Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40604 Davidia involucrata HOM05D009738 ORTHO05D011821 6.6e-125 451.1 288 100.0
Dinv10885 Davidia involucrata HOM05D009738 ORTHO05D011821 7.9e-102 374.4 258 95.0
vmacro07382 Vaccinium macrocarpon HOM05D009738 ORTHO05D011821 6.3e-59 231.9 278 50.0
vmacro04017 Vaccinium macrocarpon HOM05D009738 ORTHO05D011821 1.1e-58 231.1 267 57.3
Dinv12689 Davidia involucrata HOM05D009738 ORTHO05D011821 2.2e-56 223.4 171 88.3
Dinv32094 Davidia involucrata HOM05D009738 ORTHO05D011821 3.0e-53 213.0 165 74.5
RhsimUnG0078100 Rhododendron simsii HOM05D009738 ORTHO05D011821 1.5e-52 210.7 276 49.3
Dinv19453 Davidia involucrata HOM05D009738 ORTHO05D011821 1.3e-51 207.6 138 79.0
Dinv41014 Davidia involucrata HOM05D001668 ORTHO05D001693 1.0e-48 198.0 164 62.2
Dinv23410 Davidia involucrata HOM05D009738 ORTHO05D011821 8.5e-48 194.9 170 68.2
Dinv32859 Davidia involucrata HOM05D009738 ORTHO05D011821 1.2e-46 191.0 121 95.0
Dinv23708 Davidia involucrata HOM05D009738 ORTHO05D011821 4.7e-46 189.1 113 92.9
Dinv05726 Davidia involucrata HOM05D009738 ORTHO05D011821 2.3e-45 186.8 130 84.6
Dinv22307 Davidia involucrata HOM05D009738 ORTHO05D011821 1.7e-43 180.6 167 70.1
Rhsim13G0212700 Rhododendron simsii HOM05D002367 ORTHO05D011821 7.0e-42 175.3 168 58.9
Dinv16230 Davidia involucrata HOM05D009738 ORTHO05D011821 7.7e-41 171.8 130 64.6
Dinv01257 Davidia involucrata HOM05D009738 ORTHO05D011821 1.3e-40 171.0 108 86.1
Hma1.2p1_1287F.1_g273260 Hydrangea macrophylla HOM05D009738 ORTHO05D011821 9.8e-36 154.8 278 47.1
Dinv12449 Davidia involucrata HOM05D009738 ORTHO05D011821 1.3e-35 154.5 168 66.7
Dinv38656 Davidia involucrata HOM05D009738 ORTHO05D011821 3.5e-33 146.4 182 50.5
Dinv28075 Davidia involucrata HOM05D009738 ORTHO05D011821 3.4e-28 129.8 107 57.9
Rhsim03G0079000 Rhododendron simsii HOM05D009738 ORTHO05D011821 2.9e-27 126.7 136 54.4
Dinv02924 Davidia involucrata HOM05D000148 ORTHO05D000081 5.4e-26 122.5 172 60.5
Dinv20849 Davidia involucrata HOM05D009738 ORTHO05D011821 3.9e-24 116.3 278 41.0
Dinv01514 Davidia involucrata HOM05D009738 ORTHO05D011821 3.0e-16 90.1 53 88.7
Rhsim06G0077400 Rhododendron simsii HOM05D009738 ORTHO05D011821 3.0e-16 90.1 131 51.9
Dinv31581 Davidia involucrata HOM05D009738 ORTHO05D011821 4.0e-13 79.7 105 49.5
CiPaw.15G037700 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.2e-13 79.3 169 30.2
CiPaw.01G307400 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.6e-12 77.0 169 29.6
CiPaw.08G134700 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.6e-12 77.0 169 29.6
CiPaw.08G157400 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.6e-12 77.0 169 29.6
CiPaw.03G129800 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.5e-12 75.5 187 28.3
CiPaw.14G060500 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.8e-12 75.1 182 28.0
CiPaw.15G050900 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.7e-11 73.2 168 29.2
RcHm_v2.0_Chr2g0105031 Rosa chinensis HOM05D001576 ORTHO05D010219 1.1e-10 71.6 192 28.6
RcHm_v2.0_Chr7g0231991 Rosa chinensis HOM05D001576 ORTHO05D010219 1.1e-10 71.6 192 28.6
vmacro14205 Vaccinium macrocarpon HOM05D009738 ORTHO05D011821 1.9e-10 70.9 122 50.8
FvH4_3g29014 Fragaria vesca HOM05D001576 ORTHO05D000401 3.2e-10 70.1 194 28.9
FvH4_7g13271 Fragaria vesca HOM05D001576 ORTHO05D000401 5.4e-10 69.3 194 28.4
TWI12G0266 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 5.4e-10 69.3 148 32.4
CiPaw.01G132500 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.5e-09 66.6 152 30.3
Ciclev10003979m.g Citrus clementina HOM05D001576 ORTHO05D000401 3.5e-09 66.6 170 31.2
Hma1.2p1_0324F.1_g125640 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 3.5e-09 66.6 196 29.1
CiPaw.05G126800 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.6e-09 66.2 190 28.9
CiPaw.09G088900 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.0e-09 65.9 66 45.5
CiPaw.14G121300 Carya illinoinensis HOM05D001576 ORTHO05D010219 7.8e-09 65.5 193 30.1
CiPaw.01G121200 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.0e-08 65.1 169 27.8
