Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40398 Davidia involucrata HOM05D005174 ORTHO05D006784 1.6e-175 619.4 320 100.0
CSS0048949 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 3.8e-137 491.9 318 80.2
CSS0047682 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 8.4e-137 490.7 318 79.9
MSTRG.1457 Avicennia marina HOM05D005174 ORTHO05D006784 9.3e-128 460.7 320 75.0
Cc01_g07610 Coffea canephora HOM05D005174 ORTHO05D006784 5.6e-125 451.4 318 73.6
PGSC0003DMG400017574 Solanum tuberosum HOM05D005174 ORTHO05D006784 1.3e-124 450.3 320 70.9
TAR381G1686 Trochodendron aralioides HOM05D005174 ORTHO05D006784 2.1e-124 449.5 319 74.3
GSVIVG01008896001 Vitis vinifera HOM05D005174 ORTHO05D006784 1.4e-123 446.8 322 73.0
Oeu047941.1 Olea europaea HOM05D005174 ORTHO05D006784 2.9e-121 439.1 328 70.1
Prupe.1G501000 Prunus persica HOM05D005174 ORTHO05D006784 4.9e-121 438.3 320 71.6
Solyc06g060420.3 Solanum lycopersicum HOM05D005174 ORTHO05D006784 1.1e-120 437.2 320 69.7
Sopen06g020560 Solanum pennellii HOM05D005174 ORTHO05D006784 4.2e-120 435.3 320 69.1
SalBow7G2597 Salvia bowleyana HOM05D005174 ORTHO05D006784 1.6e-119 433.3 361 65.1
Glyma.06G111200 Glycine max HOM05D005174 ORTHO05D006784 2.1e-119 433.0 319 70.5
Gorai.005G090400 Gossypium raimondii HOM05D005174 ORTHO05D006784 2.7e-119 432.6 322 71.7
COL.COLO4_12205 Corchorus olitorius HOM05D005174 ORTHO05D006784 4.6e-119 431.8 322 69.9
Gorai.009G244400 Gossypium raimondii HOM05D005174 ORTHO05D006784 2.3e-118 429.5 322 71.7
Ca_13578_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 2.5e-117 426.0 321 71.0
Migut.C01145 Erythranthe guttata HOM05D005174 ORTHO05D006784 2.5e-117 426.0 321 69.8
Gohir.A05G233700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 4.3e-117 425.2 322 70.8
Lj1g0014313 Lotus japonicus HOM05D005174 ORTHO05D006784 4.3e-117 425.2 321 71.3
Lj5g0013947 Lotus japonicus HOM05D005174 ORTHO05D006784 4.3e-117 425.2 321 71.0
Phvul.009G123200 Phaseolus vulgaris HOM05D005174 ORTHO05D006784 4.3e-117 425.2 323 70.3
Gohir.D05G236100 Gossypium hirsutum HOM05D005174 ORTHO05D006784 5.6e-117 424.9 322 71.1
SGA_v2.0_scaffold52G18977 Striga asiatica HOM05D005174 ORTHO05D006784 5.6e-117 424.9 321 69.2
Nitab4.5_0008211g0030 Nicotiana tabacum HOM05D005174 ORTHO05D006784 1.3e-116 423.7 333 66.7
Thecc.08G122000 Theobroma cacao HOM05D005174 ORTHO05D006784 1.6e-116 423.3 322 70.5
VMungo1309G0682 Vigna mungo HOM05D005174 ORTHO05D006784 3.6e-116 422.2 324 69.8
HanXRQChr02g0041151 Helianthus annuus HOM05D005174 ORTHO05D006784 4.8e-116 421.8 320 70.9
