Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 7.9e-135 483.8 249 100.0
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 3.4e-109 398.7 249 83.5
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 2.1e-103 379.4 249 79.5
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 6.8e-102 374.4 250 74.8
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 1.2e-101 373.6 250 76.0
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 7.5e-101 370.9 246 76.8
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 2.2e-100 369.4 247 76.9
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 5.4e-99 364.8 254 76.0
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 7.8e-98 360.9 253 75.1
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 1.3e-97 360.1 251 75.3
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 1.7e-97 359.8 249 76.3
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 1.7e-97 359.8 254 74.4
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 5.0e-97 358.2 251 75.3
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 6.6e-97 357.8 249 74.3
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 8.6e-97 357.5 254 73.2
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 4.3e-96 355.1 256 73.8
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 1.1e-94 350.5 250 73.6
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 1.4e-94 350.1 250 72.0
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 4.0e-94 348.6 251 71.7
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 3.7e-92 342.0 250 72.0
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 8.3e-92 340.9 250 70.8
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 8.3e-92 340.9 249 70.7
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 4.1e-91 338.6 256 70.3
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 2.0e-90 336.3 252 73.0
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 2.0e-90 336.3 281 66.9
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 4.6e-90 335.1 259 66.8
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 7.8e-90 334.3 251 70.1
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 3.0e-89 332.4 252 68.7
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 8.6e-89 330.9 252 69.4
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 1.5e-88 330.1 250 68.8
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 5.6e-88 328.2 253 70.0
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 3.6e-87 325.5 253 69.2
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 4.7e-87 325.1 251 68.9
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 6.2e-87 324.7 250 68.0
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 6.2e-87 324.7 250 68.0
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 8.1e-87 324.3 251 68.1
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 1.1e-86 323.9 254 68.9
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 1.1e-86 323.9 254 68.5
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 3.1e-86 322.4 249 69.1
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 3.1e-86 322.4 247 70.4
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 4.0e-86 322.0 248 69.4
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 6.8e-86 321.2 248 69.8
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 8.9e-86 320.9 230 70.9
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 2.0e-85 319.7 230 70.4
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 2.0e-85 319.7 244 70.1
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 3.4e-85 318.9 252 67.9
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 3.4e-85 318.9 251 67.7
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 4.4e-85 318.5 250 68.0
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 4.4e-85 318.5 265 65.7
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 5.8e-85 318.2 251 66.5
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 7.5e-85 317.8 251 67.3
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 1.3e-84 317.0 251 68.1
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 1.3e-84 317.0 245 70.2
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 3.7e-84 315.5 252 67.1
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 4.9e-84 315.1 252 68.3
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 8.3e-84 314.3 251 67.3
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 1.9e-83 313.2 253 66.4
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 2.4e-83 312.8 252 67.1
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 3.2e-83 312.4 245 67.3
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 7.1e-83 311.2 253 66.4
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 7.1e-83 311.2 245 68.2
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 9.2e-83 310.8 252 66.3
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 1.6e-82 310.1 251 66.5
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 2.1e-82 309.7 257 65.8
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 3.5e-82 308.9 254 65.4
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 4.6e-82 308.5 291 60.8
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 7.8e-82 307.8 251 65.3
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 2.3e-81 306.2 250 67.2
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 2.3e-81 306.2 252 65.1
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 4.3e-80 302.0 265 63.4
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 4.3e-80 302.0 265 63.4
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 1.6e-79 300.1 179 79.9
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 2.1e-79 299.7 212 72.2
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 2.8e-79 299.3 252 61.9
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 4.7e-79 298.5 212 72.6
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 1.1e-78 297.4 263 63.5
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 1.1e-78 297.4 177 81.9
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 3.1e-78 295.8 233 64.8
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 1.2e-77 293.9 248 63.3
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 1.5e-77 293.5 231 66.2
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 1.5e-77 293.5 234 67.1
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 5.8e-77 291.6 257 63.8
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 5.8e-77 291.6 233 64.4
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 7.6e-77 291.2 254 62.6
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 1.4e-75 287.0 190 72.6
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 2.7e-74 282.7 252 60.7
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 6.0e-74 281.6 240 61.7
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 1.7e-73 280.0 260 56.9
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 6.6e-73 278.1 279 60.2
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 1.1e-72 277.3 220 65.5
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 7.3e-72 274.6 251 57.0
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 9.6e-72 274.2 247 57.9
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 3.6e-71 272.3 254 59.1
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 9.0e-70 267.7 187 66.8
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 1.2e-69 267.3 257 58.4
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 1.5e-69 266.9 222 64.9
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 3.8e-68 262.3 236 61.9
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 5.4e-67 258.5 242 61.6
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 1.7e-65 253.4 145 84.8
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 6.6e-65 251.5 145 84.8
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 1.1e-64 250.8 242 57.9
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 2.5e-64 249.6 219 56.6
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 2.1e-58 229.9 211 62.1
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 3.1e-54 216.1 175 65.1
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 7.1e-51 204.9 239 53.6
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 2.1e-50 203.4 160 64.4
Glyma.20G231700 Glycine max HOM05D006710 ORTHO05D008353 7.9e-50 201.4 134 71.6
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 1.5e-45 187.2 216 44.0
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 1.1e-43 181.0 163 63.2
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 1.9e-43 180.3 170 50.0
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 1.3e-41 174.1 146 70.5
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 2.3e-41 173.3 229 40.2
Cc02_g32640 Coffea canephora HOM05D006710 ORTHO05D008353 5.7e-40 168.7 95 85.3
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 4.8e-39 165.6 200 44.0
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 2.9e-36 156.4 158 55.7
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 5.5e-35 152.1 136 64.7
EL10Ac7g17500 Beta vulgaris HOM05D006710 ORTHO05D008353 5.5e-27 125.6 96 63.5
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 6.7e-25 118.6 68 82.4
CBR_g32459 Chara braunii HOM05D000019 ORTHO05D000353 2.8e-15 86.7 217 28.6
MCO13G061 Micromonas commoda HOM05D006710 ORTHO05D008353 3.1e-14 83.2 132 33.3
Cre13.g564050 Chlamydomonas reinhardtii HOM05D006710 ORTHO05D008353 2.1e-10 70.5 139 29.5
Dinv22904 Davidia involucrata HOM05D006710 ORTHO05D008353 1.4e-06 57.8 62 45.2
HPP92_013649 Vanilla planifolia HOM05D006710 ORTHO05D008353 3.1e-06 56.6 35 74.3


User provided reference genes

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