Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40131 Davidia involucrata HOM05D004723 ORTHO05D006176 2.0e-65 252.3 128 100.0
Lj4A224T28 Lonicera japonica HOM05D004723 ORTHO05D006176 8.8e-37 157.1 119 71.4
CSS0012813 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 2.2e-35 152.5 118 69.5
CSS0036730 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 2.2e-35 152.5 118 69.5
Ciclev10025027m.g Citrus clementina HOM05D004723 ORTHO05D006176 3.7e-35 151.8 116 68.1
Actinidia35669 Actinidia chinensis HOM05D004723 ORTHO05D006176 1.5e-33 146.4 121 64.5
Cpa.g.sc6.304 Carica papaya HOM05D004723 ORTHO05D006176 4.5e-33 144.8 119 64.7
Peaxi162Scf00198g00136 Petunia axillaris HOM05D004723 ORTHO05D006176 1.0e-32 143.7 121 63.6
Atru.chr3.886 Acer truncatum HOM05D004723 ORTHO05D006176 3.8e-32 141.7 117 65.0
Atru.chr3.897 Acer truncatum HOM05D004723 ORTHO05D006176 3.8e-32 141.7 117 65.0
Nn5g30820 Nelumbo nucifera HOM05D004723 ORTHO05D006176 8.5e-32 140.6 125 61.6
Potri.005G108800 Populus trichocarpa HOM05D004723 ORTHO05D006176 8.5e-32 140.6 117 66.7
Sopen02g028260 Solanum pennellii HOM05D004723 ORTHO05D006176 1.1e-31 140.2 118 65.3
Nitab4.5_0001789g0050 Nicotiana tabacum HOM05D004723 ORTHO05D006176 1.9e-31 139.4 119 63.9
vmacro18436 Vaccinium macrocarpon HOM05D004723 ORTHO05D006176 3.2e-31 138.7 128 60.2
GSVIVG01007226001 Vitis vinifera HOM05D004723 ORTHO05D006176 3.2e-31 138.7 120 63.3
Nitab4.5_0006899g0060 Nicotiana tabacum HOM05D004723 ORTHO05D006176 4.2e-31 138.3 119 63.9
PGSC0003DMG400003588 Solanum tuberosum HOM05D004723 ORTHO05D006176 5.5e-31 137.9 118 62.7
Solyc02g083470.3 Solanum lycopersicum HOM05D004723 ORTHO05D006176 7.2e-31 137.5 118 64.4
CAN.G890.41 Capsicum annuum HOM05D004723 ORTHO05D006176 1.2e-30 136.7 123 62.6
Sabra05G0089200 Salix brachista HOM05D004723 ORTHO05D006176 1.6e-30 136.3 120 63.3
Duzib147G1420 Durio zibethinus HOM05D004723 ORTHO05D006176 3.6e-30 135.2 118 62.7
COL.COLO4_33606 Corchorus olitorius HOM05D004723 ORTHO05D006176 5.1e-29 131.3 118 63.6
Eucgr.I02314 Eucalyptus grandis HOM05D004723 ORTHO05D006176 5.1e-29 131.3 115 61.7
Thecc.08G139800 Theobroma cacao HOM05D004723 ORTHO05D006176 8.8e-29 130.6 118 62.7
Manes.10G142700 Manihot esculenta HOM05D004723 ORTHO05D006176 3.3e-28 128.6 115 59.1
Aqoxy6G02087 Aquilegia oxysepala HOM05D004723 ORTHO05D006176 1.7e-27 126.3 118 58.5
QL06p051414 Quercus lobata HOM05D004723 ORTHO05D006176 1.7e-27 126.3 119 58.8
Thecc.01G155000 Theobroma cacao HOM05D004723 ORTHO05D006176 2.8e-27 125.6 118 61.0