TWI56G0960 Tripterygium wilfordii HOM05D005174 ORTHO05D006784 4.8e-116 421.8 313 70.0
Duzib093G0119 Durio zibethinus HOM05D005174 ORTHO05D006784 1.1e-115 420.6 322 69.6
Psat5g120840 Pisum sativum HOM05D005174 ORTHO05D006784 1.1e-115 420.6 321 70.1
ECA232G2439 Erigeron canadensis HOM05D005174 ORTHO05D006784 1.4e-115 420.2 316 69.0
arahy.Tifrunner.gnm1.ann1.3YB7R6 Arachis hypogaea HOM05D005174 ORTHO05D006784 3.1e-115 419.1 318 70.8
Eucgr.H00450 Eucalyptus grandis HOM05D005174 ORTHO05D006784 3.1e-115 419.1 320 68.4
Duzib116G0013 Durio zibethinus HOM05D005174 ORTHO05D006784 1.5e-114 416.8 335 67.2
Gohir.D02G080900 Gossypium hirsutum HOM05D005174 ORTHO05D006784 3.4e-114 415.6 322 70.2
Lalb_Chr08g0241531 Lupinus albus HOM05D005174 ORTHO05D006784 4.5e-114 415.2 319 68.0
PGR044G1014 Punica granatum HOM05D005174 ORTHO05D006784 1.7e-113 413.3 322 67.1
MD15G1352500 Malus domestica HOM05D005174 ORTHO05D006784 3.8e-113 412.1 319 67.7
QL09p035644 Quercus lobata HOM05D005174 ORTHO05D006784 3.8e-113 412.1 311 70.4
Actinidia29457 Actinidia chinensis HOM05D005174 ORTHO05D006784 1.1e-112 410.6 319 71.2
Manes.02G161600 Manihot esculenta HOM05D005174 ORTHO05D006784 7.1e-112 407.9 322 66.8
Medtr3g072620 Medicago truncatula HOM05D005174 ORTHO05D006784 9.3e-112 407.5 319 69.3
Cpa.g.sc36.39 Carica papaya HOM05D005174 ORTHO05D006784 2.1e-111 406.4 307 71.0
Cfa015995 Carpinus fangiana HOM05D005174 ORTHO05D006784 4.6e-111 405.2 325 67.4
CANSAT25G0921 Cannabis sativa HOM05D005174 ORTHO05D006784 1.8e-110 403.3 321 66.4
Hund24749 Selenicereus undatus HOM05D005174 ORTHO05D006784 1.8e-110 403.3 328 64.3
vmacro00818 Vaccinium macrocarpon HOM05D005174 ORTHO05D006784 1.8e-110 403.3 300 72.7
ClCG11G015640 Citrullus lanatus HOM05D005174 ORTHO05D006784 2.3e-110 402.9 315 65.1
Potri.005G175900 Populus trichocarpa HOM05D005174 ORTHO05D006784 2.3e-110 402.9 320 64.7
Glyma.14G147200 Glycine max HOM05D005174 ORTHO05D006784 6.7e-110 401.4 321 66.0
Nn5g28198 Nelumbo nucifera HOM05D005174 ORTHO05D006784 1.5e-109 400.2 313 67.1
RcHm_v2.0_Chr6g0295461 Rosa chinensis HOM05D005174 ORTHO05D006784 1.5e-109 400.2 318 67.0
CsaV3_4G028370 Cucumis sativus L. HOM05D005174 ORTHO05D006784 3.3e-109 399.1 315 64.4
Sed0012589 Sechium edule HOM05D005174 ORTHO05D006784 3.3e-109 399.1 316 64.6
Lalb_Chr17g0343851 Lupinus albus HOM05D005174 ORTHO05D006784 7.4e-109 397.9 323 66.3
Ciclev10001813m.g Citrus clementina HOM05D005174 ORTHO05D006784 9.6e-109 397.5 318 66.0