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.3e-08 64.7 193 29.5
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.3e-08 64.7 193 29.5
CANSAT01G3197 Cannabis sativa HOM05D001576 ORTHO05D010219 1.3e-08 64.7 192 31.2
CiPaw.06G051800 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.3e-08 64.7 66 43.9
Prupe.1G172500 Prunus persica HOM05D001576 ORTHO05D000401 1.3e-08 64.7 153 30.7
QL06p052750 Quercus lobata HOM05D001576 ORTHO05D000401 1.3e-08 64.7 65 46.2
QL06p053821 Quercus lobata HOM05D001576 ORTHO05D000401 1.3e-08 64.7 90 36.7
TWI31G0938 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.3e-08 64.7 149 32.2
Atru.chr2.387 Acer truncatum HOM05D036501 ORTHO05D030764 1.7e-08 64.3 239 25.9
CiPaw.10G155100 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.7e-08 64.3 73 45.2
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.3e-08 63.9 193 29.5
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.3e-08 63.9 193 29.5
CiPaw.11G164500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.3e-08 63.9 190 27.9
CiPaw.16G006000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.3e-08 63.9 66 45.5
Hma1.2p1_1313F.1_g274940 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 2.3e-08 63.9 174 30.5
SGA_v2.0_scaffold11G05878 Striga asiatica HOM05D001576 ORTHO05D000401 2.3e-08 63.9 200 28.5
SGA_v2.0_scaffold239G43990 Striga asiatica HOM05D001576 ORTHO05D000401 2.3e-08 63.9 200 28.5
Atru.chr2.382 Acer truncatum HOM05D036501 ORTHO05D030764 3.9e-08 63.2 240 25.0
CiPaw.03G198300 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.1e-08 62.8 66 43.9
TWI56G0559 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 5.1e-08 62.8 202 26.2
TWI74G1447 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 5.1e-08 62.8 202 26.2
Dinv16231 Davidia involucrata HOM05D009738 ORTHO05D011821 6.6e-08 62.4 49 69.4
TWI56G0638 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 8.6e-08 62.0 202 26.2
Atru.chr13.1502 Acer truncatum HOM05D036501 ORTHO05D030764 1.1e-07 61.6 69 33.3
Aqoxy1G01456 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 1.1e-07 61.6 107 34.6
CiPaw.14G040600 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-07 61.6 69 39.1
CiPaw.15G112900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-07 61.6 147 29.9
TWI74G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.1e-07 61.6 152 28.9
CiPaw.02G030800 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.9e-07 60.8 163 25.8
CiPaw.12G051300 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.9e-07 60.8 190 27.4
CiPaw.03G089300 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.3e-07 60.1 66 43.9
CiPaw.06G026600 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.3e-07 60.1 149 30.2
Prupe.2G026400 Prunus persica HOM05D001576 ORTHO05D000401 3.3e-07 60.1 138 34.1
FvH4_3g26413 Fragaria vesca HOM05D001576 ORTHO05D000401 4.3e-07 59.7 194 27.8
MD07G1026100 Malus domestica HOM05D001576 ORTHO05D000401 4.3e-07 59.7 149 32.2
CiPaw.01G075100 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.5e-07 58.5 178 30.9
CiPaw.01G092600 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.5e-07 58.5 180 28.9
CiPaw.03G181800 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.5e-07 58.5 190 27.9
CiPaw.09G174900 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.5e-07 58.5 178 26.4
CiPaw.15G027200 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.5e-07 58.5 179 29.1
TWI23G1120 Tripterygium wilfordii HOM05D020473 ORTHO05D000401 9.5e-07 58.5 150 27.3
CSS0006274 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-06 58.2 196 27.0
Os12g0228500 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 1.2e-06 58.2 147 29.3
Potri.010G014250 Populus trichocarpa HOM05D001576 ORTHO05D010219 1.2e-06 58.2 66 34.8
TWI23G0178 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 1.2e-06 58.2 121 33.1
TWI38G0149 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 1.2e-06 58.2 178 28.7
CSS0000195 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.6e-06 57.8 196 27.0
