Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40619 Davidia involucrata HOM05D006452 ORTHO05D008068 2.5e-259 898.3 453 100.0
Hma1.2p1_1465F.1_g285350 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 7.5e-192 674.1 451 76.5
CSS0041533 Camellia sinensis var. sinensis HOM05D006452 ORTHO05D008068 1.2e-178 630.2 451 70.5
TAR629G0815 Trochodendron aralioides HOM05D006452 ORTHO05D008068 2.1e-178 629.4 453 69.8
QL05p043485 Quercus lobata HOM05D006452 ORTHO05D008068 1.2e-176 623.6 451 69.6
Cfa000544 Carpinus fangiana HOM05D006452 ORTHO05D008068 1.7e-175 619.8 451 68.3
Actinidia39488 Actinidia chinensis HOM05D006452 ORTHO05D008068 1.6e-173 613.2 455 67.0
GSVIVG01021140001 Vitis vinifera HOM05D006452 ORTHO05D008068 1.3e-172 610.1 456 68.4
CiPaw.09G065500 Carya illinoinensis HOM05D006452 ORTHO05D008068 1.1e-169 600.5 451 65.9
Ciclev10014636m.g Citrus clementina HOM05D006452 ORTHO05D008068 4.9e-167 591.7 451 66.5
Lj1A1199G43 Lonicera japonica HOM05D006452 ORTHO05D008068 4.9e-167 591.7 456 67.3
MD05G1308100 Malus domestica HOM05D006452 ORTHO05D008068 6.4e-167 591.3 454 65.0
RcHm_v2.0_Chr5g0009531 Rosa chinensis HOM05D006452 ORTHO05D008068 6.0e-165 584.7 455 64.8
FvH4_3g08370 Fragaria vesca HOM05D006452 ORTHO05D008068 1.9e-163 579.7 454 64.3
Thecc.06G178700 Theobroma cacao HOM05D006452 ORTHO05D008068 2.8e-162 575.9 451 62.3
Nn1g06365 Nelumbo nucifera HOM05D006452 ORTHO05D008068 1.1e-161 573.9 456 62.9
Gorai.010G157000 Gossypium raimondii HOM05D006452 ORTHO05D008068 1.4e-161 573.5 451 62.3
Prupe.4G054700 Prunus persica HOM05D006452 ORTHO05D008068 2.4e-161 572.8 443 65.7
Rhsim02G0137400 Rhododendron simsii HOM05D006452 ORTHO05D008068 2.9e-159 565.8 487 59.8
Duzib235G0445 Durio zibethinus HOM05D006452 ORTHO05D008068 4.9e-159 565.1 452 61.7
Gohir.D06G135100 Gossypium hirsutum HOM05D006452 ORTHO05D008068 5.5e-158 561.6 452 61.7
Gohir.A06G134400 Gossypium hirsutum HOM05D006452 ORTHO05D008068 1.6e-157 560.1 451 61.0
CANSAT35G2027 Cannabis sativa HOM05D006452 ORTHO05D008068 3.5e-157 558.9 456 62.5
Sabra04G0032100 Salix brachista HOM05D006452 ORTHO05D008068 4.6e-157 558.5 475 59.2
Oeu001094.1 Olea europaea HOM05D006452 ORTHO05D008068 2.3e-156 556.2 450 60.4
Manes.17G051000 Manihot esculenta HOM05D006452 ORTHO05D008068 2.1e-154 549.7 453 60.7
Ca_00397_v3 Cicer arietinum L. HOM05D006452 ORTHO05D008068 1.2e-152 543.9 450 61.1
TWI38G0383 Tripterygium wilfordii HOM05D006452 ORTHO05D008068 4.9e-151 538.5 454 61.2
Medtr2g014890 Medicago truncatula HOM05D006452 ORTHO05D008068 1.4e-150 537.0 450 59.8
Nitab4.5_0001375g0100 Nicotiana tabacum HOM05D006452 ORTHO05D008068 7.1e-150 534.6 455 60.9
FAN16G3312 Fragaria x ananassa HOM05D006452 ORTHO05D008068 1.0e-148 530.8 421 63.2
Glyma.10G069100 Glycine max HOM05D006452 ORTHO05D008068 3.0e-148 529.3 450 59.6
Potri.004G051000 Populus trichocarpa HOM05D006452 ORTHO05D008068 9.7e-147 524.2 421 60.8
Nitab4.5_0000516g0020 Nicotiana tabacum HOM05D006452 ORTHO05D008068 1.3e-146 523.9 449 60.1
ECA234G2428 Erigeron canadensis HOM05D006452 ORTHO05D008068 2.8e-146 522.7 453 60.9
FAN25G3335 Fragaria x ananassa HOM05D006452 ORTHO05D008068 8.2e-146 521.2 451 58.8
Lj6g0021964 Lotus japonicus HOM05D006452 ORTHO05D008068 8.2e-146 521.2 451 58.5
Glyma.13G152304 Glycine max HOM05D006452 ORTHO05D008068 6.9e-145 518.1 449 58.8
PGSC0003DMG400012819 Solanum tuberosum HOM05D006452 ORTHO05D008068 2.6e-144 516.2 452 60.6
