Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40342 Davidia involucrata HOM05D005965 ORTHO05D007283 1.2e-205 719.5 358 100.0
CSS0001755 Camellia sinensis var. sinensis HOM05D005965 ORTHO05D007283 6.0e-176 620.9 339 90.0
Actinidia21493 Actinidia chinensis HOM05D005965 ORTHO05D007283 1.2e-171 606.7 339 87.0
Hma1.2p1_1292F.1_g273670 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 1.2e-171 606.7 339 88.5
MD04G1201200 Malus domestica HOM05D005965 ORTHO05D007283 1.3e-167 593.2 348 84.2
Rhsim05G0139400 Rhododendron simsii HOM05D005965 ORTHO05D007283 8.7e-167 590.5 378 78.6
QL03p021207 Quercus lobata HOM05D005965 ORTHO05D007283 3.3e-166 588.6 339 85.3
Lj9A144T46 Lonicera japonica HOM05D005965 ORTHO05D007283 2.1e-165 585.9 341 85.3
Prupe.6G321300 Prunus persica HOM05D005965 ORTHO05D007283 3.6e-165 585.1 340 84.7
Manes.08G118100 Manihot esculenta HOM05D005965 ORTHO05D007283 5.8e-163 577.8 339 83.5
GSVIVG01031150001 Vitis vinifera HOM05D005965 ORTHO05D007283 7.6e-163 577.4 340 84.4
DCAR_003352 Daucus carota HOM05D005965 ORTHO05D007283 2.2e-162 575.9 355 79.7
Cfa006624 Carpinus fangiana HOM05D005965 ORTHO05D007283 4.9e-162 574.7 341 84.2
Gohir.D11G277600 Gossypium hirsutum HOM05D005965 ORTHO05D007283 7.1e-161 570.9 340 82.9
Atru.chr2.26 Acer truncatum HOM05D005965 ORTHO05D007283 7.9e-160 567.4 340 82.9
COL.COLO4_10514 Corchorus olitorius HOM05D005965 ORTHO05D007283 7.9e-160 567.4 340 82.4
Sabra13G0016500 Salix brachista HOM05D005965 ORTHO05D007283 1.3e-159 566.6 340 83.2
Sabra13G0020500 Salix brachista HOM05D005965 ORTHO05D007283 1.3e-159 566.6 340 83.2
Ciclev10001128m.g Citrus clementina HOM05D005965 ORTHO05D007283 1.8e-159 566.2 342 82.7
Gorai.007G299800 Gossypium raimondii HOM05D005965 ORTHO05D007283 6.7e-159 564.3 346 81.5
CiPaw.07G021000 Carya illinoinensis HOM05D005965 ORTHO05D007283 1.5e-158 563.1 354 79.4
Oeu043357.2 Olea europaea HOM05D005965 ORTHO05D007283 7.4e-158 560.8 339 82.0
TAR362G0609 Trochodendron aralioides HOM05D005965 ORTHO05D007283 1.3e-157 560.1 341 81.5
Cpa.g.sc48.91 Carica papaya HOM05D005965 ORTHO05D007283 6.2e-157 557.8 348 79.9
MSTRG.20421 Avicennia marina HOM05D005965 ORTHO05D007283 8.1e-157 557.4 339 80.5
Nn3g21434 Nelumbo nucifera HOM05D005965 ORTHO05D007283 1.8e-156 556.2 345 79.7
Potri.013G017500 Populus trichocarpa HOM05D005965 ORTHO05D007283 5.3e-156 554.7 340 81.8
TWI12G0462 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 1.2e-155 553.5 348 80.5
Sed0024378 Sechium edule HOM05D005965 ORTHO05D007283 7.6e-155 550.8 340 79.7
CsaV3_2G006620 Cucumis sativus L. HOM05D005965 ORTHO05D007283 8.4e-154 547.4 344 77.9
Aqoxy2G02987 Aquilegia oxysepala HOM05D005965 ORTHO05D007283 2.1e-152 542.7 344 78.8
ClCG02G015450 Citrullus lanatus HOM05D005965 ORTHO05D007283 4.6e-152 541.6 340 78.8
Sopen10g013470 Solanum pennellii HOM05D005965 ORTHO05D007283 1.0e-151 540.4 343 78.4
