Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40521 Davidia involucrata HOM05D007183 ORTHO05D008829 3.3e-161 571.6 280 100.0
Hma1.2p1_0191F.1_g083390 Hydrangea macrophylla HOM05D007183 ORTHO05D008829 3.7e-104 382.1 343 58.3
TWI63G1715 Tripterygium wilfordii HOM05D007183 ORTHO05D008829 3.9e-98 362.1 374 51.1
TWI38G0385 Tripterygium wilfordii HOM05D007183 ORTHO05D008829 2.2e-96 356.3 376 50.8
Potri.011G046100 Populus trichocarpa HOM05D007183 ORTHO05D008829 7.7e-94 347.8 377 49.6
Potri.004G037400 Populus trichocarpa HOM05D007183 ORTHO05D008829 5.5e-92 341.7 377 49.1
Ciclev10017704m.g Citrus clementina HOM05D007183 ORTHO05D008829 3.6e-91 339.0 372 48.7
Prupe.4G040300 Prunus persica HOM05D007183 ORTHO05D008829 5.1e-90 335.1 377 48.3
MD05G1322500 Malus domestica HOM05D007183 ORTHO05D008829 3.3e-89 332.4 377 49.9
MD10G1300400 Malus domestica HOM05D007183 ORTHO05D008829 3.3e-89 332.4 377 49.6
TAR629G0430 Trochodendron aralioides HOM05D007183 ORTHO05D008829 7.4e-89 331.3 376 49.2
Manes.13G149600 Manihot esculenta HOM05D007183 ORTHO05D008829 1.3e-88 330.5 355 49.9
PGR004G0270 Punica granatum HOM05D007183 ORTHO05D008829 6.9e-87 324.7 377 48.0
Thecc.06G194600 Theobroma cacao HOM05D007183 ORTHO05D008829 6.5e-85 318.2 377 46.7
Manes.16G023400 Manihot esculenta HOM05D007183 ORTHO05D008829 1.1e-84 317.4 377 47.2
Dinv03840 Davidia involucrata HOM05D007183 ORTHO05D008829 1.4e-84 317.0 355 48.2
Aqoxy1G02644 Aquilegia oxysepala HOM05D007183 ORTHO05D008829 4.2e-84 315.5 379 46.4
Duzib235G0436 Durio zibethinus HOM05D007183 ORTHO05D008829 4.2e-84 315.5 376 46.0
Gohir.A05G163250 Gossypium hirsutum HOM05D007183 ORTHO05D008829 4.2e-84 315.5 326 50.0
Glyma.13G243900 Glycine max HOM05D007183 ORTHO05D008829 3.6e-83 312.4 380 46.3
FvH4_3g27971 Fragaria vesca HOM05D007183 ORTHO05D008829 1.0e-82 310.8 378 45.5
GSVIVG01006947001 Vitis vinifera HOM05D007183 ORTHO05D008829 3.0e-82 309.3 377 46.4
RcHm_v2.0_Chr5g0007471 Rosa chinensis HOM05D007183 ORTHO05D008829 2.6e-81 306.2 378 45.2
Nitab4.5_0001820g0090 Nicotiana tabacum HOM05D007183 ORTHO05D008829 3.3e-81 305.8 341 48.7
Peaxi162Scf00007g00283 Petunia axillaris HOM05D007183 ORTHO05D008829 9.7e-81 304.3 340 47.6
Ca_00299_v3 Cicer arietinum L. HOM05D007183 ORTHO05D008829 2.8e-80 302.8 376 45.2
Medtr2g012790 Medicago truncatula HOM05D007183 ORTHO05D008829 3.7e-80 302.4 376 44.9
GSVIVG01030561001 Vitis vinifera HOM05D007183 ORTHO05D008829 3.7e-80 302.4 349 47.6
Psat1g207000 Pisum sativum HOM05D007183 ORTHO05D008829 2.4e-79 299.7 375 44.5
Nitab4.5_0002370g0040 Nicotiana tabacum HOM05D007183 ORTHO05D008829 4.1e-79 298.9 343 47.5
Phvul.006G189500 Phaseolus vulgaris HOM05D007183 ORTHO05D008829 4.1e-79 298.9 377 44.8
Gorai.009G171300 Gossypium raimondii HOM05D007183 ORTHO05D008829 5.3e-79 298.5 379 44.3
Gohir.D05G166200 Gossypium hirsutum HOM05D007183 ORTHO05D008829 2.0e-78 296.6 379 43.8
Lj6g0020427 Lotus japonicus HOM05D007183 ORTHO05D008829 2.6e-78 296.2 376 45.2
Thecc.02G174600 Theobroma cacao HOM05D007183 ORTHO05D008829 5.9e-78 295.0 377 45.4
PGR042G2243 Punica granatum HOM05D007183 ORTHO05D008829 7.7e-78 294.7 379 45.1