COL.COLO4_31396 Corchorus olitorius HOM05D006452 ORTHO05D008068 1.0e-143 514.2 416 60.8
Cc00_g07720 Coffea canephora HOM05D006452 ORTHO05D008068 8.5e-143 511.1 452 58.2
Aqoxy4G00567 Aquilegia oxysepala HOM05D006452 ORTHO05D008068 1.1e-142 510.8 469 57.1
Phvul.006G180500 Phaseolus vulgaris HOM05D006452 ORTHO05D008068 1.9e-142 510.0 452 57.5
Sopen03g002290 Solanum pennellii HOM05D006452 ORTHO05D008068 9.4e-142 507.7 453 59.4
FAN21G3590 Fragaria x ananassa HOM05D006452 ORTHO05D008068 1.6e-141 506.9 455 58.7
Lalb_Chr18g0059351 Lupinus albus HOM05D006452 ORTHO05D008068 2.7e-141 506.1 452 58.2
VMungo0540G0818 Vigna mungo HOM05D006452 ORTHO05D008068 1.8e-140 503.4 451 57.9
Migut.M01092 Erythranthe guttata HOM05D006452 ORTHO05D008068 3.9e-140 502.3 449 57.0
Sed0012413 Sechium edule HOM05D006452 ORTHO05D008068 5.1e-140 501.9 452 57.3
Carub.0001s2699 Capsella rubella HOM05D006452 ORTHO05D008068 4.3e-139 498.8 451 55.7
AL1G42150 Arabidopsis lyrata HOM05D006452 ORTHO05D008068 1.7e-138 496.9 455 56.5
Lsat_1_v5_gn_4_51620 Lactuca sativa HOM05D006452 ORTHO05D008068 1.7e-138 496.9 456 57.2
AT1G28530 Arabidopsis thaliana HOM05D006452 ORTHO05D008068 2.8e-138 496.1 455 56.5
Sp1g24780 Schrenkiella parvula HOM05D006452 ORTHO05D008068 6.3e-138 495.0 451 54.3
CARHR028010 Cardamine hirsuta HOM05D006452 ORTHO05D008068 1.4e-137 493.8 452 55.3
arahy.Tifrunner.gnm1.ann1.FLUH97 Arachis hypogaea HOM05D006452 ORTHO05D008068 1.2e-136 490.7 451 55.7
BcaC01g00067 Brassica carinata HOM05D006452 ORTHO05D008068 1.2e-136 490.7 452 54.2
FAN11G3013 Fragaria x ananassa HOM05D006452 ORTHO05D008068 2.6e-136 489.6 451 57.6
Thhalv10007091m.g Eutrema salsugineum HOM05D006452 ORTHO05D008068 3.4e-136 489.2 455 55.8
THA.LOC104812622 Tarenaya hassleriana HOM05D006452 ORTHO05D008068 3.4e-136 489.2 452 56.4
BcaB03g12098 Brassica carinata HOM05D006452 ORTHO05D008068 1.3e-135 487.3 452 54.2
HanXRQChr16g0518591 Helianthus annuus HOM05D006452 ORTHO05D008068 6.5e-135 485.0 454 56.8
arahy.Tifrunner.gnm1.ann1.228Z0R Arachis hypogaea HOM05D006452 ORTHO05D008068 1.9e-134 483.4 451 55.2
A08p25460 Brassica napus HOM05D006452 ORTHO05D008068 1.9e-134 483.4 453 53.9
C03p75340 Brassica napus HOM05D006452 ORTHO05D008068 1.9e-134 483.4 456 54.4
BolC3t19793H Brassica oleracea HOM05D006452 ORTHO05D008068 4.2e-134 482.3 453 53.4
BraA08t34497Z Brassica rapa HOM05D006452 ORTHO05D008068 7.2e-134 481.5 453 53.6
MELO3C007247.2 Cucumis melo HOM05D006452 ORTHO05D008068 1.4e-132 477.2 452 54.9
AUR62014896 Chenopodium quinoa HOM05D006452 ORTHO05D008068 3.9e-132 475.7 457 56.2
ClCG01G023380 Citrullus lanatus HOM05D006452 ORTHO05D008068 5.1e-132 475.3 492 51.6
AUR62031101 Chenopodium quinoa HOM05D006452 ORTHO05D008068 4.4e-131 472.2 457 55.8
SalBow8G3895 Salvia bowleyana HOM05D006452 ORTHO05D008068 4.4e-131 472.2 472 53.0
Atru.chr10.1767 Acer truncatum HOM05D006452 ORTHO05D008068 5.7e-131 471.9 378 62.2
Haze_06337 Corylus avellana HOM05D006452 ORTHO05D008068 1.1e-129 467.6 497 51.9
EL10Ac8g20457 Beta vulgaris HOM05D006452 ORTHO05D008068 9.1e-129 464.5 482 53.1
PSO832G2664 Papaver somniferum HOM05D006452 ORTHO05D008068 2.5e-126 456.4 542 47.0
Aa31LG6G11040 Aethionema arabicum HOM05D006452 ORTHO05D008068 4.2e-126 455.7 546 46.9
PSO210G4080 Papaver somniferum HOM05D006452 ORTHO05D008068 1.8e-124 450.3 538 46.5
SGA_v2.0_scaffold16G07655 Striga asiatica HOM05D006452 ORTHO05D008068 4.2e-118 429.1 449 49.9