vmacro19747 Vaccinium macrocarpon HOM05D005965 ORTHO05D007283 2.3e-151 539.3 311 84.9
PSO151G0070 Papaver somniferum HOM05D005965 ORTHO05D007283 3.9e-151 538.5 342 78.9
Solyc10g044780.2 Solanum lycopersicum HOM05D005965 ORTHO05D007283 3.9e-151 538.5 343 78.1
Peaxi162Scf00949g00112 Petunia axillaris HOM05D005965 ORTHO05D007283 5.1e-151 538.1 343 78.4
Sc16g0008610 Simmondsia chinensis HOM05D005965 ORTHO05D007283 5.1e-151 538.1 340 77.9
Nitab4.5_0001129g0130 Nicotiana tabacum HOM05D005965 ORTHO05D007283 8.7e-151 537.3 344 78.8
PGSC0003DMG400007478 Solanum tuberosum HOM05D005965 ORTHO05D007283 8.7e-151 537.3 343 77.8
Hma1.2p1_1292F.1_g273680 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 1.9e-150 536.2 304 86.5
PGR031G2641 Punica granatum HOM05D005965 ORTHO05D007283 1.9e-150 536.2 339 77.0
Migut.G01001 Erythranthe guttata HOM05D005965 ORTHO05D007283 3.3e-150 535.4 344 77.3
arahy.Tifrunner.gnm1.ann1.DHC6FB Arachis hypogaea HOM05D005965 ORTHO05D007283 5.6e-150 534.6 342 76.9
Gohir.A11G267700 Gossypium hirsutum HOM05D005965 ORTHO05D007283 5.6e-150 534.6 359 76.3
ECA246G4331 Erigeron canadensis HOM05D005965 ORTHO05D007283 2.1e-149 532.7 341 78.3
Carub.0003s0477 Capsella rubella HOM05D005965 ORTHO05D007283 2.8e-149 532.3 338 76.6
Lj1g0019406 Lotus japonicus HOM05D005965 ORTHO05D007283 4.8e-149 531.6 342 76.9
Cc02_g33090 Coffea canephora HOM05D005965 ORTHO05D007283 8.2e-149 530.8 345 78.3
Migut.G01092 Erythranthe guttata HOM05D005965 ORTHO05D007283 8.2e-149 530.8 341 78.0
arahy.Tifrunner.gnm1.ann1.79NSX3 Arachis hypogaea HOM05D005965 ORTHO05D007283 1.1e-148 530.4 342 76.3
TPR.G33209 Trifolium pratense HOM05D005965 ORTHO05D007283 4.0e-148 528.5 348 75.0
RcHm_v2.0_Chr3g0455661 Rosa chinensis HOM05D005965 ORTHO05D007283 5.3e-148 528.1 340 78.5
AT3G05480 Arabidopsis thaliana HOM05D005965 ORTHO05D007283 6.9e-148 527.7 348 74.4
Thhalv10020753m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 1.2e-147 526.9 348 74.4
FvH4_6g06510 Fragaria vesca HOM05D005965 ORTHO05D007283 1.2e-147 526.9 339 78.2
FAN14G0885 Fragaria x ananassa HOM05D005965 ORTHO05D007283 1.2e-147 526.9 339 78.2
Medtr7g113100 Medicago truncatula HOM05D005965 ORTHO05D007283 1.2e-147 526.9 338 76.9
AL3G16080 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 2.0e-147 526.2 349 73.9
FAN05G3147 Fragaria x ananassa HOM05D005965 ORTHO05D007283 3.4e-147 525.4 339 77.9
VMungo0540G0496 Vigna mungo HOM05D005965 ORTHO05D007283 4.5e-147 525.0 341 76.2
CAN.G1.32 Capsicum annuum HOM05D005965 ORTHO05D007283 5.8e-147 524.6 343 76.4
THA.LOC104818713 Tarenaya hassleriana HOM05D005965 ORTHO05D007283 5.8e-147 524.6 338 75.7
Glyma.19G233800 Glycine max HOM05D005965 ORTHO05D007283 2.2e-146 522.7 339 76.7
Phvul.006G090000 Phaseolus vulgaris HOM05D005965 ORTHO05D007283 2.9e-146 522.3 343 75.8
Lalb_Chr18g0045721 Lupinus albus HOM05D005965 ORTHO05D007283 1.4e-145 520.0 342 74.9
