Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40597 Davidia involucrata HOM05D007507 ORTHO05D009420 2.5e-69 265.4 140 100.0
Dinv17350 Davidia involucrata HOM05D007507 ORTHO05D009420 7.3e-45 184.1 143 72.7
GSVIVG01021107001 Vitis vinifera HOM05D007507 ORTHO05D009420 7.3e-37 157.5 149 61.1
Potri.011G057400 Populus trichocarpa HOM05D007507 ORTHO05D009420 3.1e-35 152.1 151 58.3
Actinidia16570 Actinidia chinensis HOM05D007507 ORTHO05D009420 2.6e-34 149.1 150 56.7
TAR626G1744 Trochodendron aralioides HOM05D007507 ORTHO05D009420 3.4e-34 148.7 141 61.0
Thecc.06G181600 Theobroma cacao HOM05D007507 ORTHO05D009420 4.5e-34 148.3 147 56.5
CSS0001598 Camellia sinensis var. sinensis HOM05D007507 ORTHO05D009420 9.9e-34 147.1 150 58.7
Duzib192G0611 Durio zibethinus HOM05D007507 ORTHO05D009420 9.9e-34 147.1 146 56.8
QL05p042078 Quercus lobata HOM05D007507 ORTHO05D009420 8.4e-33 144.1 141 56.0
Actinidia05654 Actinidia chinensis HOM05D007507 ORTHO05D009420 3.2e-32 142.1 148 56.1
Potri.004G048201 Populus trichocarpa HOM05D007507 ORTHO05D009420 1.2e-31 140.2 151 55.6
Glyma.07G201000 Glycine max HOM05D007507 ORTHO05D009420 2.1e-31 139.4 148 52.0
Sabra11G0039300 Salix brachista HOM05D007507 ORTHO05D009420 2.1e-31 139.4 151 53.6
MD05G1310700 Malus domestica HOM05D007507 ORTHO05D009420 2.7e-31 139.0 146 55.5
Prupe.4G051900 Prunus persica HOM05D007507 ORTHO05D009420 1.0e-30 137.1 141 56.0
CiPaw.10G052300 Carya illinoinensis HOM05D007507 ORTHO05D009420 1.3e-30 136.7 149 54.4
Duzib235G0685 Durio zibethinus HOM05D007507 ORTHO05D009420 1.3e-30 136.7 146 53.4
RcHm_v2.0_Chr5g0009091 Rosa chinensis HOM05D007507 ORTHO05D009420 1.8e-30 136.3 149 54.4
Sabra04G0030100 Salix brachista HOM05D007507 ORTHO05D009420 1.8e-30 136.3 146 54.8
Glyma.13G175400 Glycine max HOM05D007507 ORTHO05D009420 2.3e-30 136.0 148 51.4
Glyma.13G236200 Glycine max HOM05D007507 ORTHO05D009420 2.3e-30 136.0 148 55.4
Lalb_Chr20g0121601 Lupinus albus HOM05D007507 ORTHO05D009420 5.1e-30 134.8 148 52.7
Manes.16G031300 Manihot esculenta HOM05D007507 ORTHO05D009420 1.1e-29 133.7 147 53.7
Nn1g04226 Nelumbo nucifera HOM05D007507 ORTHO05D009420 1.1e-29 133.7 135 59.3
Medtr4g088390 Medicago truncatula HOM05D007507 ORTHO05D009420 1.9e-29 132.9 145 55.9
Hma1.2p1_0558F.1_g178550 Hydrangea macrophylla HOM05D007507 ORTHO05D009420 3.3e-29 132.1 121 65.3
PGSC0003DMG400031763 Solanum tuberosum HOM05D007507 ORTHO05D009420 4.3e-29 131.7 146 55.5
MD10G1289800 Malus domestica HOM05D007507 ORTHO05D009420 5.6e-29 131.3 142 53.5
Sopen02g022610 Solanum pennellii HOM05D007507 ORTHO05D009420 5.6e-29 131.3 139 51.1
Ciclev10016932m.g Citrus clementina HOM05D007507 ORTHO05D009420 7.4e-29 131.0 142 54.2
Glyma.15G077500 Glycine max HOM05D007507 ORTHO05D009420 9.6e-29 130.6 148 54.7
Lj4g0010126 Lotus japonicus HOM05D007507 ORTHO05D009420 9.6e-29 130.6 151 49.0