PGSC0003DMG400045796 Solanum tuberosum HOM05D007183 ORTHO05D008829 1.0e-77 294.3 374 43.9
VMungo0540G0277 Vigna mungo HOM05D007183 ORTHO05D008829 1.0e-77 294.3 377 43.8
Sopen02g023560 Solanum pennellii HOM05D007183 ORTHO05D008829 1.7e-77 293.5 374 44.1
Nitab4.5_0007319g0020 Nicotiana tabacum HOM05D007183 ORTHO05D008829 6.5e-77 291.6 374 44.7
Eucgr.D00687 Eucalyptus grandis HOM05D007183 ORTHO05D008829 1.1e-76 290.8 394 42.1
Nitab4.5_0001871g0020 Nicotiana tabacum HOM05D007183 ORTHO05D008829 5.5e-76 288.5 378 43.9
Cc05_g06690 Coffea canephora HOM05D007183 ORTHO05D008829 9.4e-76 287.7 353 43.9
Haze_06540 Corylus avellana HOM05D007183 ORTHO05D008829 1.4e-74 283.9 369 44.2
Oeu038241.1 Olea europaea HOM05D007183 ORTHO05D008829 5.2e-74 282.0 376 42.8
Solyc02g078710.1 Solanum lycopersicum HOM05D007183 ORTHO05D008829 6.7e-74 281.6 374 42.8
Gohir.D02G181900 Gossypium hirsutum HOM05D007183 ORTHO05D008829 1.1e-73 280.8 356 44.7
Gorai.005G204400 Gossypium raimondii HOM05D007183 ORTHO05D008829 1.1e-73 280.8 356 44.7
TPR.G36730 Trifolium pratense HOM05D007183 ORTHO05D008829 1.5e-73 280.4 386 44.0
Cfa000386 Carpinus fangiana HOM05D007183 ORTHO05D008829 2.0e-73 280.0 339 44.0
Gohir.A10G022800 Gossypium hirsutum HOM05D007183 ORTHO05D008829 4.4e-73 278.9 371 42.6
Gohir.D10G023600 Gossypium hirsutum HOM05D007183 ORTHO05D008829 2.2e-72 276.6 371 42.6
Gorai.011G024700 Gossypium raimondii HOM05D007183 ORTHO05D008829 6.3e-72 275.0 371 42.6
arahy.Tifrunner.gnm1.ann1.CVYZ1N Arachis hypogaea HOM05D007183 ORTHO05D008829 8.2e-72 274.6 376 42.3
COL.COLO4_35412 Corchorus olitorius HOM05D007183 ORTHO05D008829 1.1e-71 274.2 335 45.7
arahy.Tifrunner.gnm1.ann1.B6W742 Arachis hypogaea HOM05D007183 ORTHO05D008829 7.0e-71 271.6 353 43.3
arahy.Tifrunner.gnm1.ann1.R2A86L Arachis hypogaea HOM05D007183 ORTHO05D008829 7.0e-71 271.6 376 42.3
Actinidia09880 Actinidia chinensis HOM05D007183 ORTHO05D008829 5.9e-70 268.5 346 42.2
Solyc07g054570.1 Solanum lycopersicum HOM05D007183 ORTHO05D008829 1.3e-69 267.3 384 41.4
TPR.G36795 Trifolium pratense HOM05D007183 ORTHO05D008829 5.5e-68 261.9 377 41.1
CiPaw.09G053400 Carya illinoinensis HOM05D007183 ORTHO05D008829 6.1e-67 258.5 344 43.3
Eucgr.E03363 Eucalyptus grandis HOM05D007183 ORTHO05D008829 8.0e-67 258.1 369 41.7
ATR0693G416 Amborella trichopoda HOM05D007183 ORTHO05D008829 1.2e-65 254.2 359 40.4
Haze_13111 Corylus avellana HOM05D007183 ORTHO05D008829 4.4e-65 252.3 346 41.0
PSO675G2267 Papaver somniferum HOM05D007183 ORTHO05D008829 4.8e-64 248.8 375 39.7
Solyc10g008530.1 Solanum lycopersicum HOM05D007183 ORTHO05D008829 4.1e-63 245.7 343 41.1
arahy.Tifrunner.gnm1.ann1.EK8XNT Arachis hypogaea HOM05D007183 ORTHO05D008829 1.0e-61 241.1 338 41.1
PSO541G4014 Papaver somniferum HOM05D007183 ORTHO05D008829 1.7e-61 240.4 375 38.9
Migut.H01046 Erythranthe guttata HOM05D007183 ORTHO05D008829 5.0e-61 238.8 345 39.1
ClCG02G001190 Citrullus lanatus HOM05D007183 ORTHO05D008829 7.2e-60 235.0 366 38.3
CsaV3_7G004260 Cucumis sativus L. HOM05D007183 ORTHO05D008829 1.2e-59 234.2 370 38.4
Migut.M01164 Erythranthe guttata HOM05D007183 ORTHO05D008829 1.6e-59 233.8 378 38.4