Glyma.03G236100 Glycine max HOM05D005965 ORTHO05D007283 5.5e-145 518.1 341 75.4
C05p61750 Brassica napus HOM05D005965 ORTHO05D007283 1.2e-144 516.9 338 74.0
Eucgr.H04531 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.6e-144 516.5 340 76.2
BcaC05g30118 Brassica carinata HOM05D005965 ORTHO05D007283 2.1e-144 516.2 338 73.7
Hund07094 Selenicereus undatus HOM05D005965 ORTHO05D007283 2.1e-144 516.2 339 75.8
HanXRQChr03g0072661 Helianthus annuus HOM05D005965 ORTHO05D007283 4.6e-144 515.0 339 77.6
HanXRQChr03g0072671 Helianthus annuus HOM05D005965 ORTHO05D007283 4.6e-144 515.0 339 77.6
Ca_05803_v3 Cicer arietinum L. HOM05D005965 ORTHO05D007283 7.9e-144 514.2 368 70.9
Lsat_1_v5_gn_9_124801 Lactuca sativa HOM05D005965 ORTHO05D007283 7.9e-144 514.2 342 76.3
Sp3g04310 Schrenkiella parvula HOM05D005965 ORTHO05D007283 7.9e-144 514.2 338 74.0
Psat0s4314g0040 Pisum sativum HOM05D005965 ORTHO05D007283 5.1e-143 511.5 372 69.1
Aa31LG5G15920 Aethionema arabicum HOM05D005965 ORTHO05D007283 1.9e-142 509.6 348 73.0
MBI19_g29225_MAGBIO Magnolia biondii HOM05D005965 ORTHO05D007283 1.9e-142 509.6 352 73.0
FAN02G0246 Fragaria x ananassa HOM05D005965 ORTHO05D007283 1.6e-141 506.5 340 75.6
unitig_699.g19668 Utricularia gibba HOM05D005965 ORTHO05D007283 6.3e-141 504.6 343 73.2
BcaC05g30164 Brassica carinata HOM05D005965 ORTHO05D007283 1.1e-140 503.8 363 69.4
BolC5t34833H Brassica oleracea HOM05D005965 ORTHO05D007283 1.8e-140 503.1 354 70.3
EL10Ac4g09921 Beta vulgaris HOM05D005965 ORTHO05D007283 5.9e-139 498.0 341 72.4
Eucgr.H04558 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.1e-137 493.8 346 72.3
Ah.04g161100 Amaranthus hybridus HOM05D005965 ORTHO05D007283 1.4e-137 493.4 341 72.4
AUR62000770 Chenopodium quinoa HOM05D005965 ORTHO05D007283 5.5e-137 491.5 349 71.9
Migut.G01320 Erythranthe guttata HOM05D005965 ORTHO05D007283 2.2e-130 469.5 342 71.3
SGA_v2.0_scaffold172G38992 Striga asiatica HOM05D005965 ORTHO05D007283 3.2e-129 465.7 366 67.2
ATR0796G244 Amborella trichopoda HOM05D005965 ORTHO05D007283 7.2e-129 464.5 352 65.3
HPP92_000400 Vanilla planifolia HOM05D005965 ORTHO05D007283 2.1e-128 463.0 352 66.2
HPP92_000403 Vanilla planifolia HOM05D005965 ORTHO05D007283 6.1e-128 461.5 352 65.9
SHI18108 Sapria himalayana HOM05D005965 ORTHO05D007283 1.0e-127 460.7 303 77.2
Haze_04145 Corylus avellana HOM05D005965 ORTHO05D007283 8.2e-125 451.1 255 85.5
Thecc.05G312500 Theobroma cacao HOM05D005965 ORTHO05D007283 2.9e-122 442.6 256 84.0
SEGI_33282 Sequoiadendron giganteum HOM05D005965 ORTHO05D007283 4.4e-118 428.7 352 59.4
AUR62005199 Chenopodium quinoa HOM05D005965 ORTHO05D007283 1.3e-117 427.2 341 64.8
MELO3C031536.2 Cucumis melo HOM05D005965 ORTHO05D007283 1.0e-114 417.5 325 66.2
Eucgr.H04576 Eucalyptus grandis HOM05D005965 ORTHO05D007283 5.0e-114 415.2 253 80.2
CARHR079860 Cardamine hirsuta HOM05D005965 ORTHO05D007283 1.9e-113 413.3 255 76.9
