Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40692 Davidia involucrata HOM05D000761 ORTHO05D001062 2.9e-103 379.0 261 100.0
Dinv16787 Davidia involucrata HOM05D000761 ORTHO05D001062 3.2e-70 269.2 243 85.2
CSS0018121 Camellia sinensis var. sinensis HOM05D000761 ORTHO05D001062 6.7e-60 235.0 244 77.5
CSS0010140 Camellia sinensis var. sinensis HOM05D000761 ORTHO05D001062 9.1e-57 224.6 249 75.9
CSS0020856 Camellia sinensis var. sinensis HOM05D000761 ORTHO05D001062 1.2e-53 214.2 253 69.6
CSS0024893 Camellia sinensis var. sinensis HOM05D000761 ORTHO05D001062 1.2e-53 214.2 253 69.6
Actinidia07646 Actinidia chinensis HOM05D000761 ORTHO05D001062 6.1e-53 211.8 254 70.9
TAR627G0125 Trochodendron aralioides HOM05D000761 ORTHO05D001062 8.8e-52 208.0 250 70.0
Lj1C1191T14 Lonicera japonica HOM05D000761 ORTHO05D001062 7.0e-49 198.4 239 69.5
vmacro03925 Vaccinium macrocarpon HOM05D000761 ORTHO05D001062 1.0e-47 194.5 260 70.0
Actinidia16790 Actinidia chinensis HOM05D000761 ORTHO05D001062 2.2e-47 193.4 242 70.7
Rhsim02G0143600 Rhododendron simsii HOM05D000761 ORTHO05D001062 2.9e-47 193.0 255 69.8
Rhsim13G0189500 Rhododendron simsii HOM05D000761 ORTHO05D001062 2.9e-47 193.0 238 69.7
TWI38G1255 Tripterygium wilfordii HOM05D000761 ORTHO05D001062 2.3e-44 183.3 254 65.0
TWI63G0610 Tripterygium wilfordii HOM05D000761 ORTHO05D001062 3.0e-44 183.0 254 66.1
QL05p047732 Quercus lobata HOM05D000761 ORTHO05D001062 1.5e-43 180.6 239 69.9
Actinidia35582 Actinidia chinensis HOM05D000761 ORTHO05D001062 7.5e-43 178.3 253 67.6
Nn1g09162 Nelumbo nucifera HOM05D000761 ORTHO05D001062 7.5e-43 178.3 249 67.1
TWI38G1474 Tripterygium wilfordii HOM05D000761 ORTHO05D001062 1.7e-42 177.2 252 64.3
PSO541G1914 Papaver somniferum HOM05D000761 ORTHO05D001062 4.9e-42 175.6 252 65.5
Potri.011G067400 Populus trichocarpa HOM05D000761 ORTHO05D001062 2.4e-41 173.3 252 66.3
Manes.17G056800 Manihot esculenta HOM05D000761 ORTHO05D001062 5.4e-41 172.2 256 58.2
PSO675G8486 Papaver somniferum HOM05D000761 ORTHO05D001062 9.2e-41 171.4 252 65.1
Duzib235G0869 Durio zibethinus HOM05D000761 ORTHO05D001062 5.9e-40 168.7 247 61.9
Gohir.D09G074200 Gossypium hirsutum HOM05D000761 ORTHO05D001062 2.3e-39 166.8 246 67.1
Gorai.006G089100 Gossypium raimondii HOM05D000761 ORTHO05D001062 2.3e-39 166.8 246 67.1
GSVIVG01021228001 Vitis vinifera HOM05D000761 ORTHO05D001062 2.9e-39 166.4 209 76.1
Gohir.A09G074400 Gossypium hirsutum HOM05D000761 ORTHO05D001062 6.6e-39 165.2 246 66.3
Oeu001079.2 Olea europaea HOM05D000761 ORTHO05D001062 9.5e-38 161.4 236 68.6
Nitab4.5_0000165g0150 Nicotiana tabacum HOM05D000761 ORTHO05D001062 3.6e-37 159.5 256 57.4
Duzib192G0581 Durio zibethinus HOM05D000761 ORTHO05D001062 4.7e-37 159.1 244 66.8
Potri.004G058100 Populus trichocarpa HOM05D000761 ORTHO05D001062 6.1e-37 158.7 251 62.5
