Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40591 Davidia involucrata HOM05D004921 ORTHO05D006008 3.4e-90 335.1 184 100.0
Dinv04895 Davidia involucrata HOM05D004921 ORTHO05D006008 3.9e-46 188.7 114 94.7
Dinv32118 Davidia involucrata HOM05D004921 ORTHO05D006008 1.3e-44 183.7 114 94.7
Dinv21950 Davidia involucrata HOM05D004921 ORTHO05D006008 9.3e-40 167.5 140 77.1
Cc07_g15680 Coffea canephora HOM05D004921 ORTHO05D006008 1.2e-31 140.6 140 62.1
MD01G1023900 Malus domestica HOM05D004921 ORTHO05D006008 7.9e-31 137.9 140 60.0
RcHm_v2.0_Chr2g0115541 Rosa chinensis HOM05D004921 ORTHO05D006008 7.9e-31 137.9 140 61.4
CiPaw.03G138100 Carya illinoinensis HOM05D004921 ORTHO05D006008 1.3e-30 137.1 140 60.7
ClCG01G019030 Citrullus lanatus HOM05D004921 ORTHO05D006008 1.3e-30 137.1 140 60.7
Rhsim10G0156300 Rhododendron simsii HOM05D004921 ORTHO05D006008 1.8e-30 136.7 139 60.4
Prupe.6G178900 Prunus persica HOM05D004921 ORTHO05D006008 2.3e-30 136.3 140 60.0
Nitab4.5_0000518g0040 Nicotiana tabacum HOM05D004921 ORTHO05D006008 5.1e-30 135.2 140 59.3
Peaxi162Scf00204g00620 Petunia axillaris HOM05D004921 ORTHO05D006008 8.7e-30 134.4 140 59.3
Sed0006076 Sechium edule HOM05D004921 ORTHO05D006008 1.1e-29 134.0 140 58.6
Actinidia36610 Actinidia chinensis HOM05D004921 ORTHO05D006008 1.5e-29 133.7 135 64.4
Thecc.01G107800 Theobroma cacao HOM05D004921 ORTHO05D006008 1.5e-29 133.7 140 58.6
Sabra05G0065800 Salix brachista HOM05D004921 ORTHO05D006008 2.5e-29 132.9 148 54.7
Migut.H02393 Erythranthe guttata HOM05D004921 ORTHO05D006008 4.3e-29 132.1 140 60.0
Nn5g28998 Nelumbo nucifera HOM05D004921 ORTHO05D006008 4.3e-29 132.1 140 59.3
Duzib147G0642 Durio zibethinus HOM05D004921 ORTHO05D006008 1.3e-28 130.6 140 57.1
Lsat_1_v5_gn_5_40701 Lactuca sativa HOM05D004921 ORTHO05D006008 1.3e-28 130.6 134 58.2
Gohir.D11G225200 Gossypium hirsutum HOM05D004921 ORTHO05D006008 4.8e-28 128.6 140 56.4
Manes.12G138700 Manihot esculenta HOM05D004921 ORTHO05D006008 6.3e-28 128.3 139 56.8
TAR381G0204 Trochodendron aralioides HOM05D004921 ORTHO05D006008 8.2e-28 127.9 138 60.1
MELO3C007782.2 Cucumis melo HOM05D004921 ORTHO05D006008 1.1e-27 127.5 140 58.6
MD15G1329400 Malus domestica HOM05D004921 ORTHO05D006008 1.8e-27 126.7 140 57.9
vmacro12934 Vaccinium macrocarpon HOM05D004921 ORTHO05D006008 1.8e-27 126.7 130 62.3
Eucgr.I00377 Eucalyptus grandis HOM05D004921 ORTHO05D006008 3.1e-27 125.9 139 57.6
Gohir.A11G198900 Gossypium hirsutum HOM05D004921 ORTHO05D006008 4.1e-27 125.6 140 55.7
