Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40228 Davidia involucrata HOM05D000015 ORTHO05D035075 6.1e-42 173.7 87 100.0
Dinv19114 Davidia involucrata HOM05D000015 ORTHO05D003512 3.7e-39 164.5 82 98.8
Actinidia22868 Actinidia chinensis HOM05D000015 ORTHO05D003512 3.1e-25 118.2 71 74.6
CSS0030216 Camellia sinensis var. sinensis HOM05D000015 ORTHO05D003512 4.4e-24 114.4 71 77.5
CSS0044127 Camellia sinensis var. sinensis HOM05D000015 ORTHO05D003512 4.4e-24 114.4 71 77.5
Haze_03649 Corylus avellana HOM05D000015 ORTHO05D003512 2.2e-23 112.1 78 70.5
Dinv30408 Davidia involucrata HOM05D001995 ORTHO05D001952 1.4e-22 109.4 56 89.3
Cfa007120 Carpinus fangiana HOM05D000015 ORTHO05D003512 5.4e-22 107.5 78 67.9
Nitab4.5_0011544g0050 Nicotiana tabacum HOM05D000015 ORTHO05D003512 9.2e-22 106.7 75 64.0
Nitab4.5_0012518g0020 Nicotiana tabacum HOM05D000015 ORTHO05D003512 9.2e-22 106.7 71 64.8
Potri.001G455800 Populus trichocarpa HOM05D000015 ORTHO05D003512 1.6e-21 105.9 82 63.4
CAN.G883.24 Capsicum annuum HOM05D000015 ORTHO05D003512 3.5e-21 104.8 75 62.7
Phvul.002G119700 Phaseolus vulgaris HOM05D000015 ORTHO05D003512 3.5e-21 104.8 75 68.0
TAR376G0086 Trochodendron aralioides HOM05D000015 ORTHO05D003512 3.5e-21 104.8 75 70.7
Nn6g31588 Nelumbo nucifera HOM05D000015 ORTHO05D003512 4.6e-21 104.4 71 71.8
Prupe.7G188500 Prunus persica HOM05D000015 ORTHO05D003512 6.0e-21 104.0 70 68.6
FAN19G2626 Fragaria x ananassa HOM05D000015 ORTHO05D003512 7.8e-21 103.6 71 64.8
Sabra11G0131200 Salix brachista HOM05D000015 ORTHO05D003512 7.8e-21 103.6 79 60.8
FAN23G0680 Fragaria x ananassa HOM05D000015 ORTHO05D003512 1.0e-20 103.2 71 64.8
FAN26G2046 Fragaria x ananassa HOM05D000015 ORTHO05D003512 1.0e-20 103.2 71 64.8
RhsimUnG0112800 Rhododendron simsii HOM05D000015 ORTHO05D003512 1.0e-20 103.2 85 67.1
FvH4_1g09800 Fragaria vesca HOM05D000015 ORTHO05D003512 1.3e-20 102.8 71 64.8
RcHm_v2.0_Chr2g0096651 Rosa chinensis HOM05D000015 ORTHO05D003512 1.3e-20 102.8 71 63.4
MD15G1226700 Malus domestica HOM05D000015 ORTHO05D003512 2.3e-20 102.1 71 66.2
Potri.011G146300 Populus trichocarpa HOM05D000015 ORTHO05D003512 2.3e-20 102.1 82 62.2
FAN23G0183 Fragaria x ananassa HOM05D000015 ORTHO05D003512 3.0e-20 101.7 82 59.8
FAN28G0786 Fragaria x ananassa HOM05D000015 ORTHO05D003512 3.0e-20 101.7 71 63.4
Rhsim10G0190300 Rhododendron simsii HOM05D000015 ORTHO05D003512 3.0e-20 101.7 85 65.9
Sabra16G0308400 Salix brachista HOM05D000015 ORTHO05D003512 3.0e-20 101.7 82 61.0
GSVIVG01026420001 Vitis vinifera HOM05D000015 ORTHO05D003512 3.0e-20 101.7 82 65.9