TWI09G0244 Tripterygium wilfordii HOM05D004723 ORTHO05D006176 3.7e-27 125.2 118 56.8
MSTRG.10980 Avicennia marina HOM05D004723 ORTHO05D006176 1.4e-26 123.2 118 57.6
COL.COLO4_34179 Corchorus olitorius HOM05D004723 ORTHO05D006176 4.1e-26 121.7 118 60.2
Prupe.7G173800 Prunus persica HOM05D004723 ORTHO05D006176 4.1e-26 121.7 133 52.6
TAR628G1348 Trochodendron aralioides HOM05D004723 ORTHO05D006176 5.3e-26 121.3 94 70.2
Cc07_g11220 Coffea canephora HOM05D004723 ORTHO05D006176 7.0e-26 120.9 118 57.6
Gorai.012G044400 Gossypium raimondii HOM05D004723 ORTHO05D006176 7.0e-26 120.9 118 58.5
Oeu005338.2 Olea europaea HOM05D004723 ORTHO05D006176 9.1e-26 120.6 115 57.4
Gohir.A05G376600 Gossypium hirsutum HOM05D004723 ORTHO05D006176 1.2e-25 120.2 123 56.9
Oeu046870.1 Olea europaea HOM05D004723 ORTHO05D006176 2.0e-25 119.4 76 77.6
SGA_v2.0_scaffold111G31425 Striga asiatica HOM05D004723 ORTHO05D006176 2.0e-25 119.4 120 53.3
CiPaw.07G062200 Carya illinoinensis HOM05D004723 ORTHO05D006176 2.6e-25 119.0 119 54.6
Gohir.1Z049326 Gossypium hirsutum HOM05D004723 ORTHO05D006176 1.0e-24 117.1 118 57.6
Gohir.1Z049627 Gossypium hirsutum HOM05D004723 ORTHO05D006176 1.0e-24 117.1 118 57.6
AUR62003701 Chenopodium quinoa HOM05D004723 ORTHO05D006176 8.5e-24 114.0 118 53.4
MD15G1238600 Malus domestica HOM05D004723 ORTHO05D006176 8.5e-24 114.0 132 49.2
Cfa007019 Carpinus fangiana HOM05D004723 ORTHO05D006176 1.1e-23 113.6 119 55.5
ECA232G2222 Erigeron canadensis HOM05D004723 ORTHO05D006176 1.1e-23 113.6 92 64.1
Haze_03712 Corylus avellana HOM05D004723 ORTHO05D006176 1.5e-23 113.2 119 56.3
TAR628G0893 Trochodendron aralioides HOM05D004723 ORTHO05D006176 1.5e-23 113.2 78 74.4
HanXRQChr09g0257321 Helianthus annuus HOM05D004723 ORTHO05D006176 2.5e-23 112.5 117 54.7
Lsat_1_v5_gn_4_144101 Lactuca sativa HOM05D004723 ORTHO05D006176 3.2e-23 112.1 121 53.7
Phvul.003G266400 Phaseolus vulgaris HOM05D004723 ORTHO05D006176 9.4e-23 110.5 121 54.5
AUR62018009 Chenopodium quinoa HOM05D004723 ORTHO05D006176 1.2e-22 110.2 118 51.7
Ca_18264_v3 Cicer arietinum L. HOM05D004723 ORTHO05D006176 1.2e-22 110.2 122 54.9
MD02G1124600 Malus domestica HOM05D004723 ORTHO05D006176 1.6e-22 109.8 81 71.6
arahy.Tifrunner.gnm1.ann1.DG5MW5 Arachis hypogaea HOM05D004723 ORTHO05D006176 2.7e-22 109.0 120 55.8
PGR119G2074 Punica granatum HOM05D004723 ORTHO05D006176 2.7e-22 109.0 121 52.1
RcHm_v2.0_Chr2g0098611 Rosa chinensis HOM05D004723 ORTHO05D006176 2.7e-22 109.0 119 51.3
Migut.F01827 Erythranthe guttata HOM05D004723 ORTHO05D006176 3.6e-22 108.6 119 49.6