FvH4_2g26610 Fragaria vesca HOM05D005174 ORTHO05D006784 2.8e-108 396.0 318 66.7
FAN24G0526 Fragaria x ananassa HOM05D005174 ORTHO05D006784 2.8e-108 396.0 318 66.7
CiPaw.05G223800 Carya illinoinensis HOM05D005174 ORTHO05D006784 1.8e-107 393.3 308 69.2
RhsimUnG0094500 Rhododendron simsii HOM05D005174 ORTHO05D006784 2.4e-107 392.9 327 67.6
Peaxi162Scf00051g00623 Petunia axillaris HOM05D005174 ORTHO05D006784 3.1e-107 392.5 320 65.9
Lsat_1_v5_gn_4_135460 Lactuca sativa HOM05D005174 ORTHO05D006784 4.0e-107 392.1 344 62.5
TPR.G22992 Trifolium pratense HOM05D005174 ORTHO05D006784 5.3e-107 391.7 325 66.5
arahy.Tifrunner.gnm1.ann1.Z8FB5F Arachis hypogaea HOM05D005174 ORTHO05D006784 3.4e-106 389.0 373 59.8
Aqoxy6G00176 Aquilegia oxysepala HOM05D005174 ORTHO05D006784 1.0e-105 387.5 313 64.9
Sc01g0001320 Simmondsia chinensis HOM05D005174 ORTHO05D006784 6.5e-105 384.8 312 64.4
Psat2g085920 Pisum sativum HOM05D005174 ORTHO05D006784 1.1e-104 384.0 372 58.9
THA.LOC104806814 Tarenaya hassleriana HOM05D005174 ORTHO05D006784 4.2e-104 382.1 320 63.4
AUR62042433 Chenopodium quinoa HOM05D005174 ORTHO05D006784 1.0e-102 377.5 327 61.8
Eucgr.L02995 Eucalyptus grandis HOM05D005174 ORTHO05D006784 1.3e-102 377.1 318 64.5
FAN20G1758 Fragaria x ananassa HOM05D005174 ORTHO05D006784 5.7e-101 371.7 318 64.5
Sp1g33700 Schrenkiella parvula HOM05D005174 ORTHO05D006784 4.8e-100 368.6 320 62.5
AUR62018164 Chenopodium quinoa HOM05D005174 ORTHO05D006784 8.2e-100 367.9 343 58.9
AL1G52500 Arabidopsis lyrata HOM05D005174 ORTHO05D006784 1.8e-99 366.7 320 60.3
Carub.0001s3538 Capsella rubella HOM05D005174 ORTHO05D006784 5.3e-99 365.2 321 61.1
PSO782G4297 Papaver somniferum HOM05D005174 ORTHO05D006784 1.2e-98 364.0 325 61.2
Sabra05G0132500 Salix brachista HOM05D005174 ORTHO05D006784 2.0e-98 363.2 377 54.1
Nitab4.5_0000633g0140 Nicotiana tabacum HOM05D005174 ORTHO05D006784 3.4e-98 362.5 318 61.0
Atru.chr13.1416 Acer truncatum HOM05D005174 ORTHO05D006784 1.3e-97 360.5 298 64.1
PSO170G4538 Papaver somniferum HOM05D005174 ORTHO05D006784 1.3e-97 360.5 325 60.6
CAN.G1396.5 Capsicum annuum HOM05D005174 ORTHO05D006784 2.9e-97 359.4 254 71.3
BcaB04g17581 Brassica carinata HOM05D005174 ORTHO05D006784 6.5e-97 358.2 318 60.7
ATR0193G024 Amborella trichopoda HOM05D005174 ORTHO05D006784 8.5e-97 357.8 318 61.3
AT1G44835 Arabidopsis thaliana HOM05D005174 ORTHO05D006784 1.1e-96 357.5 320 59.7
CARHR036100 Cardamine hirsuta HOM05D005174 ORTHO05D006784 1.4e-96 357.1 318 60.1
Aa31LG6G9210 Aethionema arabicum HOM05D005174 ORTHO05D006784 9.3e-96 354.4 315 59.4