BraA05t23035Z Brassica rapa HOM05D005965 ORTHO05D007283 1.9e-105 386.7 248 74.2
Eucgr.H04573 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.5e-105 386.3 309 64.4
Os03g0345100 Oryza sativa ssp. japonica HOM05D005965 ORTHO05D007283 5.2e-103 378.6 352 57.1
Eucgr.H04556 Eucalyptus grandis HOM05D005965 ORTHO05D007283 7.5e-102 374.8 291 68.4
Mapoly0078s0014 Marchantia polymorpha HOM05D005965 ORTHO05D007283 9.8e-102 374.4 347 55.9
CDE02G1352 Ceratophyllum demersum HOM05D005965 ORTHO05D007283 2.0e-99 366.7 287 62.7
Pp3c7_570 Physcomitrium patens HOM05D005965 ORTHO05D007283 3.8e-98 362.5 360 50.8
Nitab4.5_0001057g0090 Nicotiana tabacum HOM05D005965 ORTHO05D007283 8.6e-98 361.3 231 77.5
SMO134G0282 Selaginella moellendorffii HOM05D005965 ORTHO05D007283 4.2e-97 359.0 343 54.8
Pp3c15_2650 Physcomitrium patens HOM05D005965 ORTHO05D007283 5.7e-94 348.6 350 51.1
SHI32441 Sapria himalayana HOM05D005965 ORTHO05D007283 5.7e-94 348.6 319 61.4
BraA05t19070Z Brassica rapa HOM05D005965 ORTHO05D007283 2.8e-93 346.3 241 70.1
CBR_g180 Chara braunii HOM05D005965 ORTHO05D007283 1.0e-87 327.8 377 47.7
Zm00001eb016590 Zea mays HOM05D005965 ORTHO05D007283 7.8e-75 285.0 229 60.7
Eucgr.H04569 Eucalyptus grandis HOM05D005965 ORTHO05D007283 5.4e-68 262.3 346 46.8
Eucgr.H04571 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.0e-66 258.1 334 47.0
AL3G16050 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 1.1e-55 221.5 303 43.6
Thecc.07G184800 Theobroma cacao HOM05D005965 ORTHO05D007283 4.4e-54 216.1 234 54.7
Psat6g098120 Pisum sativum HOM05D005965 ORTHO05D007283 6.4e-53 212.2 160 65.0
Thhalv10022144m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 6.4e-45 185.7 248 46.4
QL03p021253 Quercus lobata HOM05D005965 ORTHO05D007283 1.5e-38 164.5 93 82.8
PSO017G4250 Papaver somniferum HOM05D005965 ORTHO05D007283 2.1e-35 154.1 122 64.8
MCO01G074 Micromonas commoda HOM05D005965 ORTHO05D007283 1.5e-33 147.9 334 32.3
TAR633G2454 Trochodendron aralioides HOM05D005965 ORTHO05D007283 1.1e-28 131.7 134 56.7
Thecc.07G184700 Theobroma cacao HOM05D005965 ORTHO05D007283 1.4e-28 131.3 82 81.7
Haze_04144 Corylus avellana HOM05D005965 ORTHO05D007283 2.1e-27 127.5 86 77.9
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 3.3e-25 120.2 59 89.8
Eucgr.H04575 Eucalyptus grandis HOM05D005965 ORTHO05D007283 8.2e-24 115.5 125 49.6
Cre16.g682950 Chlamydomonas reinhardtii HOM05D005965 ORTHO05D007283 2.4e-23 114.0 201 35.3
CARHR079870 Cardamine hirsuta HOM05D005965 ORTHO05D007283 1.0e-21 108.6 95 63.2
TWI56G1489 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 5.1e-18 96.3 73 69.9
Nitab4.5_0000524g0030 Nicotiana tabacum HOM05D005965 ORTHO05D007283 1.3e-16 91.7 79 63.3
SMO274G0013 Selaginella moellendorffii HOM05D005965 ORTHO05D376736 4.5e-06 56.6 102 41.2


User provided reference genes

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