MELO3C006009.2 Cucumis melo HOM05D004723 ORTHO05D006176 4.7e-22 108.2 120 54.2
TPR.G4863 Trifolium pratense HOM05D004723 ORTHO05D006176 6.1e-22 107.8 122 54.9
VMungo0251G3240 Vigna mungo HOM05D004723 ORTHO05D006176 6.1e-22 107.8 121 54.5
arahy.Tifrunner.gnm1.ann1.7VD04T Arachis hypogaea HOM05D004723 ORTHO05D006176 8.0e-22 107.5 120 55.8
DCAR_024713 Daucus carota HOM05D004723 ORTHO05D006176 1.0e-21 107.1 120 55.0
unitig_22.g6210 Utricularia gibba HOM05D004119 ORTHO05D004797 1.0e-21 107.1 111 55.0
CsaV3_3G007910 Cucumis sativus L. HOM05D004723 ORTHO05D006176 1.4e-21 106.7 120 53.3
FvH4_1g11200 Fragaria vesca HOM05D004723 ORTHO05D006176 1.4e-21 106.7 121 52.1
FAN19G1371 Fragaria x ananassa HOM05D004723 ORTHO05D006176 1.4e-21 106.7 121 52.1
FAN23G0842 Fragaria x ananassa HOM05D004723 ORTHO05D006176 1.8e-21 106.3 121 52.1
Sc07g0001170 Simmondsia chinensis HOM05D004723 ORTHO05D006176 2.3e-21 105.9 117 53.8
FAN26G3228 Fragaria x ananassa HOM05D004723 ORTHO05D006176 6.7e-21 104.4 121 51.2
Lalb_Chr16g0391491 Lupinus albus HOM05D004723 ORTHO05D006176 1.1e-20 103.6 121 50.4
Ah.01g003790 Amaranthus hybridus HOM05D004723 ORTHO05D006176 2.0e-20 102.8 116 51.7
Glyma.02G045200 Glycine max HOM05D004723 ORTHO05D006176 2.0e-20 102.8 119 53.8
Glyma.16G122800 Glycine max HOM05D004723 ORTHO05D006176 2.0e-20 102.8 121 54.5
EL10Ac6g15170 Beta vulgaris HOM05D004723 ORTHO05D006176 2.6e-20 102.4 118 54.2
PSO675G8954 Papaver somniferum HOM05D004723 ORTHO05D006176 2.6e-20 102.4 126 50.8
THA.LOC104821168 Tarenaya hassleriana HOM05D004723 ORTHO05D006176 3.3e-20 102.1 116 55.2
ClCG05G000690 Citrullus lanatus HOM05D004723 ORTHO05D006176 4.4e-20 101.7 120 52.5
Lj4g0028127 Lotus japonicus HOM05D004723 ORTHO05D006176 5.7e-20 101.3 119 50.4
Medtr4g096820 Medicago truncatula HOM05D004723 ORTHO05D006176 5.7e-20 101.3 118 54.2
Sed0008382 Sechium edule HOM05D004723 ORTHO05D006176 1.3e-19 100.1 120 53.3
Psat7g090000 Pisum sativum HOM05D004723 ORTHO05D006176 1.7e-19 99.8 119 50.4
Rhsim08G0030900 Rhododendron simsii HOM05D004723 ORTHO05D006176 1.7e-19 99.8 129 51.2
PSO541G1155 Papaver somniferum HOM05D004723 ORTHO05D006176 6.3e-19 97.8 125 49.6
CDE05G0343 Ceratophyllum demersum HOM05D004723 ORTHO05D006176 1.4e-18 96.7 123 45.5
AT3G01160 Arabidopsis thaliana HOM05D004723 ORTHO05D006176 3.1e-18 95.5 115 54.8
SEGI_08029 Sequoiadendron giganteum HOM05D004723 ORTHO05D006176 1.2e-17 93.6 116 47.4
Medtr4g073330 Medicago truncatula HOM05D004723 ORTHO05D006176 1.6e-17 93.2 128 46.1
Aa31LG5G12460 Aethionema arabicum HOM05D004723 ORTHO05D006176 5.9e-17 91.3 117 52.1
