Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40461 Davidia involucrata HOM05D000685 ORTHO05D000511 1.7e-68 262.7 151 100.0
GSVIVG01013778001 Vitis vinifera HOM05D000685 ORTHO05D000511 7.7e-08 61.2 28 96.4
Dinv15272 Davidia involucrata HOM05D000685 ORTHO05D000511 1.0e-07 60.8 27 100.0
Peaxi162Scf00710g00529 Petunia axillaris HOM05D000685 ORTHO05D000511 2.2e-07 59.7 42 64.3
Gohir.A01G162500 Gossypium hirsutum HOM05D000685 ORTHO05D000511 3.8e-07 58.9 28 92.9
Gohir.D01G149800 Gossypium hirsutum HOM05D000685 ORTHO05D000511 3.8e-07 58.9 28 92.9
Gorai.002G185900 Gossypium raimondii HOM05D000685 ORTHO05D000511 3.8e-07 58.9 28 92.9
Thecc.02G254000 Theobroma cacao HOM05D000685 ORTHO05D000511 3.8e-07 58.9 28 92.9
Ca_03142_v3 Cicer arietinum L. HOM05D000685 ORTHO05D000511 6.5e-07 58.2 28 89.3
Duzib119G0003 Durio zibethinus HOM05D000685 ORTHO05D000511 6.5e-07 58.2 28 89.3
Duzib251G0960 Durio zibethinus HOM05D000685 ORTHO05D000511 6.5e-07 58.2 28 89.3
Glyma.08G285200 Glycine max HOM05D000685 ORTHO05D000511 6.5e-07 58.2 28 89.3
Glyma.18G140400 Glycine max HOM05D000685 ORTHO05D000511 6.5e-07 58.2 28 89.3
Lj2g0026083 Lotus japonicus HOM05D000685 ORTHO05D000511 6.5e-07 58.2 28 89.3
Lalb_Chr05g0216751 Lupinus albus HOM05D000685 ORTHO05D000511 6.5e-07 58.2 28 89.3
Phvul.002G069700 Phaseolus vulgaris HOM05D000685 ORTHO05D000511 6.5e-07 58.2 28 89.3
VMungo1215G2676 Vigna mungo HOM05D000685 ORTHO05D000511 6.5e-07 58.2 28 89.3
Cfa009176 Carpinus fangiana HOM05D000685 ORTHO05D000511 8.5e-07 57.8 64 46.9
Cc11_g15350 Coffea canephora HOM05D000685 ORTHO05D000511 8.5e-07 57.8 28 92.9
Lalb_Chr16g0382171 Lupinus albus HOM05D000685 ORTHO05D000511 8.5e-07 57.8 28 85.7
Potri.008G189000 Populus trichocarpa HOM05D000685 ORTHO05D000511 8.5e-07 57.8 28 89.3
Hma1.2p1_0223F.1_g094360 Hydrangea macrophylla HOM05D000685 ORTHO05D000511 1.1e-06 57.4 28 85.7
CSS0034551 Camellia sinensis var. sinensis HOM05D000685 ORTHO05D000511 1.5e-06 57.0 29 93.1
Ciclev10033714m.g Citrus clementina HOM05D000685 ORTHO05D000511 1.5e-06 57.0 28 89.3
Haze_12210 Corylus avellana HOM05D000685 ORTHO05D000511 1.9e-06 56.6 64 45.3
MD13G1094900 Malus domestica HOM05D000685 ORTHO05D000511 1.9e-06 56.6 28 85.7
Atru.chr11.2062 Acer truncatum HOM05D000685 ORTHO05D000511 2.5e-06 56.2 27 88.9
Glyma.04G094800 Glycine max HOM05D000685 ORTHO05D000511 2.5e-06 56.2 28 82.1
Medtr5g034030 Medicago truncatula HOM05D000685 ORTHO05D000511 2.5e-06 56.2 28 85.7
Psat2g105360 Pisum sativum HOM05D000685 ORTHO05D000511 2.5e-06 56.2 28 85.7
TPR.G21090 Trifolium pratense HOM05D000685 ORTHO05D000511 2.5e-06 56.2 28 85.7
Actinidia13497 Actinidia chinensis HOM05D000685 ORTHO05D000511 3.2e-06 55.8 28 89.3
Nitab4.5_0000203g0270 Nicotiana tabacum HOM05D000685 ORTHO05D000511 3.2e-06 55.8 28 85.7
Nitab4.5_0001873g0060 Nicotiana tabacum HOM05D000685 ORTHO05D000511 3.2e-06 55.8 28 85.7
arahy.Tifrunner.gnm1.ann1.KKAN03 Arachis hypogaea HOM05D000685 ORTHO05D000511 4.2e-06 55.5 28 85.7
arahy.Tifrunner.gnm1.ann1.H309J3 Arachis hypogaea HOM05D000685 ORTHO05D000511 5.5e-06 55.1 28 85.7
Glyma.01G029300 Glycine max HOM05D000685 ORTHO05D000511 5.5e-06 55.1 28 82.1
Phvul.003G061800 Phaseolus vulgaris HOM05D000685 ORTHO05D000511 5.5e-06 55.1 28 82.1
Potri.010G042400 Populus trichocarpa HOM05D000685 ORTHO05D000511 5.5e-06 55.1 28 85.7
CANSAT01G1163 Cannabis sativa HOM05D000685 ORTHO05D000511 9.4e-06 54.3 28 85.7
Lsat_1_v5_gn_0_27800 Lactuca sativa HOM05D000685 ORTHO05D000511 9.4e-06 54.3 29 86.2
VMungo0251G3338 Vigna mungo HOM05D000685 ORTHO05D000511 9.4e-06 54.3 28 82.1


User provided reference genes

Program Settings