CiPaw.10G060000 Carya illinoinensis HOM05D000761 ORTHO05D001062 8.0e-37 158.3 254 66.1
Nitab4.5_0003475g0010 Nicotiana tabacum HOM05D000761 ORTHO05D001062 8.0e-37 158.3 256 57.8
PSO782G5213 Papaver somniferum HOM05D000761 ORTHO05D001062 5.2e-36 155.6 237 64.1
Lalb_Chr12g0205071 Lupinus albus HOM05D000761 ORTHO05D001062 2.0e-35 153.7 249 63.5
PSO063G0784 Papaver somniferum HOM05D000761 ORTHO05D001062 3.4e-35 152.9 237 65.4
CiPaw.09G070700 Carya illinoinensis HOM05D000761 ORTHO05D001062 4.4e-35 152.5 251 64.1
MBI06_g45398_MAGBIO Magnolia biondii HOM05D000761 ORTHO05D001062 5.7e-35 152.1 261 61.3
Lsat_1_v5_gn_1_16180 Lactuca sativa HOM05D000761 ORTHO05D001062 1.3e-34 151.0 239 63.6
Ciclev10014435m.g Citrus clementina HOM05D000761 ORTHO05D001062 1.7e-34 150.6 245 64.1
MBI06_g08609_MAGBIO Magnolia biondii HOM05D000761 ORTHO05D001062 2.9e-34 149.8 261 60.9
TAR626G1611 Trochodendron aralioides HOM05D000761 ORTHO05D001062 2.9e-34 149.8 123 65.9
Haze_06214 Corylus avellana HOM05D000761 ORTHO05D001062 3.7e-34 149.4 250 54.0
Sopen02g006150 Solanum pennellii HOM05D000761 ORTHO05D001062 3.7e-34 149.4 253 61.7
Lj6g0003778 Lotus japonicus HOM05D000761 ORTHO05D001062 6.4e-34 148.7 254 56.7
Lj2C302T3 Lonicera japonica HOM05D000761 ORTHO05D001062 8.3e-34 148.3 290 54.8
Lalb_Chr07g0186421 Lupinus albus HOM05D000761 ORTHO05D001062 1.4e-33 147.5 246 53.7
Eucgr.E02755 Eucalyptus grandis HOM05D000761 ORTHO05D001062 4.1e-33 146.0 238 59.2
Solyc02g021590.3 Solanum lycopersicum HOM05D000761 ORTHO05D001062 7.0e-33 145.2 251 61.4
TAR629G1411 Trochodendron aralioides HOM05D000761 ORTHO05D001062 1.6e-32 144.1 239 63.6
Lalb_Chr18g0054591 Lupinus albus HOM05D000761 ORTHO05D001062 4.6e-32 142.5 256 56.6
Ca_17917_v3 Cicer arietinum L. HOM05D000761 ORTHO05D001062 1.7e-31 140.6 251 57.4
Peaxi162Scf00768g00114 Petunia axillaris HOM05D000761 ORTHO05D001062 2.3e-31 140.2 258 60.5
Sabra04G0037700 Salix brachista HOM05D000761 ORTHO05D001062 2.3e-31 140.2 246 39.0
Lalb_Chr13g0295161 Lupinus albus HOM05D000761 ORTHO05D001062 3.0e-31 139.8 260 55.0
PGSC0003DMG400010230 Solanum tuberosum HOM05D000761 ORTHO05D001062 8.6e-31 138.3 233 63.5
Psat7g070960 Pisum sativum HOM05D000761 ORTHO05D001062 1.5e-30 137.5 263 49.4
ECA248G3677 Erigeron canadensis HOM05D000761 ORTHO05D001062 2.5e-30 136.7 239 61.9
Prupe.4G062600 Prunus persica HOM05D000761 ORTHO05D001062 3.3e-30 136.3 236 62.3
CAN.G370.93 Capsicum annuum HOM05D000761 ORTHO05D001062 5.6e-30 135.6 238 60.9
HanXRQChr03g0071801 Helianthus annuus HOM05D000761 ORTHO05D001062 5.6e-30 135.6 233 60.5
MBI07_g09560_MAGBIO Magnolia biondii HOM05D000761 ORTHO05D001062 9.5e-30 134.8 239 62.3
HanXRQChr09g0252141 Helianthus annuus HOM05D000761 ORTHO05D001062 2.8e-29 133.3 237 60.3
Medtr2g016320 Medicago truncatula HOM05D000761 ORTHO05D001062 2.8e-29 133.3 252 43.3
Medtr2g016360 Medicago truncatula HOM05D000761 ORTHO05D001062 2.8e-29 133.3 252 43.3
