Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 7.7e-53 210.3 113 100.0
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 1.7e-44 182.6 108 89.8
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 1.4e-41 172.9 108 88.0
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 2.3e-41 172.2 113 82.3
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 4.0e-41 171.4 111 82.0
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 5.7e-40 167.5 113 81.4
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 1.8e-38 162.5 113 78.8
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 1.5e-35 152.9 111 73.0
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 1.9e-35 152.5 103 77.7
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 2.5e-35 152.1 103 76.7
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 3.2e-35 151.8 110 71.8
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 7.2e-35 150.6 109 77.1
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 2.8e-34 148.7 103 77.7
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 6.1e-34 147.5 114 71.1
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 1.4e-33 146.4 113 70.8
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 5.2e-33 144.4 105 75.2
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 6.8e-33 144.1 111 71.2
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 1.2e-32 143.3 111 72.1
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 1.2e-32 143.3 107 72.0
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 2.0e-32 142.5 105 72.4
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 3.4e-32 141.7 98 75.5
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 4.4e-32 141.4 111 70.3
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 5.7e-32 141.0 109 72.5
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 7.5e-32 140.6 109 72.5
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 1.3e-31 139.8 102 76.5
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 1.3e-31 139.8 112 71.4
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.7e-31 139.4 105 71.4
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 2.8e-31 138.7 102 72.5
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 2.8e-31 138.7 103 74.8
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 3.7e-31 138.3 97 73.2
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 3.7e-31 138.3 97 73.2
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 3.7e-31 138.3 97 73.2
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 4.9e-31 137.9 103 76.7
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 4.9e-31 137.9 106 76.4
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 6.3e-31 137.5 103 71.8
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 1.4e-30 136.3 102 71.6
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 1.4e-30 136.3 109 69.7
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 2.4e-30 135.6 103 70.9
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 3.1e-30 135.2 103 69.9
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 3.1e-30 135.2 104 69.2
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 4.1e-30 134.8 103 69.9
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 5.4e-30 134.4 113 68.1
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 5.4e-30 134.4 103 68.9
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 7.0e-30 134.0 113 65.5
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 7.0e-30 134.0 113 65.5
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 9.2e-30 133.7 103 67.0
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 9.2e-30 133.7 103 70.9
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 1.6e-29 132.9 108 68.5
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 2.0e-29 132.5 97 75.3
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 2.0e-29 132.5 110 67.3
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 3.5e-29 131.7 102 74.5
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 3.5e-29 131.7 106 69.8
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 7.8e-29 130.6 103 71.8
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 1.0e-28 130.2 109 67.0
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 1.3e-28 129.8 109 66.1
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 1.3e-28 129.8 100 74.0
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 1.3e-28 129.8 100 75.0
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 1.7e-28 129.4 102 70.6
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 5.0e-28 127.9 103 68.0
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 8.6e-28 127.1 109 64.2
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 1.5e-27 126.3 109 64.2
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 1.9e-27 125.9 103 68.0
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 3.3e-27 125.2 90 78.9
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 4.3e-27 124.8 101 72.3
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 4.3e-27 124.8 103 67.0
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 1.6e-26 122.9 102 65.7
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 2.1e-26 122.5 94 69.1
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 8.0e-26 120.6 95 65.3
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 1.8e-25 119.4 93 66.7
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 4.0e-25 118.2 94 70.2
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 5.2e-25 117.9 83 78.3
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 8.9e-25 117.1 93 65.6
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 1.2e-24 116.7 102 64.7
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 1.5e-24 116.3 94 64.9
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 1.5e-24 116.3 103 59.2
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 4.4e-24 114.8 103 59.2
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 4.4e-24 114.8 97 66.0
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 2.9e-23 112.1 94 61.7
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 2.9e-23 112.1 154 46.8
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 3.7e-23 111.7 101 60.4
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 4.9e-23 111.3 101 60.4
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 4.9e-23 111.3 101 60.4
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 4.9e-23 111.3 101 60.4
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 1.8e-22 109.4 82 73.2
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 4.1e-22 108.2 102 58.8
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 5.4e-22 107.8 100 59.0
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 7.0e-22 107.5 103 59.2
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 9.2e-22 107.1 83 73.5
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 2.0e-21 105.9 79 72.2
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 3.5e-21 105.1 83 71.1
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 4.6e-21 104.8 119 52.9
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 3.0e-20 102.1 120 50.8
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 3.9e-20 101.7 101 57.4
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 9.5e-19 97.1 101 51.5
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 6.2e-18 94.4 102 52.9
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 3.1e-17 92.0 60 81.7
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 2.0e-16 89.4 69 72.5
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 7.5e-16 87.4 106 50.9
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 2.9e-15 85.5 73 60.3
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 9.2e-14 80.5 101 47.5
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 1.3e-12 76.6 101 44.6
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 1.2e-10 70.1 118 39.0
CDE12G0235 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 3.1e-09 65.5 101 43.6
SEGI_39568 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 3.2e-06 55.5 48 60.4


User provided reference genes

Program Settings