Glyma.15G069800 Glycine max HOM05D007183 ORTHO05D008829 6.1e-59 231.9 237 57.4
MBI02_g37921_MAGBIO Magnolia biondii HOM05D007183 ORTHO05D008829 4.4e-57 225.7 293 42.0
CANSAT35G0251 Cannabis sativa HOM05D007183 ORTHO05D008829 1.3e-56 224.2 381 37.5
HanXRQChr05g0140521 Helianthus annuus HOM05D007183 ORTHO05D008829 2.2e-56 223.4 355 36.9
Actinidia39436 Actinidia chinensis HOM05D007183 ORTHO05D008829 3.7e-56 222.6 372 39.5
Gohir.A03G158800 Gossypium hirsutum HOM05D007183 ORTHO05D008829 6.3e-56 221.9 312 41.0
Sed0026806 Sechium edule HOM05D007183 ORTHO05D008829 6.3e-56 221.9 375 37.6
Cpa.g.sc34.121 Carica papaya HOM05D007183 ORTHO05D008829 4.1e-55 219.2 149 68.5
Lj8A115T58 Lonicera japonica HOM05D007183 ORTHO05D008829 9.1e-55 218.0 230 50.9
HanXRQChr16g0517841 Helianthus annuus HOM05D007183 ORTHO05D008829 1.6e-54 217.2 351 35.9
Sed0021459 Sechium edule HOM05D007183 ORTHO05D008829 1.6e-54 217.2 352 37.2
COL.COLO4_31536 Corchorus olitorius HOM05D007183 ORTHO05D008829 2.7e-54 216.5 306 41.2
GSVIVG01006336001 Vitis vinifera HOM05D007183 ORTHO05D008829 4.5e-54 215.7 303 42.9
Eucgr.L02005 Eucalyptus grandis HOM05D007183 ORTHO05D008829 5.0e-53 212.2 284 43.0
CAN.G996.14 Capsicum annuum HOM05D007183 ORTHO05D008829 2.1e-51 206.8 303 40.3
Lj2P283T62 Lonicera japonica HOM05D007183 ORTHO05D008829 6.1e-51 205.3 146 68.5
Solyc08g068470.1 Solanum lycopersicum HOM05D007183 ORTHO05D008829 2.6e-49 199.9 151 64.2
DCAR_021231 Daucus carota HOM05D007183 ORTHO05D008829 3.7e-48 196.1 145 60.7
PGSC0003DMG400042494 Solanum tuberosum HOM05D007183 ORTHO05D008829 6.3e-48 195.3 304 38.2
Zm00001eb258250 Zea mays HOM05D007183 ORTHO05D008829 2.4e-47 193.4 371 35.0
ECA234G1429 Erigeron canadensis HOM05D007183 ORTHO05D000476 3.5e-46 189.5 353 34.8
SEGI_07341 Sequoiadendron giganteum HOM05D007183 ORTHO05D008829 2.5e-44 183.3 338 32.0
MELO3C018752.2 Cucumis melo HOM05D007183 ORTHO05D008829 6.8e-42 175.3 144 59.7
Eucgr.D00692 Eucalyptus grandis HOM05D007183 ORTHO05D008829 3.4e-41 172.9 304 35.9
CAN.G168.28 Capsicum annuum HOM05D007183 ORTHO05D008829 1.6e-35 154.1 261 35.6
Peaxi162Scf00812g00041 Petunia axillaris HOM05D007183 ORTHO05D008829 9.8e-33 144.8 150 50.0
Actinidia01436 Actinidia chinensis HOM05D007183 ORTHO05D008829 1.4e-31 141.0 128 57.0
Cc00_g11490 Coffea canephora HOM05D007183 ORTHO05D008829 5.1e-29 132.5 268 36.6
AagrBONN_evm.TU.Sc2ySwM_117.2587 Anthoceros agrestis HOM05D006800 ORTHO05D008478 3.3e-28 129.8 322 30.1
AagrBONN_evm.TU.Sc2ySwM_117.3060 Anthoceros agrestis HOM05D007183 ORTHO05D008829 6.8e-26 122.1 346 26.6
Peaxi162Scf00608g00919 Petunia axillaris HOM05D007183 ORTHO05D008829 4.4e-25 119.4 144 43.1
SMO358G0266 Selaginella moellendorffii HOM05D007183 ORTHO05D008829 5.4e-23 112.5 345 24.6
Sabra19G0114400 Salix brachista HOM05D007183 ORTHO05D008829 1.3e-16 91.3 90 53.3
Oeu058749.1 Olea europaea HOM05D007183 ORTHO05D008829 2.1e-14 84.0 61 63.9
Os02g0805400 Oryza sativa ssp. japonica HOM05D007183 ORTHO05D008829 1.2e-09 68.2 82 50.0
Zm00001eb426430 Zea mays HOM05D007183 ORTHO05D008829 9.9e-09 65.1 73 52.1


User provided reference genes

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