Cfa000621 Carpinus fangiana HOM05D000761 ORTHO05D001062 3.6e-29 132.9 226 64.2
Cc02_g15130 Coffea canephora HOM05D000761 ORTHO05D001062 6.2e-29 132.1 225 61.8
Lj4g0016552 Lotus japonicus HOM05D000761 ORTHO05D001062 8.0e-29 131.7 246 57.3
Solyc02g076660.3 Solanum lycopersicum HOM05D000761 ORTHO05D001062 1.0e-28 131.3 233 61.4
TPR.G24359 Trifolium pratense HOM05D000761 ORTHO05D001062 1.0e-28 131.3 248 58.5
vmacro16058 Vaccinium macrocarpon HOM05D000761 ORTHO05D001062 1.8e-28 130.6 125 60.0
Psat1g197040 Pisum sativum HOM05D000761 ORTHO05D001062 2.3e-28 130.2 252 56.0
Sopen03g002140 Solanum pennellii HOM05D000761 ORTHO05D001062 2.3e-28 130.2 253 61.3
Medtr8g086390 Medicago truncatula HOM05D000761 ORTHO05D001062 3.1e-28 129.8 249 61.0
Sopen02g021590 Solanum pennellii HOM05D000761 ORTHO05D001062 5.2e-28 129.0 233 61.4
Solyc03g006130.3 Solanum lycopersicum HOM05D000761 ORTHO05D001062 1.5e-27 127.5 253 60.9
PGSC0003DMG400004384 Solanum tuberosum HOM05D000761 ORTHO05D001062 2.6e-27 126.7 233 61.8
MD10G1278700 Malus domestica HOM05D000761 ORTHO05D001062 2.9e-26 123.2 238 61.3
Atru.chr10.1650 Acer truncatum HOM05D000761 ORTHO05D001062 4.9e-26 122.5 250 56.4
CAN.G1286.6 Capsicum annuum HOM05D000761 ORTHO05D001062 6.4e-26 122.1 232 61.2
Ca_00444_v3 Cicer arietinum L. HOM05D000761 ORTHO05D001062 6.4e-26 122.1 249 54.2
Aqoxy4G00315 Aquilegia oxysepala HOM05D000761 ORTHO05D001062 8.3e-26 121.7 254 53.9
MD05G1299200 Malus domestica HOM05D000761 ORTHO05D001062 1.1e-25 121.3 241 57.7
Duzib160G0402 Durio zibethinus HOM05D000761 ORTHO05D001062 1.2e-24 117.9 243 59.7
CANSAT11G2392 Cannabis sativa HOM05D000761 ORTHO05D001062 2.7e-24 116.7 258 55.0
Gorai.010G241800 Gossypium raimondii HOM05D000761 ORTHO05D001062 4.6e-24 115.9 233 56.7
Thecc.06G169100 Theobroma cacao HOM05D000761 ORTHO05D001062 6.0e-24 115.5 243 55.6
DCAR_007942 Daucus carota HOM05D000761 ORTHO05D001062 3.0e-23 113.2 155 46.5
Gohir.D06G207400 Gossypium hirsutum HOM05D000761 ORTHO05D001062 3.0e-23 113.2 235 59.1
Manes.16G041000 Manihot esculenta HOM05D000761 ORTHO05D001062 3.0e-23 113.2 250 47.6
Oeu042426.1 Olea europaea HOM05D000761 ORTHO05D001062 3.9e-23 112.8 227 61.7
Sabra11G0050500 Salix brachista HOM05D000761 ORTHO05D001062 5.0e-23 112.5 132 51.5
DCAR_027993 Daucus carota HOM05D000761 ORTHO05D001062 8.6e-23 111.7 255 49.8
THA.LOC104806157 Tarenaya hassleriana HOM05D000761 ORTHO05D001062 2.5e-22 110.2 254 55.1
FvH4_3g07660 Fragaria vesca HOM05D000761 ORTHO05D001062 1.2e-21 107.8 241 54.8
SalBow8G0215 Salvia bowleyana HOM05D000761 ORTHO05D001062 2.8e-21 106.7 254 55.9
Cpa.g.sc7.80 Carica papaya HOM05D000761 ORTHO05D001062 3.6e-21 106.3 160 73.8
Peaxi162Scf00854g00049 Petunia axillaris HOM05D000761 ORTHO05D001062 6.2e-21 105.5 232 59.9
ClCG03G007630 Citrullus lanatus HOM05D000761 ORTHO05D001062 8.1e-21 105.1 239 58.2