Hma1.2p1_1465F.1_g285340 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 3.6e-117 426.0 298 75.2
CsaV3_6G050510 Cucumis sativus L. HOM05D006452 ORTHO05D008068 6.1e-117 425.2 419 52.3
CDE10G0189 Ceratophyllum demersum HOM05D006452 ORTHO05D008068 1.2e-112 411.0 458 49.3
MBI07_g32549_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.5e-110 404.1 428 52.1
Solyc03g006280.4 Solanum lycopersicum HOM05D006452 ORTHO05D008068 1.8e-108 397.1 452 50.7
ATR0602G160 Amborella trichopoda HOM05D006452 ORTHO05D008068 2.4e-105 386.7 480 45.4
TPR.G11703 Trifolium pratense HOM05D006452 ORTHO05D008068 1.7e-103 380.6 315 60.3
DCAR_006579 Daucus carota HOM05D006452 ORTHO05D008068 1.9e-102 377.1 442 48.0
Peaxi162Scf01018g00215 Petunia axillaris HOM05D006452 ORTHO05D008068 2.0e-99 367.1 451 46.6
Cpa.g.sc7.8 Carica papaya HOM05D006452 ORTHO05D008068 5.4e-97 359.0 300 61.7
Os02g0109900 Oryza sativa ssp. japonica HOM05D006452 ORTHO05D008068 2.9e-95 353.2 469 42.9
unitig_8.g4630 Utricularia gibba HOM05D006452 ORTHO05D008068 1.1e-94 351.3 450 42.4
Sc17g0005860 Simmondsia chinensis HOM05D006452 ORTHO05D008068 1.0e-92 344.7 455 44.6
MBI07_g06446_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 4.9e-90 335.9 447 44.1
CAN.G189.65 Capsicum annuum HOM05D006452 ORTHO05D008068 1.4e-89 334.3 299 60.5
HPP92_000497 Vanilla planifolia HOM05D006452 ORTHO05D008068 7.0e-89 332.0 469 42.0
Zm00001eb229620 Zea mays HOM05D006452 ORTHO05D008068 3.3e-86 323.2 471 41.2
PGR004G2109 Punica granatum HOM05D006452 ORTHO05D008068 3.4e-83 313.2 285 56.5
Psat1g201640 Pisum sativum HOM05D006452 ORTHO05D008068 1.6e-80 304.3 236 63.1
vmacro15945 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 7.8e-80 302.0 236 64.0
Eucgr.D00580 Eucalyptus grandis HOM05D006452 ORTHO05D008068 2.2e-74 283.9 275 54.5
Hund23835 Selenicereus undatus HOM05D006452 ORTHO05D008068 2.4e-73 280.4 308 50.3
vmacro15946 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 3.1e-60 236.9 267 47.6
TPR.G10795 Trifolium pratense HOM05D006452 ORTHO05D008068 9.9e-59 231.9 210 57.6
CAN.G801.36 Capsicum annuum HOM05D006452 ORTHO05D008068 4.6e-56 223.0 200 58.0
CAN.G1286.36 Capsicum annuum HOM05D006452 ORTHO05D008068 6.0e-56 222.6 174 64.4
Psat1g201600 Pisum sativum HOM05D006452 ORTHO05D008068 2.1e-53 214.2 198 56.6
Lsat_1_v5_gn_9_9480 Lactuca sativa HOM05D006452 ORTHO05D008068 5.6e-46 189.5 221 46.6
Mapoly0052s0014 Marchantia polymorpha HOM05D006452 ORTHO05D008068 3.1e-44 183.7 479 28.8
SEGI_16257 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 1.2e-32 145.2 302 35.4
unitig_8.g4641 Utricularia gibba HOM05D006452 ORTHO05D008068 1.8e-31 141.4 155 47.1
AagrBONN_evm.TU.Sc2ySwM_228.5590 Anthoceros agrestis HOM05D006452 ORTHO05D008068 3.9e-31 140.2 506 27.3
SEGI_13408 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 1.5e-30 138.3 197 37.1
CAN.G638.7 Capsicum annuum HOM05D006452 ORTHO05D008068 2.6e-19 100.9 176 39.8
GSVIVG01026713001 Vitis vinifera HOM05D006452 ORTHO05D008068 5.0e-18 96.7 63 76.2
MBI05_g40582_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D029689 4.1e-12 77.0 87 51.7
MBI05_g44052_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.5e-11 75.1 72 56.9
FvH4_3g08350 Fragaria vesca HOM05D003433 ORTHO05D003921 7.7e-11 72.8 49 63.3
CAN.G404.26 Capsicum annuum HOM05D006452 ORTHO05D008068 2.3e-07 61.2 61 47.5
MBI05_g22668_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 3.0e-07 60.8 62 53.2


User provided reference genes

Program Settings