vmacro20409 Vaccinium macrocarpon HOM05D000015 ORTHO05D003512 6.6e-20 100.5 84 66.7
VMungo1215G1965 Vigna mungo HOM05D000015 ORTHO05D003512 6.6e-20 100.5 68 69.1
Lalb_Chr05g0215001 Lupinus albus HOM05D000015 ORTHO05D003512 8.6e-20 100.1 82 57.3
MD02G1107500 Malus domestica HOM05D000015 ORTHO05D003512 1.9e-19 99.0 71 64.8
MSTRG.3651 Avicennia marina HOM05D000015 ORTHO05D003512 3.3e-19 98.2 70 72.9
Glyma.11G088900 Glycine max HOM05D000015 ORTHO05D003512 3.3e-19 98.2 81 60.5
Lalb_Chr16g0380251 Lupinus albus HOM05D000015 ORTHO05D003512 3.3e-19 98.2 82 54.9
Ca_22441_v3 Cicer arietinum L. HOM05D000015 ORTHO05D003512 4.3e-19 97.8 82 56.1
Ca_22448_v3 Cicer arietinum L. HOM05D000015 ORTHO05D003512 4.3e-19 97.8 82 56.1
Glyma.01G155900 Glycine max HOM05D000015 ORTHO05D003512 9.5e-19 96.7 75 61.3
SalBow5G2094 Salvia bowleyana HOM05D000015 ORTHO05D003512 1.2e-18 96.3 83 61.4
Glyma.09G195100 Glycine max HOM05D000015 ORTHO05D003512 1.6e-18 95.9 82 51.2
VMungo0251G1346 Vigna mungo HOM05D000015 ORTHO05D003512 2.1e-18 95.5 82 53.7
Ciclev10024941m.g Citrus clementina HOM05D000015 ORTHO05D003512 2.8e-18 95.1 71 66.2
Glyma.16G116000 Glycine max HOM05D000015 ORTHO05D003512 2.8e-18 95.1 82 52.4
Phvul.003G279300 Phaseolus vulgaris HOM05D000015 ORTHO05D003512 3.6e-18 94.7 82 53.7
Sopen02g017380 Solanum pennellii HOM05D000015 ORTHO05D003512 6.2e-18 94.0 75 60.0
Thecc.01G000900 Theobroma cacao HOM05D000015 ORTHO05D003512 8.1e-18 93.6 69 63.8
Solyc02g068280.4 Solanum lycopersicum HOM05D000015 ORTHO05D003512 1.1e-17 93.2 75 58.7
arahy.Tifrunner.gnm1.ann1.KJ02D9 Arachis hypogaea HOM05D000015 ORTHO05D003512 2.4e-17 92.0 75 54.7
arahy.Tifrunner.gnm1.ann1.RG5V6R Arachis hypogaea HOM05D000015 ORTHO05D003512 2.4e-17 92.0 75 54.7
TPR.G33756 Trifolium pratense HOM05D000015 ORTHO05D003512 2.4e-17 92.0 82 52.4
arahy.Tifrunner.gnm1.ann1.HV5BK9 Arachis hypogaea HOM05D000015 ORTHO05D003512 3.1e-17 91.7 75 57.3
Lalb_Chr09g0334471 Lupinus albus HOM05D000015 ORTHO05D003512 3.1e-17 91.7 82 50.0
Atru.chr3.8 Acer truncatum HOM05D000015 ORTHO05D003512 5.2e-17 90.9 74 58.1
CiPaw.03G212100 Carya illinoinensis HOM05D000015 ORTHO05D003512 6.8e-17 90.5 74 64.9
Ca_25040_v3 Cicer arietinum L. HOM05D000015 ORTHO05D003512 6.8e-17 90.5 82 52.4
Psat2g147120 Pisum sativum HOM05D000015 ORTHO05D003512 8.9e-17 90.1 68 58.8
MBI04_g11523_MAGBIO Magnolia biondii HOM05D000015 ORTHO05D003512 1.5e-16 89.4 76 61.8
Migut.G00785 Erythranthe guttata HOM05D000015 ORTHO05D003512 2.0e-16 89.0 70 61.4
Lj4g0007357 Lotus japonicus HOM05D000015 ORTHO05D003512 2.6e-16 88.6 83 53.0