AL3G11100 Arabidopsis lyrata HOM05D004723 ORTHO05D006176 7.7e-17 90.9 69 71.0
Hund14070 Selenicereus undatus HOM05D004723 ORTHO05D006176 1.3e-16 90.1 104 51.9
CARHR075890 Cardamine hirsuta HOM05D004723 ORTHO05D006176 1.5e-15 86.7 115 51.3
HPP92_019124 Vanilla planifolia HOM05D004723 ORTHO05D006176 3.2e-15 85.5 66 63.6
Medtr3g107350 Medicago truncatula HOM05D004723 ORTHO05D006176 7.2e-15 84.3 129 45.7
ATR0665G361 Amborella trichopoda HOM05D004723 ORTHO05D006176 1.2e-14 83.6 103 48.5
Carub.0003s0100 Capsella rubella HOM05D004723 ORTHO05D006176 2.3e-13 79.3 115 48.7
Zm00001eb323180 Zea mays HOM05D004723 ORTHO05D006176 3.0e-13 79.0 114 46.5
BcaC05g30489 Brassica carinata HOM05D004723 ORTHO05D006176 6.8e-13 77.8 74 58.1
Os07g0531700 Oryza sativa ssp. japonica HOM05D004723 ORTHO05D006176 1.2e-12 77.0 112 46.4
SHI00027 Sapria himalayana HOM05D004723 ORTHO05D006176 4.4e-12 75.1 60 60.0
C09p75390 Brassica napus HOM05D004723 ORTHO05D006176 9.8e-12 73.9 69 60.9
CANSAT25G3056 Cannabis sativa HOM05D004723 ORTHO05D006176 9.8e-12 73.9 117 47.0
Sp3g00960 Schrenkiella parvula HOM05D004723 ORTHO05D006176 1.3e-11 73.6 111 44.1
BolC5t35121H Brassica oleracea HOM05D004723 ORTHO05D006176 1.7e-11 73.2 69 60.9
BcaC05g30387 Brassica carinata HOM05D004723 ORTHO05D006176 2.2e-11 72.8 69 58.0
BcaC01g04506 Brassica carinata HOM05D004723 ORTHO05D006176 8.3e-11 70.9 119 44.5
Thhalv10020182m.g Eutrema salsugineum HOM05D004723 ORTHO05D006176 1.8e-10 69.7 111 45.0
A05p44800 Brassica napus HOM05D004723 ORTHO05D006176 4.1e-10 68.6 69 58.0
BraA05t23177Z Brassica rapa HOM05D004723 ORTHO05D006176 1.2e-09 67.0 110 42.7
CBR_g41392 Chara braunii HOM05D004723 ORTHO05D006176 5.9e-09 64.7 101 41.6
Actinidia28727 Actinidia chinensis HOM05D004723 ORTHO05D006176 2.2e-08 62.8 44 70.5
SMO232G0062 Selaginella moellendorffii HOM05D004723 ORTHO05D006176 3.8e-08 62.0 58 53.4
SMO239G0207 Selaginella moellendorffii HOM05D004723 ORTHO05D006176 3.8e-08 62.0 58 53.4
Pp3c17_7210 Physcomitrium patens HOM05D004723 ORTHO05D006176 6.5e-08 61.2 74 43.2
AagrBONN_evm.TU.Sc2ySwM_117.2822 Anthoceros agrestis HOM05D004723 ORTHO05D006176 2.1e-06 56.2 77 41.6
AagrBONN_evm.TU.Sc2ySwM_368.2747 Anthoceros agrestis HOM05D004723 ORTHO05D006176 2.1e-06 56.2 77 41.6
C03p39780 Brassica napus HOM05D004723 ORTHO05D019910 3.6e-06 55.5 74 40.5
BcaC01g04505 Brassica carinata HOM05D004723 ORTHO05D019910 6.1e-06 54.7 101 39.6
Mapoly0061s0018 Marchantia polymorpha HOM05D004723 ORTHO05D006176 8.0e-06 54.3 82 40.2


User provided reference genes

Program Settings