Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 0.0e+00 1322.8 665 100.0
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 3.0e-261 905.2 670 70.3
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 4.1e-247 858.2 684 66.1
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 1.4e-242 843.2 657 67.4
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 5.8e-241 837.8 676 65.7
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 4.6e-238 828.2 600 70.8
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 5.6e-236 821.2 628 67.5
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 3.4e-233 812.0 672 64.9
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 1.7e-232 809.7 589 69.8
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 1.7e-232 809.7 625 67.5
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 8.1e-219 764.2 531 71.9
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 2.6e-217 759.2 682 60.6
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 1.4e-207 726.9 660 60.8
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 2.7e-206 722.6 677 57.6
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 1.3e-205 720.3 673 57.1
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 4.1e-202 708.8 509 69.0
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 1.4e-199 700.3 607 60.0
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 1.8e-197 693.3 674 56.1
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 2.3e-197 693.0 585 61.7
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.1e-196 690.6 556 63.5
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 4.3e-196 688.7 669 57.1
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 7.4e-196 688.0 543 65.6
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 1.7e-195 686.8 615 60.0
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 2.8e-195 686.0 672 56.7
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 1.4e-194 683.7 591 61.6
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 2.4e-194 682.9 667 55.9
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 2.0e-193 679.9 498 67.3
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 1.3e-192 677.2 444 72.7
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 4.2e-191 672.2 605 58.2
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 6.1e-190 668.3 628 56.8
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 6.1e-190 668.3 624 58.0
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 7.9e-190 667.9 536 64.0
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 3.0e-189 666.0 672 54.9
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 3.0e-189 666.0 462 71.9
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 1.1e-188 664.1 590 60.2
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 2.6e-188 662.9 442 71.5
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 1.7e-187 660.2 590 60.0
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 5.3e-186 655.2 477 68.8
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 1.5e-185 653.7 587 58.1
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 2.6e-185 652.9 477 68.6
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 7.7e-185 651.4 561 61.9
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 1.7e-184 650.2 600 59.2
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 1.7e-184 650.2 557 60.7
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 2.9e-184 649.4 605 56.5
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 1.4e-183 647.1 532 63.0
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 1.9e-183 646.7 567 61.4
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 1.6e-182 643.7 471 68.8
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 2.7e-182 642.9 518 61.2
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 6.7e-181 638.3 629 56.9
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 1.5e-180 637.1 480 65.6
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 2.4e-178 629.8 532 61.1
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 2.2e-176 623.2 631 54.5
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 1.1e-175 620.9 670 52.4
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 2.5e-175 619.8 510 61.6
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 7.2e-175 618.2 507 61.1
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 8.0e-174 614.8 512 60.7
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 5.2e-173 612.1 443 67.7
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 7.5e-172 608.2 491 62.9
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 3.5e-169 599.4 513 60.8
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 1.0e-168 597.8 483 61.1
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 3.2e-167 592.8 507 59.4
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 3.6e-166 589.3 553 58.6
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 1.8e-165 587.0 583 53.7
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 1.3e-163 580.9 486 60.7
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 1.6e-161 573.9 593 53.3
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 1.9e-159 567.0 500 59.0
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 3.1e-154 549.7 418 63.6
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 3.4e-140 503.1 556 52.0
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 7.8e-137 491.9 372 63.4
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 4.8e-118 429.5 287 71.1
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 1.7e-115 421.0 457 47.7
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 6.4e-115 419.1 370 57.3
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 5.3e-109 399.4 450 52.9
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 1.2e-97 361.7 291 62.2
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 5.0e-91 339.7 420 50.2
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 7.9e-89 332.4 253 67.2
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 1.8e-88 331.3 375 47.7
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 2.5e-87 327.4 281 59.4
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 2.4e-69 267.7 280 50.4
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 7.0e-61 239.6 192 60.4
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 1.8e-40 171.8 133 57.1
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 3.0e-40 171.0 305 43.9
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 6.8e-40 169.9 147 59.9
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 2.7e-36 157.9 133 61.7
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 1.9e-29 135.2 78 75.6
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 5.4e-29 133.7 514 26.7
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 2.6e-23 114.8 126 51.6
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 1.5e-15 89.0 92 54.3
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 2.0e-15 88.6 79 55.7
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 4.1e-13 80.9 165 33.3
EL10Ac8g20531 Beta vulgaris HOM05D007621 ORTHO05D009631 9.2e-13 79.7 233 33.5
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 1.6e-12 79.0 185 32.4
Dinv40481 Davidia involucrata HOM05D041770 ORTHO05D034209 5.1e-11 73.9 53 75.5
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 6.6e-11 73.6 57 59.6
PRCOL_00005975 Prasinoderma coloniale HOM05D000032 ORTHO05D028824 8.6e-11 73.2 185 28.6
Cre03.g188750 Chlamydomonas reinhardtii HOM05D000032 ORTHO05D028824 3.3e-10 71.2 213 31.0
SGA_v2.0_scaffold26G11386 Striga asiatica HOM05D007621 ORTHO05D009631 4.7e-09 67.4 58 56.9
Haze_26842 Corylus avellana HOM05D000032 ORTHO05D028824 4.9e-06 57.4 154 31.2


User provided reference genes

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