PSO675G4372 Papaver somniferum HOM05D000015 ORTHO05D003512 2.6e-16 88.6 76 55.3
HanXRQChr15g0486421 Helianthus annuus HOM05D000015 ORTHO05D003512 3.4e-16 88.2 69 62.3
Medtr5g025010 Medicago truncatula HOM05D000015 ORTHO05D003512 3.4e-16 88.2 71 59.2
TPR.G14277 Trifolium pratense HOM05D000015 ORTHO05D003512 3.4e-16 88.2 73 56.2
Cc07_g12340 Coffea canephora HOM05D000015 ORTHO05D003512 4.4e-16 87.8 82 56.1
Psat0s3372g0040 Pisum sativum HOM05D000015 ORTHO05D003512 4.4e-16 87.8 68 60.3
Lsat_1_v5_gn_8_113680 Lactuca sativa HOM05D000015 ORTHO05D003512 5.8e-16 87.4 68 64.7
PSO541G3262 Papaver somniferum HOM05D000015 ORTHO05D003512 5.8e-16 87.4 76 55.3
Medtr8g072440 Medicago truncatula HOM05D000015 ORTHO05D003512 7.6e-16 87.0 84 51.2
QL06p053495 Quercus lobata HOM05D000015 ORTHO05D003512 7.6e-16 87.0 71 57.7
Eucgr.J02574 Eucalyptus grandis HOM05D000015 ORTHO05D003512 9.9e-16 86.7 83 51.8
PSO170G0864 Papaver somniferum HOM05D000015 ORTHO05D003512 3.8e-15 84.7 70 54.3
PGR102G0565 Punica granatum HOM05D000015 ORTHO05D003512 1.1e-14 83.2 67 55.2
Lj2g0014625 Lotus japonicus HOM05D000015 ORTHO05D003512 1.9e-14 82.4 76 52.6
PSO017G5125 Papaver somniferum HOM05D000015 ORTHO05D003512 2.4e-14 82.0 70 52.9
HanXRQChr14g0443741 Helianthus annuus HOM05D000015 ORTHO05D003512 3.2e-14 81.6 68 57.4
Lsat_1_v5_gn_2_72921 Lactuca sativa HOM05D000015 ORTHO05D003512 7.1e-14 80.5 83 53.0
Hma1.2p1_0085F.1_g044280 Hydrangea macrophylla HOM05D000015 ORTHO05D003512 4.6e-13 77.8 47 74.5
Lj4A245T47 Lonicera japonica HOM05D000015 ORTHO05D003512 1.3e-12 76.3 51 68.6
Oeu024784.1 Olea europaea HOM05D000015 ORTHO05D003512 3.0e-12 75.1 46 76.1
Manes.01G158500 Manihot esculenta HOM05D000015 ORTHO05D003512 8.7e-12 73.6 46 69.6
ECA238G2143 Erigeron canadensis HOM05D000015 ORTHO05D003512 1.5e-11 72.8 70 51.4
Aqoxy5G00948 Aquilegia oxysepala HOM05D000015 ORTHO05D003512 5.6e-11 70.9 54 63.0
PGSC0003DMG400009414 Solanum tuberosum HOM05D000015 ORTHO05D003512 1.3e-10 69.7 46 65.2
HPP92_021706 Vanilla planifolia HOM05D000015 ORTHO05D003512 3.1e-09 65.1 71 50.7
Os06g0624100 Oryza sativa ssp. japonica HOM05D000015 ORTHO05D003512 4.0e-09 64.7 54 55.6
MBI17_g03296_MAGBIO Magnolia biondii HOM05D000015 ORTHO05D035075 5.3e-09 64.3 46 67.4
arahy.Tifrunner.gnm1.ann1.95WSNN Arachis hypogaea HOM05D000015 ORTHO05D003512 9.9e-08 60.1 69 44.9
HPP92_021697 Vanilla planifolia HOM05D000015 ORTHO05D003512 1.4e-06 56.2 51 56.9
vmacro22054 Vaccinium macrocarpon HOM05D000724 ORTHO05D013379 9.3e-06 53.5 88 38.6


User provided reference genes

Program Settings