Glyma.05G158800 Glycine max HOM05D000761 ORTHO05D001062 8.1e-21 105.1 158 44.3
SalBow7G3557 Salvia bowleyana HOM05D000761 ORTHO05D001062 8.1e-21 105.1 148 42.6
Gohir.A06G200100 Gossypium hirsutum HOM05D000761 ORTHO05D001062 1.4e-20 104.4 249 57.0
FAN25G2387 Fragaria x ananassa HOM05D000761 ORTHO05D001062 1.8e-20 104.0 152 43.4
MELO3C002659.2 Cucumis melo HOM05D000761 ORTHO05D001062 4.0e-20 102.8 247 54.7
MSTRG.13225 Avicennia marina HOM05D000761 ORTHO05D001062 5.2e-20 102.4 153 43.1
Nitab4.5_0000605g0070 Nicotiana tabacum HOM05D000761 ORTHO05D001062 6.8e-20 102.1 233 56.7
RcHm_v2.0_Chr5g0011021 Rosa chinensis HOM05D000761 ORTHO05D001062 6.8e-20 102.1 239 54.4
CsaV3_1G033280 Cucumis sativus L. HOM05D000761 ORTHO05D001062 1.5e-19 100.9 247 51.8
FAN11G1230 Fragaria x ananassa HOM05D000761 ORTHO05D001062 2.6e-19 100.1 138 44.2
Nitab4.5_0008430g0020 Nicotiana tabacum HOM05D000761 ORTHO05D001062 2.6e-19 100.1 233 55.4
FAN21G3115 Fragaria x ananassa HOM05D000761 ORTHO05D001062 3.4e-19 99.8 145 42.8
Sed0022252 Sechium edule HOM05D000761 ORTHO05D001062 3.4e-19 99.8 251 53.8
THA.LOC104812876 Tarenaya hassleriana HOM05D000761 ORTHO05D001062 9.8e-19 98.2 237 51.9
Oeu043112.1 Olea europaea HOM05D000761 ORTHO05D001062 4.9e-18 95.9 115 47.8
arahy.Tifrunner.gnm1.ann1.KZTX3E Arachis hypogaea HOM05D000761 ORTHO05D001062 8.3e-18 95.1 246 46.3
VMungo0540G2382 Vigna mungo HOM05D000761 ORTHO05D001062 4.1e-17 92.8 253 43.5
COL.COLO4_31277 Corchorus olitorius HOM05D000761 ORTHO05D001062 5.4e-17 92.4 236 53.4
Lalb_Chr15g0086131 Lupinus albus HOM05D000761 ORTHO05D001062 7.1e-17 92.0 131 42.0
Nitab4.5_0000462g0200 Nicotiana tabacum HOM05D000761 ORTHO05D001062 7.1e-17 92.0 282 50.0
Glyma.15G083800 Glycine max HOM05D000761 ORTHO05D001062 2.1e-16 90.5 259 43.2
Peaxi162Scf00734g00066 Petunia axillaris HOM05D000761 ORTHO05D001062 4.6e-16 89.4 236 56.4
Phvul.002G238900 Phaseolus vulgaris HOM05D000761 ORTHO05D001062 6.0e-16 89.0 128 44.5
PGSC0003DMG400003175 Solanum tuberosum HOM05D000761 ORTHO05D001062 7.8e-16 88.6 173 35.8
AT4G18640 Arabidopsis thaliana HOM05D000761 ORTHO05D001062 1.7e-15 87.4 237 42.2
PGR042G1799 Punica granatum HOM05D000761 ORTHO05D001062 1.7e-15 87.4 245 42.4
Migut.M01029 Erythranthe guttata HOM05D000761 ORTHO05D001062 2.3e-15 87.0 146 41.1
MSTRG.16156 Avicennia marina HOM05D000761 ORTHO05D001062 3.9e-15 86.3 131 43.5
DCAR_005213 Daucus carota HOM05D000761 ORTHO05D001062 1.1e-14 84.7 243 49.8
AT5G45840 Arabidopsis thaliana HOM05D000761 ORTHO05D001062 1.5e-14 84.3 244 42.6
CARHR176130 Cardamine hirsuta HOM05D000761 ORTHO05D001062 1.9e-14 84.0 239 43.9
Carub.0007s2258 Capsella rubella HOM05D000761 ORTHO05D001062 2.5e-14 83.6 254 39.8
AL7G35620 Arabidopsis lyrata HOM05D000761 ORTHO05D001062 3.3e-14 83.2 237 34.6
CARHR225500 Cardamine hirsuta HOM05D000761 ORTHO05D001062 9.5e-14 81.6 245 40.4