Thhalv10004660m.g Eutrema salsugineum HOM05D005174 ORTHO05D006784 3.6e-95 352.4 320 60.6
A08p06300 Brassica napus HOM05D005174 ORTHO05D006784 4.6e-95 352.1 318 60.1
Thhalv10021201m.g Eutrema salsugineum HOM05D005174 ORTHO05D006784 1.0e-94 350.9 320 60.3
BcaC07g37283 Brassica carinata HOM05D005174 ORTHO05D006784 3.0e-94 349.4 318 59.7
C08p07120 Brassica napus HOM05D005174 ORTHO05D006784 3.0e-94 349.4 318 59.7
BolC8t47557H Brassica oleracea HOM05D005174 ORTHO05D006784 3.0e-94 349.4 318 59.7
BolC6t35233H Brassica oleracea HOM05D005174 ORTHO05D006784 3.9e-94 349.0 321 59.2
BraA08t32633Z Brassica rapa HOM05D005174 ORTHO05D006784 3.9e-94 349.0 318 60.1
BcaC08g42881 Brassica carinata HOM05D005174 ORTHO05D006784 5.1e-94 348.6 318 58.8
EL10Ac2g03105 Beta vulgaris HOM05D005174 ORTHO05D006784 3.3e-93 345.9 306 60.8
A10p07300 Brassica napus HOM05D005174 ORTHO05D006784 4.3e-93 345.5 320 59.7
BraSC36t46091Z Brassica rapa HOM05D005174 ORTHO05D006784 4.3e-93 345.5 320 59.7
C06p00970 Brassica napus HOM05D005174 ORTHO05D006784 2.2e-92 343.2 320 58.1
Sc01g0001280 Simmondsia chinensis HOM05D005174 ORTHO05D006784 1.2e-87 327.4 266 64.3
CDE05G2191 Ceratophyllum demersum HOM05D005174 ORTHO05D006784 1.6e-87 327.0 318 55.0
Os02g0767700 Oryza sativa ssp. japonica HOM05D005174 ORTHO05D006784 4.6e-87 325.5 312 55.8
Zm00001eb193560 Zea mays HOM05D005174 ORTHO05D006784 3.7e-84 315.8 314 56.1
MBI03_g33021_MAGBIO Magnolia biondii HOM05D005174 ORTHO05D006784 2.4e-83 313.2 267 63.3
DCAR_017401 Daucus carota HOM05D005174 ORTHO05D006784 3.1e-83 312.8 208 78.4
MELO3C032634.2 Cucumis melo HOM05D005174 ORTHO05D006784 6.9e-83 311.6 304 57.2
FAN15G0922 Fragaria x ananassa HOM05D005174 ORTHO05D006784 1.0e-81 307.8 357 52.9
FAN27G1282 Fragaria x ananassa HOM05D005174 ORTHO05D006784 1.7e-81 307.0 313 57.2
unitig_82.g26987 Utricularia gibba HOM05D005174 ORTHO05D006784 3.6e-79 299.3 309 56.0
Gohir.A02G073700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 4.1e-75 285.8 320 54.7
Ah.10g032020 Amaranthus hybridus HOM05D005174 ORTHO05D006784 1.4e-70 270.8 325 51.7
SEGI_02373 Sequoiadendron giganteum HOM05D005174 ORTHO05D006784 1.6e-66 257.3 271 52.0
Mapoly0010s0001 Marchantia polymorpha HOM05D005174 ORTHO05D006784 5.0e-65 252.3 311 46.3
Pp3c18_22250 Physcomitrium patens HOM05D005174 ORTHO05D006784 3.6e-63 246.1 315 45.7
Lj7A337T25 Lonicera japonica HOM05D005174 ORTHO05D006784 3.5e-58 229.6 178 68.5
HPP92_001042 Vanilla planifolia HOM05D005174 ORTHO05D006784 2.8e-55 219.9 325 40.9
