 179.5 164 62.2
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 2.8e-43 179.1 165 59.4
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 6.2e-43 177.9 166 60.8
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 8.1e-43 177.6 164 60.4
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 1.1e-42 177.2 167 59.3
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.4e-42 176.8 166 60.8
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 1.8e-42 176.4 166 60.2
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.8e-42 176.4 166 60.2
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 3.1e-42 175.6 166 56.6
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.5e-41 173.3 166 59.6
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 4.5e-41 171.8 165 57.6
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 1.7e-40 169.9 168 56.5
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 2.9e-40 169.1 163 59.5
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 2.9e-40 169.1 168 57.1
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 2.9e-40 169.1 164 58.5
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 3.8e-40 168.7 168 57.1
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 3.8e-40 168.7 167 58.1
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 3.8e-40 168.7 163 57.7
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 8.4e-40 167.5 164 58.5
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 1.1e-39 167.2 173 57.8
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 1.1e-39 167.2 164 57.9
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 1.4e-39 166.8 168 55.4
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 2.4e-39 166.0 165 58.2
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 4.2e-39 165.2 173 56.6
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 7.1e-39 164.5 168 55.4
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 1.2e-38 163.7 173 57.2
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 7.9e-38 161.0 162 54.9
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.3e-37 160.2 166 56.0
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 5.1e-37 158.3 177 55.4
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 5.1e-37 158.3 166 55.4
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.5e-36 156.8 166 55.4
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 4.3e-36 155.2 167 58.1
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 1.3e-35 153.7 165 56.4
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 1.3e-35 153.7 148 60.1
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 1.6e-35 153.3 165 53.3
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 2.1e-35 152.9 174 53.4
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 6.2e-35 151.4 174 54.6
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 1.1e-34 150.6 170 52.9
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 1.4e-34 150.2 163 54.6
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 4.0e-34 148.7 164 54.3
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 9.0e-34 147.5 141 61.0
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 1.2e-33 147.1 173 52.0
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 2.6e-33 146.0 169 48.5
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 4.5e-33 145.2 174 52.9
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 1.0e-32 144.1 161 50.3
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 1.3e-32 143.7 166 54.2
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 2.9e-32 142.5 164 54.3
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 3.8e-32 142.1 179 51.4
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 1.1e-31 140.6 169 47.9
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 1.4e-31 140.2 171 50.9
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 1.9e-31 139.8 170 50.6
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 2.5e-31 139.4 166 57.2
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 9.3e-31 137.5 205 46.8
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 2.1e-30 136.3 213 45.1
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 4.6e-30 135.2 213 44.6
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 7.9e-30 134.4 166 50.0
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 1.0e-29 134.0 161 53.4
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 8.7e-29 131.0 165 49.7
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 2.5e-28 129.4 189 43.9
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 9.6e-28 127.5 178 48.3
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 1.3e-27 127.1 190 45.3
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 1.3e-27 127.1 190 45.3
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 2.1e-27 126.3 162 50.0
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 4.8e-27 125.2 190 44.7
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 6.2e-27 124.8 190 44.7
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 6.2e-27 124.8 190 44.7
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 6.2e-27 124.8 165 49.1
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 1.8e-26 123.2 219 42.5
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 1.8e-26 123.2 167 46.7
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 4.0e-26 122.1 137 55.5
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 1.0e-24 117.5 188 42.6
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 3.8e-24 115.5 187 41.7
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 6.5e-24 114.8 191 44.0
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 1.1e-23 114.0 174 40.8
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 9.3e-23 110.9 160 48.1
HanXRQChr05g0159131 Helianthus annuus HOM05D005769 ORTHO05D006851 2.3e-21 106.3 164 46.3
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 1.9e-20 103.2 164 41.5
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 7.4e-20 101.3 165 45.5
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 6.3e-19 98.2 170 41.2
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 2.4e-18 96.3 193 38.9
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.2e-17 94.0 162 40.1
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.5e-17 93.6 161 39.8
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 1.0e-16 90.9 167 41.9
Lalb_Chr10g0106921 Lupinus albus HOM05D005769 ORTHO05D006851 1.7e-16 90.1 126 46.8
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 1.7e-16 90.1 170 40.6
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 7.2e-15 84.7 158 37.3
Lsat_1_v5_gn_5_125321 Lactuca sativa HOM05D005769 ORTHO05D006851 1.2e-14 84.0 168 38.7
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 2.7e-14 82.8 154 39.0
Oeu021395.2 Olea europaea HOM05D005769 ORTHO05D006851 4.3e-12 75.5 163 35.0
HPP92_012322 Vanilla planifolia HOM05D005769 ORTHO05D006851 6.9e-10 68.2 163 36.8
DCAR_021174 Daucus carota HOM05D005769 ORTHO05D006851 9.1e-10 67.8 157 32.5
HPP92_012395 Vanilla planifolia HOM05D005769 ORTHO05D006851 1.2e-09 67.4 163 35.6
HanXRQChr10g0305811 Helianthus annuus HOM05D005769 ORTHO05D006851 2.5e-07 59.7 138 34.8
SEGI_38354 Sequoiadendron giganteum HOM05D005769 ORTHO05D006851 7.9e-06 54.7 228 26.8


User provided reference genes

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