Gorai.007G242500 Gossypium raimondii HOM05D004921 ORTHO05D006008 4.1e-27 125.6 140 55.7
MSTRG.23325 Avicennia marina HOM05D004921 ORTHO05D006008 5.3e-27 125.2 139 58.3
TAR381G1578 Trochodendron aralioides HOM05D004921 ORTHO05D006008 5.3e-27 125.2 138 59.4
Gohir.A12G091122 Gossypium hirsutum HOM05D004921 ORTHO05D006008 9.0e-27 124.4 140 55.7
Nitab4.5_0001095g0090 Nicotiana tabacum HOM05D004921 ORTHO05D006008 1.5e-26 123.6 140 58.6
Sopen04g024290 Solanum pennellii HOM05D004921 ORTHO05D006008 1.5e-26 123.6 140 57.1
TWI53G0980 Tripterygium wilfordii HOM05D004921 ORTHO05D006008 2.0e-26 123.2 140 57.1
CsaV3_6G045720 Cucumis sativus L. HOM05D004921 ORTHO05D006008 4.5e-26 122.1 140 56.4
Duzib187G0704 Durio zibethinus HOM05D004921 ORTHO05D006008 4.5e-26 122.1 136 58.1
Gohir.D12G094600 Gossypium hirsutum HOM05D004921 ORTHO05D006008 7.7e-26 121.3 140 54.3
Gorai.008G103200 Gossypium raimondii HOM05D004921 ORTHO05D006008 7.7e-26 121.3 140 54.3
PSO133G0077 Papaver somniferum HOM05D004921 ORTHO05D006008 7.7e-26 121.3 140 55.0
Aqoxy6G00539 Aquilegia oxysepala HOM05D004921 ORTHO05D006008 1.0e-25 120.9 140 55.0
AUR62002041 Chenopodium quinoa HOM05D004921 ORTHO05D006008 1.0e-25 120.9 138 57.2
SGA_v2.0_scaffold51G18730 Striga asiatica HOM05D004921 ORTHO05D006008 1.0e-25 120.9 140 55.0
ATR0661G561 Amborella trichopoda HOM05D004921 ORTHO05D006008 1.3e-25 120.6 136 56.6
AUR62003756 Chenopodium quinoa HOM05D004921 ORTHO05D006008 1.3e-25 120.6 138 56.5
EL10Ac6g15063 Beta vulgaris HOM05D004921 ORTHO05D006008 1.7e-25 120.2 140 53.6
PSO541G2636 Papaver somniferum HOM05D004921 ORTHO05D006008 1.7e-25 120.2 140 55.0
Hma1.2p1_0070F.1_g037670 Hydrangea macrophylla HOM05D004921 ORTHO05D006008 2.9e-25 119.4 140 57.9
Potri.005G080200 Populus trichocarpa HOM05D004921 ORTHO05D006008 6.5e-25 118.2 140 53.6
Potri.007G087100 Populus trichocarpa HOM05D004921 ORTHO05D006008 6.5e-25 118.2 140 52.1
THA.LOC104807708 Tarenaya hassleriana HOM05D004921 ORTHO05D006008 6.5e-25 118.2 140 53.6
Atru.chr4.263 Acer truncatum HOM05D004921 ORTHO05D006008 1.4e-24 117.1 140 55.0
MSTRG.2547 Avicennia marina HOM05D004921 ORTHO05D006008 1.4e-24 117.1 138 58.7
Hma1.2p1_0070F.1_g037680 Hydrangea macrophylla HOM05D004921 ORTHO05D006008 5.5e-24 115.2 140 56.4
Lj4A880G51 Lonicera japonica HOM05D004921 ORTHO05D006008 2.7e-23 112.8 136 58.8
CARHR247030 Cardamine hirsuta HOM05D004921 ORTHO05D006008 6.1e-23 111.7 140 50.0
COL.COLO4_11048 Corchorus olitorius HOM05D004921 ORTHO05D006008 1.0e-22 110.9 140 53.6