Cre10.g425950 Chlamydomonas reinhardtii HOM05D005174 ORTHO05D006784 9.8e-45 184.9 322 36.6
Haze_00470 Corylus avellana HOM05D005174 ORTHO05D006784 4.9e-44 182.6 110 83.6
FAN20G0512 Fragaria x ananassa HOM05D005174 ORTHO05D006784 4.9e-44 182.6 267 43.4
PRCOL_00005180 Prasinoderma coloniale HOM05D005174 ORTHO05D006784 3.1e-38 163.3 189 46.6
Haze_00471 Corylus avellana HOM05D005174 ORTHO05D006784 2.0e-37 160.6 205 49.3
MD08G1166300 Malus domestica HOM05D005174 ORTHO05D006784 2.6e-37 160.2 110 73.6
Hund16845 Selenicereus undatus HOM05D005174 ORTHO05D006784 5.8e-37 159.1 105 76.2
Sabra15G0076900 Salix brachista HOM05D000453 ORTHO05D000387 1.3e-33 147.9 136 60.3
Ca_03754_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 8.3e-28 128.6 100 67.0
SMO200G0142 Selaginella moellendorffii HOM05D000188 ORTHO05D007139 5.4e-27 125.9 251 36.7
Glyma.04G251502 Glycine max HOM05D005174 ORTHO05D006784 1.6e-23 114.4 110 54.5
Ca_03755_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 4.4e-21 106.3 102 57.8
Cfa010764 Carpinus fangiana HOM05D005174 ORTHO05D006784 1.7e-17 94.4 96 54.2
Sabra02G0067100 Salix brachista HOM05D005174 ORTHO05D006784 3.0e-17 93.6 337 28.2
CiPaw.05G223900 Carya illinoinensis HOM05D005174 ORTHO05D006784 4.7e-15 86.3 80 60.0
arahy.Tifrunner.gnm1.ann1.032V6W Arachis hypogaea HOM05D005174 ORTHO05D015215 2.6e-13 80.5 46 84.8
arahy.Tifrunner.gnm1.ann1.PAU1NR Arachis hypogaea HOM05D005174 ORTHO05D015215 2.6e-13 80.5 46 84.8
arahy.Tifrunner.gnm1.ann1.RE5YQ2 Arachis hypogaea HOM05D005174 ORTHO05D015215 2.6e-13 80.5 46 84.8
Duzib041G0272 Durio zibethinus HOM05D005174 ORTHO05D015215 4.4e-13 79.7 70 60.0
Oeu059427.1 Olea europaea HOM05D005174 ORTHO05D006784 1.7e-12 77.8 52 65.4
arahy.Tifrunner.gnm1.ann1.S56SQA Arachis hypogaea HOM05D005174 ORTHO05D015215 2.2e-12 77.4 67 58.2
arahy.Tifrunner.gnm1.ann1.W2W6PZ Arachis hypogaea HOM05D005174 ORTHO05D015215 3.8e-12 76.6 45 82.2
MBI04_g30787_MAGBIO Magnolia biondii HOM05D005174 ORTHO05D006784 3.2e-11 73.6 70 51.4
Potri.002G085700 Populus trichocarpa HOM05D005174 ORTHO05D050453 7.1e-11 72.4 54 66.7
SEGI_30371 Sequoiadendron giganteum HOM05D005174 ORTHO05D050453 3.5e-10 70.1 53 64.2
FAN24G2292 Fragaria x ananassa HOM05D005174 ORTHO05D006784 1.9e-08 64.3 124 37.1
arahy.Tifrunner.gnm1.ann1.9F26EH Arachis hypogaea HOM05D005174 ORTHO05D015215 6.2e-07 59.3 51 62.7
SGA_v2.0_scaffold24G10473 Striga asiatica HOM05D021410 ORTHO05D401290 6.2e-07 59.3 36 75.0


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