Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 1.9e-84 315.8 164 100.0
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 1.4e-55 219.9 132 84.8
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 4.3e-36 155.2 130 61.5
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 1.2e-35 153.7 137 60.6
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 2.8e-35 152.5 135 61.5
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 6.2e-35 151.4 146 55.5
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 1.4e-34 150.2 133 58.6
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 1.4e-34 150.2 129 62.8
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 6.8e-34 147.9 142 55.6
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 6.8e-34 147.9 139 57.6
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 7.5e-33 144.4 158 49.4
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 9.8e-33 144.1 135 60.0
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 1.3e-32 143.7 129 58.1
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 8.3e-32 141.0 144 59.0
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 2.4e-31 139.4 151 52.3
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 1.0e-29 134.0 134 53.7
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 1.7e-29 133.3 142 55.6
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 2.3e-29 132.9 129 56.6
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 2.3e-29 132.9 127 56.7
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 3.0e-29 132.5 152 50.7
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 3.0e-29 132.5 143 53.1
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 5.0e-29 131.7 133 55.6
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 5.0e-29 131.7 133 52.6
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 1.5e-28 130.2 133 56.4
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 1.5e-28 130.2 129 56.6
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 1.9e-28 129.8 135 60.7
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 5.6e-28 128.3 149 51.0
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 7.3e-28 127.9 133 54.9
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 9.5e-28 127.5 134 50.7
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 9.5e-28 127.5 134 50.7
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 1.6e-27 126.7 133 57.1
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 3.6e-27 125.6 112 59.8
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 4.7e-27 125.2 140 48.6
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 4.7e-27 125.2 137 53.3
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 6.2e-27 124.8 150 54.7
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 1.1e-26 124.0 127 52.0
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 1.1e-26 124.0 195 45.1
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 2.3e-26 122.9 138 50.7
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 3.1e-26 122.5 149 47.7
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 4.0e-26 122.1 150 48.0
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 5.2e-26 121.7 145 47.6
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 8.9e-26 120.9 118 60.2
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 1.2e-25 120.6 127 57.5
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 1.2e-25 120.6 149 49.0
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 1.5e-25 120.2 127 56.7
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 1.5e-25 120.2 133 54.9
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 2.6e-25 119.4 141 48.9
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 4.4e-25 118.6 133 53.4
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 1.3e-24 117.1 136 52.2
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 1.3e-24 117.1 131 46.6
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 1.7e-24 116.7 145 46.2
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 1.7e-24 116.7 118 59.3
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 1.7e-24 116.7 132 51.5
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 2.2e-24 116.3 145 47.6
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 2.2e-24 116.3 133 51.9
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 2.9e-24 115.9 143 46.2
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 3.7e-24 115.5 129 49.6
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 6.4e-24 114.8 141 47.5
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 6.4e-24 114.8 111 60.4
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 6.4e-24 114.8 140 50.7
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 1.1e-23 114.0 178 42.1
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 1.1e-23 114.0 141 48.9
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 1.4e-23 113.6 140 43.6
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 1.9e-23 113.2 141 46.1
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 2.4e-23 112.8 143 44.1
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 3.2e-23 112.5 141 43.3
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 4.1e-23 112.1 152 43.4
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 4.1e-23 112.1 140 45.0
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 7.1e-23 111.3 129 47.3
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 7.1e-23 111.3 150 44.0
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 9.2e-23 110.9 82 68.3
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 9.2e-23 110.9 118 59.3
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 9.2e-23 110.9 129 45.7
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 2.1e-22 109.8 140 46.4
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 3.5e-22 109.0 111 56.8
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 6.0e-22 108.2 141 41.8
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 6.0e-22 108.2 141 41.8
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 6.0e-22 108.2 140 44.3
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 3.0e-21 105.9 144 45.8
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 3.9e-21 105.5 143 48.3
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 5.1e-21 105.1 137 43.1
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 8.6e-21 104.4 129 52.7
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 8.6e-21 104.4 88 60.2
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 1.1e-20 104.0 134 44.8
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 5.6e-20 101.7 120 57.5
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 7.3e-20 101.3 150 42.7
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 6.2e-19 98.2 101 49.5
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 8.1e-19 97.8 143 44.1
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 1.1e-18 97.4 121 47.9
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.1e-18 97.4 80 60.0
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 1.4e-18 97.1 121 47.1
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 1.8e-18 96.7 138 50.0
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 2.4e-18 96.3 127 47.2
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 3.1e-18 95.9 75 65.3
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 1.2e-17 94.0 146 40.4
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 4.9e-16 88.6 139 41.0
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 4.6e-14 82.0 83 51.8
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 5.1e-13 78.6 84 50.0
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 6.6e-13 78.2 133 37.6
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 4.2e-07 58.9 63 50.8


User provided reference genes

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