unitig_0.g2479 Utricularia gibba HOM05D004921 ORTHO05D006008 1.0e-22 110.9 136 52.2
Carub.0007s0157 Capsella rubella HOM05D004921 ORTHO05D006008 2.3e-22 109.8 140 49.3
AT4G39690 Arabidopsis thaliana HOM05D004921 ORTHO05D006008 3.0e-22 109.4 140 49.3
PGR004G1500 Punica granatum HOM05D004921 ORTHO05D006008 8.8e-22 107.8 140 51.4
TPR.G2186 Trifolium pratense HOM05D004921 ORTHO05D006008 1.1e-21 107.5 134 50.7
BcaB03g12266 Brassica carinata HOM05D004921 ORTHO05D006008 4.3e-21 105.5 140 46.4
BcaC01g00311 Brassica carinata HOM05D004921 ORTHO05D006008 1.3e-20 104.0 140 45.7
A08p23440 Brassica napus HOM05D004921 ORTHO05D006008 1.3e-20 104.0 140 45.7
C03p78130 Brassica napus HOM05D004921 ORTHO05D006008 1.3e-20 104.0 140 45.7
BolC3t20076H Brassica oleracea HOM05D004921 ORTHO05D006008 1.3e-20 104.0 140 45.7
BraA08t34298Z Brassica rapa HOM05D004921 ORTHO05D006008 1.3e-20 104.0 140 45.7
Sp7g36200 Schrenkiella parvula HOM05D004921 ORTHO05D006008 1.3e-20 104.0 140 46.4
Aa31LG6G15580 Aethionema arabicum HOM05D004921 ORTHO05D006008 8.2e-20 101.3 131 48.1
QL06p050536 Quercus lobata HOM05D004921 ORTHO05D006008 8.2e-20 101.3 140 48.6
Ciclev10025222m.g Citrus clementina HOM05D004921 ORTHO05D006008 1.2e-18 97.4 140 49.3
HanXRQChr02g0041141 Helianthus annuus HOM05D004921 ORTHO05D006008 5.9e-18 95.1 139 48.9
CDE04G0927 Ceratophyllum demersum HOM05D004921 ORTHO05D006008 1.7e-17 93.6 132 50.0
Thhalv10024641m.g Eutrema salsugineum HOM05D004921 ORTHO05D006008 2.2e-17 93.2 140 43.6
Haze_24997 Corylus avellana HOM05D004921 ORTHO05D006008 2.9e-17 92.8 159 44.7
Lj4g0017071 Lotus japonicus HOM05D004921 ORTHO05D006008 2.9e-17 92.8 140 47.1
GSVIVG01022188001 Vitis vinifera HOM05D004921 ORTHO05D006008 1.1e-16 90.9 140 48.6
HPP92_016473 Vanilla planifolia HOM05D004921 ORTHO05D006008 3.2e-16 89.4 132 46.2
HPP92_027138 Vanilla planifolia HOM05D004921 ORTHO05D006008 3.2e-16 89.4 132 46.2
Zm00001eb431730 Zea mays HOM05D004921 ORTHO05D006008 3.2e-16 89.4 132 45.5
Ah.03g142660 Amaranthus hybridus HOM05D004921 ORTHO05D006008 4.2e-16 89.0 140 47.9
Zm00001eb069160 Zea mays HOM05D004921 ORTHO05D006008 4.2e-16 89.0 134 45.5
Lalb_Chr07g0184941 Lupinus albus HOM05D004921 ORTHO05D006008 9.4e-16 87.8 140 42.9
Hund13647 Selenicereus undatus HOM05D004921 ORTHO05D006008 9.4e-16 87.8 140 47.1
Lalb_Chr13g0296081 Lupinus albus HOM05D004921 ORTHO05D006008 2.7e-15 86.3 140 44.3
Sc03g0002320 Simmondsia chinensis HOM05D004921 ORTHO05D006008 3.6e-15 85.9 138 47.8
Sabra07G0072000 Salix brachista HOM05D004921 ORTHO05D006008 6.1e-15 85.1 119 46.2