AL8G12730 Arabidopsis lyrata HOM05D000761 ORTHO05D001062 1.2e-13 81.3 258 47.3
Thhalv10000802m.g Eutrema salsugineum HOM05D000761 ORTHO05D001062 4.7e-13 79.3 239 47.7
Thhalv10024616m.g Eutrema salsugineum HOM05D000761 ORTHO05D001062 4.7e-13 79.3 253 40.7
SGA_v2.0_scaffold1G00060 Striga asiatica HOM05D000761 ORTHO05D001062 6.2e-13 79.0 254 51.6
BcaNung06919 Brassica carinata HOM05D000761 ORTHO05D001062 8.1e-13 78.6 237 42.2
BolC1t01237H Brassica oleracea HOM05D000761 ORTHO05D001062 1.1e-12 78.2 237 41.4
C01p12600 Brassica napus HOM05D000761 ORTHO05D001062 4.0e-12 76.3 237 40.9
Carub.0008s0212 Capsella rubella HOM05D000761 ORTHO05D001062 6.8e-12 75.5 241 46.9
Hund21169 Selenicereus undatus HOM05D000761 ORTHO05D001062 6.8e-12 75.5 247 53.0
VMungo0251G3476 Vigna mungo HOM05D000761 ORTHO05D001062 6.8e-12 75.5 101 46.5
A01p10680 Brassica napus HOM05D000761 ORTHO05D001062 1.2e-11 74.7 237 40.1
BraA01t01014Z Brassica rapa HOM05D000761 ORTHO05D001062 1.2e-11 74.7 237 40.1
Phvul.006G175100 Phaseolus vulgaris HOM05D000761 ORTHO05D001062 1.2e-11 74.7 117 43.6
BcaC03g16791 Brassica carinata HOM05D000761 ORTHO05D001062 1.7e-10 70.9 240 41.7
BolC2t10718H Brassica oleracea HOM05D000761 ORTHO05D001062 1.7e-10 70.9 240 41.7
BcaB07g30429 Brassica carinata HOM05D000761 ORTHO05D001062 2.2e-10 70.5 239 33.5
BraA02t07966Z Brassica rapa HOM05D000761 ORTHO05D001062 2.2e-10 70.5 240 41.7
BcaC06g31510 Brassica carinata HOM05D000761 ORTHO05D001062 1.1e-09 68.2 257 39.3
BraA06t27493Z Brassica rapa HOM05D000761 ORTHO05D001062 1.1e-09 68.2 239 42.7
Glyma.08G116600 Glycine max HOM05D000761 ORTHO05D001062 1.1e-09 68.2 95 49.5
HanXRQChr16g0518291 Helianthus annuus HOM05D000761 ORTHO05D001062 1.1e-09 68.2 204 53.9
A06p46320 Brassica napus HOM05D000761 ORTHO05D001062 1.4e-09 67.8 239 41.4
BolC7t43456H Brassica oleracea HOM05D000761 ORTHO05D001062 1.4e-09 67.8 239 41.8
Aa31LG9G7220 Aethionema arabicum HOM05D000761 ORTHO05D001062 1.9e-09 67.4 263 45.6
BcaC06g34391 Brassica carinata HOM05D000761 ORTHO05D001062 2.4e-09 67.0 239 46.9
C07p29130 Brassica napus HOM05D000761 ORTHO05D001062 2.4e-09 67.0 239 46.9
FAN16G0576 Fragaria x ananassa HOM05D000761 ORTHO05D001062 5.4e-09 65.9 134 37.3
Sp2g10760 Schrenkiella parvula HOM05D000761 ORTHO05D001062 2.7e-08 63.5 145 34.5
Nitab4.5_0003711g0070 Nicotiana tabacum HOM05D000761 ORTHO05D001062 5.1e-07 59.3 233 52.8
Sp7g15380 Schrenkiella parvula HOM05D000761 ORTHO05D001062 6.6e-07 58.9 151 48.3
Aa31LG6G1390 Aethionema arabicum HOM05D000761 ORTHO05D001062 1.1e-06 58.2 114 36.8
arahy.Tifrunner.gnm1.ann1.SU3JCE Arachis hypogaea HOM05D000761 ORTHO05D001062 3.3e-06 56.6 88 48.9
arahy.Tifrunner.gnm1.ann1.57KVCX Arachis hypogaea HOM05D000761 ORTHO05D001062 7.3e-06 55.5 88 48.9


User provided reference genes

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