FAN21G1585 Fragaria x ananassa HOM05D007507 ORTHO05D009420 2.8e-28 129.0 147 52.4
FvH4_3g08680 Fragaria vesca HOM05D007507 ORTHO05D009420 3.6e-28 128.6 149 51.0
Manes.17G048900 Manihot esculenta HOM05D007507 ORTHO05D009420 4.8e-28 128.3 138 58.0
Solyc02g077720.4 Solanum lycopersicum HOM05D007507 ORTHO05D009420 4.8e-28 128.3 146 52.1
VMungo0251G0526 Vigna mungo HOM05D007507 ORTHO05D009420 8.1e-28 127.5 142 50.7
Cc02_g13780 Coffea canephora HOM05D007507 ORTHO05D009420 1.4e-27 126.7 143 53.8
Phvul.002G232000 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 2.4e-27 125.9 136 51.5
FAN11G0818 Fragaria x ananassa HOM05D007507 ORTHO05D009420 4.0e-27 125.2 150 51.3
Psat7g115600 Pisum sativum HOM05D007507 ORTHO05D009420 5.3e-27 124.8 148 54.1
Phvul.006G182800 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 1.2e-26 123.6 128 56.2
TPR.G39426 Trifolium pratense HOM05D007507 ORTHO05D009420 2.6e-26 122.5 146 50.7
TPR.G19926 Trifolium pratense HOM05D007507 ORTHO05D009420 5.8e-26 121.3 151 51.0
Gohir.A05G159400 Gossypium hirsutum HOM05D007507 ORTHO05D009420 7.6e-26 120.9 149 47.7
Medtr2g014380 Medicago truncatula HOM05D007507 ORTHO05D009420 7.6e-26 120.9 149 49.0
arahy.Tifrunner.gnm1.ann1.UCBT0G Arachis hypogaea HOM05D007507 ORTHO05D009420 1.7e-25 119.8 153 50.3
CANSAT35G2017 Cannabis sativa HOM05D007507 ORTHO05D009420 1.7e-25 119.8 146 50.0
arahy.Tifrunner.gnm1.ann1.IERL18 Arachis hypogaea HOM05D007507 ORTHO05D009420 4.9e-25 118.2 153 50.3
Cpa.g.sc27.9 Carica papaya HOM05D007507 ORTHO05D009420 6.4e-25 117.9 149 47.7
HanXRQChr04g0113131 Helianthus annuus HOM05D007507 ORTHO05D009420 1.1e-24 117.1 144 49.3
Lsat_1_v5_gn_7_22681 Lactuca sativa HOM05D007507 ORTHO05D009420 1.9e-24 116.3 143 50.3
Nitab4.5_0002813g0060 Nicotiana tabacum HOM05D007507 ORTHO05D009420 5.5e-24 114.8 125 56.0
Gohir.D05G162100 Gossypium hirsutum HOM05D007507 ORTHO05D009420 7.1e-24 114.4 149 45.6
Gorai.009G167100 Gossypium raimondii HOM05D007507 ORTHO05D009420 9.3e-24 114.0 145 46.2
MBI07_g29118_MAGBIO Magnolia biondii HOM05D007507 ORTHO05D009420 1.6e-23 113.2 149 48.3
TWI38G1903 Tripterygium wilfordii HOM05D007507 ORTHO05D009420 1.6e-23 113.2 147 49.7
Gohir.A09G073500 Gossypium hirsutum HOM05D007507 ORTHO05D009420 2.1e-23 112.8 150 46.0
Gorai.010G158100 Gossypium raimondii HOM05D007507 ORTHO05D009420 2.1e-23 112.8 150 45.3
arahy.Tifrunner.gnm1.ann1.XNU6AG Arachis hypogaea HOM05D007507 ORTHO05D009420 2.7e-23 112.5 152 47.4
DCAR_004049 Daucus carota HOM05D007507 ORTHO05D009420 3.5e-23 112.1 136 50.0
Gohir.D06G135900 Gossypium hirsutum HOM05D007507 ORTHO05D009420 7.9e-23 110.9 150 45.3
Atru.chr10.1803 Acer truncatum HOM05D007507 ORTHO05D009420 1.8e-22 109.8 155 48.4
arahy.Tifrunner.gnm1.ann1.26E61A Arachis hypogaea HOM05D007507 ORTHO05D009420 1.8e-22 109.8 142 47.9