SEGI_00052 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 1.8e-14 83.6 132 44.7
SEGI_07937 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 1.8e-14 83.6 132 44.7
Glyma.08G139400 Glycine max HOM05D004921 ORTHO05D006008 1.1e-13 80.9 100 50.0
Glyma.05G181700 Glycine max HOM05D004921 ORTHO05D006008 2.0e-13 80.1 140 42.9
Phvul.002G262700 Phaseolus vulgaris HOM05D004921 ORTHO05D006008 2.0e-13 80.1 136 39.7
ECA246G4277 Erigeron canadensis HOM05D004921 ORTHO05D006008 5.7e-13 78.6 143 44.8
MBI05_g00773_MAGBIO Magnolia biondii HOM05D004921 ORTHO05D006008 7.4e-13 78.2 140 42.1
DCAR_001020 Daucus carota HOM05D004921 ORTHO05D006008 1.3e-12 77.4 138 44.2
arahy.Tifrunner.gnm1.ann1.P05418 Arachis hypogaea HOM05D004921 ORTHO05D006008 2.2e-12 76.6 136 41.9
arahy.Tifrunner.gnm1.ann1.WRB6NJ Arachis hypogaea HOM05D004921 ORTHO05D006008 2.2e-12 76.6 136 38.2
FAN26G3332 Fragaria x ananassa HOM05D004921 ORTHO05D006008 2.2e-12 76.6 140 41.4
FAN26G3387 Fragaria x ananassa HOM05D004921 ORTHO05D006008 2.2e-12 76.6 140 41.4
CANSAT01G2911 Cannabis sativa HOM05D004921 ORTHO05D006008 3.7e-12 75.9 140 44.3
FAN28G0310 Fragaria x ananassa HOM05D004921 ORTHO05D006008 3.7e-12 75.9 140 41.4
FvH4_1g21670 Fragaria vesca HOM05D004921 ORTHO05D006008 6.3e-12 75.1 140 42.1
FAN23G2445 Fragaria x ananassa HOM05D004921 ORTHO05D006008 6.3e-12 75.1 140 42.1
CSS0005403 Camellia sinensis var. sinensis HOM05D004921 ORTHO05D006008 1.1e-11 74.3 42 88.1
AL7G11890 Arabidopsis lyrata HOM05D004921 ORTHO05D006008 3.1e-11 72.8 138 40.6
Psat7g053360 Pisum sativum HOM05D004921 ORTHO05D006008 3.1e-11 72.8 134 41.0
VMungo0251G2130 Vigna mungo HOM05D004921 ORTHO05D006008 5.3e-11 72.0 136 41.2
FAN19G2080 Fragaria x ananassa HOM05D004921 ORTHO05D006008 9.1e-11 71.2 140 41.4
Dinv41328 Davidia involucrata HOM05D004921 ORTHO05D182043 5.9e-10 68.6 48 72.9
COL.COLO4_35617 Corchorus olitorius HOM05D004921 ORTHO05D006008 1.0e-09 67.8 43 76.7
Cpa.g.sc82.54 Carica papaya HOM05D004921 ORTHO05D006008 1.3e-09 67.4 63 57.1
Medtr8g091480 Medicago truncatula HOM05D004921 ORTHO05D006008 1.5e-08 63.9 140 34.3
Dinv17341 Davidia involucrata HOM05D000553 ORTHO05D000460 1.2e-07 60.8 76 50.0
CDE06G0766 Ceratophyllum demersum HOM05D004921 ORTHO05D006008 2.7e-07 59.7 132 40.2
MBI14_g14180_MAGBIO Magnolia biondii HOM05D000221 ORTHO05D006008 4.7e-07 58.9 49 53.1
MBI14_g34262_MAGBIO Magnolia biondii HOM05D000221 ORTHO05D006008 8.0e-07 58.2 53 54.7


User provided reference genes

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