CSS0003077 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.6e-06 57.8 196 27.0
CSS0019281 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.6e-06 57.8 196 27.0
CSS0021750 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.6e-06 57.8 196 27.0
CSS0042573 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.6e-06 57.8 196 27.0
Os12g0169300 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 1.6e-06 57.8 147 29.3
TPR.G23664 Trifolium pratense HOM05D000589 ORTHO05D000401 1.6e-06 57.8 72 36.1
CSS0009093 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.1e-06 57.4 196 27.0
CSS0039293 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.1e-06 57.4 196 27.0
CiPaw.01G070200 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.1e-06 57.4 69 39.1
CiPaw.01G283500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.1e-06 57.4 177 29.4
CiPaw.05G236500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.1e-06 57.4 69 40.6
CiPaw.06G027900 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.1e-06 57.4 149 29.5
CiPaw.07G048000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.1e-06 57.4 181 28.2
CiPaw.07G178300 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.1e-06 57.4 69 40.6
CiPaw.09G014300 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.1e-06 57.4 69 40.6
CiPaw.10G028800 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.1e-06 57.4 69 40.6
CiPaw.10G139700 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.1e-06 57.4 69 40.6
CiPaw.11G197100 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.1e-06 57.4 177 29.4
CiPaw.14G108500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.1e-06 57.4 177 29.4
CiPaw.14G134600 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.1e-06 57.4 69 40.6
TWI36G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.1e-06 57.4 152 28.3
CiPaw.01G033500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.8e-06 57.0 69 40.6
Os06g0635500 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 2.8e-06 57.0 79 39.2
CiPaw.02G131900 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.6e-06 56.6 69 40.6
CiPaw.03G152100 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.6e-06 56.6 69 40.6
CiPaw.04G113500 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.6e-06 56.6 167 24.6
CiPaw.13G033200 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.6e-06 56.6 69 40.6
CiPaw.13G160200 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.6e-06 56.6 69 40.6
CiPaw.03G069900 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.7e-06 56.2 77 39.0
CiPaw.07G147000 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.7e-06 56.2 69 40.6
CiPaw.10G126200 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.7e-06 56.2 66 40.9
RhsimUnG0137500 Rhododendron simsii HOM05D001576 ORTHO05D000401 4.7e-06 56.2 179 29.1
TWI74G0018 Tripterygium wilfordii HOM05D020473 ORTHO05D026208 4.7e-06 56.2 169 29.0
CiPaw.12G041600 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.2e-06 55.8 209 30.1
CiPaw.12G107800 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.2e-06 55.8 71 38.0
Ciclev10018206m.g Citrus clementina HOM05D001576 ORTHO05D000401 6.2e-06 55.8 183 27.9
Rhsim07G0066400 Rhododendron simsii HOM05D001576 ORTHO05D000401 6.2e-06 55.8 139 30.2
Rhsim13G0070800 Rhododendron simsii HOM05D001576 ORTHO05D000401 6.2e-06 55.8 66 39.4
RhsimUnG0111600 Rhododendron simsii HOM05D001576 ORTHO05D000401 6.2e-06 55.8 139 30.2
CiPaw.01G110200 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.1e-06 55.5 69 40.6
Haze_12994 Corylus avellana HOM05D001576 ORTHO05D000401 8.1e-06 55.5 189 27.5
Medtr7g088160 Medicago truncatula HOM05D002397 ORTHO05D000401 8.1e-06 55.5 66 36.4
Rhsim03G0149900 Rhododendron simsii HOM05D001576 ORTHO05D000401 8.1e-06 55.5 193 22.8
TWI23G0314 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 8.1e-06 55.5 197 26.9
TWI56G1359 Tripterygium wilfordii HOM05D020473 ORTHO05D026208 8.1e-06 55.5 160 25.0


User provided reference genes

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