MSTRG.14710 Avicennia marina HOM05D007507 ORTHO05D009420 2.3e-22 109.4 140 45.0
Gohir.D09G073200 Gossypium hirsutum HOM05D007507 ORTHO05D009420 2.3e-22 109.4 150 46.0
Gorai.006G088200 Gossypium raimondii HOM05D007507 ORTHO05D009420 2.3e-22 109.4 150 46.0
Nitab4.5_0007893g0030 Nicotiana tabacum HOM05D007507 ORTHO05D009420 6.7e-22 107.8 125 53.6
Eucgr.E03247 Eucalyptus grandis HOM05D007507 ORTHO05D009420 4.3e-21 105.1 152 47.4
VMungo0540G0304 Vigna mungo HOM05D007507 ORTHO05D009420 9.6e-21 104.0 143 49.0
PGR042G2392 Punica granatum HOM05D007507 ORTHO05D009420 3.7e-20 102.1 145 45.5
ClCG01G023220 Citrullus lanatus HOM05D007507 ORTHO05D009420 8.1e-20 100.9 144 42.4
Atru.chr10.1804 Acer truncatum HOM05D007507 ORTHO05D009420 4.0e-19 98.6 152 46.1
PSO675G6999 Papaver somniferum HOM05D007507 ORTHO05D009420 5.3e-19 98.2 141 43.3
CsaV3_6G050370 Cucumis sativus L. HOM05D007507 ORTHO05D009420 9.0e-19 97.4 148 41.2
Migut.H01473 Erythranthe guttata HOM05D007507 ORTHO05D009420 9.0e-19 97.4 154 44.2
DCAR_008007 Daucus carota HOM05D007507 ORTHO05D009420 2.0e-18 96.3 135 46.7
ECA236G3296 Erigeron canadensis HOM05D007507 ORTHO05D009420 2.6e-18 95.9 93 58.1
Oeu015676.1 Olea europaea HOM05D007507 ORTHO05D009420 5.8e-18 94.7 103 56.3
Haze_06387 Corylus avellana HOM05D007507 ORTHO05D009420 1.0e-17 94.0 140 42.1
Oeu064800.1 Olea europaea HOM05D007507 ORTHO05D009420 1.7e-17 93.2 126 48.4
Oeu027697.1 Olea europaea HOM05D007507 ORTHO05D009420 2.2e-17 92.8 98 53.1
Aqoxy4G00641 Aquilegia oxysepala HOM05D007507 ORTHO05D009420 1.6e-15 86.7 86 61.6
Sed0011593 Sechium edule HOM05D007507 ORTHO05D009420 2.7e-15 85.9 127 43.3
PSO541G3558 Papaver somniferum HOM05D007507 ORTHO05D009420 1.0e-14 84.0 101 49.5
Migut.M01111 Erythranthe guttata HOM05D007507 ORTHO05D009420 1.3e-14 83.6 136 41.9
Rhsim13G0180100 Rhododendron simsii HOM05D007507 ORTHO05D009420 8.7e-14 80.9 87 52.9
MELO3C007264.2 Cucumis melo HOM05D007507 ORTHO05D009420 1.6e-12 76.6 100 47.0
SalBow8G4682 Salvia bowleyana HOM05D007507 ORTHO05D009420 1.1e-11 73.9 132 40.2
SEGI_17757 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 2.4e-11 72.8 84 51.2
Peaxi162Scf00926g00516 Petunia axillaris HOM05D007507 ORTHO05D009420 3.1e-11 72.4 144 38.2
SEGI_36970 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 1.3e-09 67.0 101 44.6
Psat1g203160 Pisum sativum HOM05D007507 ORTHO05D009420 1.1e-08 63.9 100 43.0
SalBow8G0489 Salvia bowleyana HOM05D007507 ORTHO05D009420 1.6e-07 60.1 72 50.0
SEGI_35508 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 2.1e-07 59.7 82 42.7
SalBow8G0028 Salvia bowleyana HOM05D002091 ORTHO05D002140 1.3e-06 57.0 127 37.8
EL10Ac8g20432 Beta vulgaris HOM05D007507 ORTHO05D009420 1.8e-06 56.6 82 41.5


User provided reference genes

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