Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv40087 Davidia involucrata HOM05D003676 ORTHO05D004262 5.0e-191 671.0 357 100.0
Dinv33627 Davidia involucrata HOM05D003676 ORTHO05D004262 7.4e-118 427.9 370 70.8
Hma1.2p1_0956F.1_g241320 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 4.1e-108 395.6 394 64.5
CSS0018215 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 5.3e-108 395.2 374 67.1
CSS0021991 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 1.7e-106 390.2 377 65.8
CSS0022685 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 1.7e-106 390.2 378 66.4
vmacro18414 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 1.4e-103 380.6 379 66.0
Hma1.2p1_0258F.1_g104145 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 1.8e-103 380.2 448 57.4
Lj2A468T73 Lonicera japonica HOM05D003676 ORTHO05D004262 2.0e-102 376.7 374 63.9
Cc07_g10720 Coffea canephora HOM05D003676 ORTHO05D004262 2.6e-102 376.3 386 62.7
QL06p032755 Quercus lobata HOM05D003676 ORTHO05D004262 6.3e-101 371.7 381 62.2
Actinidia17444 Actinidia chinensis HOM05D003676 ORTHO05D004262 1.8e-100 370.2 372 63.7
Solyc02g083890.4 Solanum lycopersicum HOM05D003676 ORTHO05D004262 1.0e-95 354.4 372 62.4
Sopen02g028680 Solanum pennellii HOM05D003676 ORTHO05D004262 6.8e-95 351.7 376 62.0
CiPaw.07G058500 Carya illinoinensis HOM05D003676 ORTHO05D004262 4.8e-93 345.5 380 60.0
Manes.01G145700 Manihot esculenta HOM05D003676 ORTHO05D004262 1.1e-92 344.4 363 61.7
Nitab4.5_0003382g0020 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.8e-92 343.6 366 62.6
Rhsim10G0212200 Rhododendron simsii HOM05D003676 ORTHO05D004262 2.4e-92 343.2 379 59.6
Potri.005G114100 Populus trichocarpa HOM05D003676 ORTHO05D004262 4.1e-92 342.4 383 61.4
Peaxi162Scf00083g00320 Petunia axillaris HOM05D003676 ORTHO05D004262 5.4e-92 342.0 370 60.8
Nitab4.5_0005660g0010 Nicotiana tabacum HOM05D003676 ORTHO05D004262 2.0e-91 340.1 364 60.4
Sabra05G0093400 Salix brachista HOM05D003676 ORTHO05D004262 4.5e-91 339.0 381 59.3
TAR376G0994 Trochodendron aralioides HOM05D003676 ORTHO05D004262 7.7e-91 338.2 362 61.3
MD02G1132500 Malus domestica HOM05D003676 ORTHO05D004262 1.7e-90 337.0 379 57.5
Actinidia30997 Actinidia chinensis HOM05D003676 ORTHO05D004262 3.8e-90 335.9 363 60.9
Ciclev10025949m.g Citrus clementina HOM05D003676 ORTHO05D004262 2.5e-89 333.2 371 60.9
Rhsim08G0033700 Rhododendron simsii HOM05D003676 ORTHO05D004262 2.5e-89 333.2 380 61.1
TAR381G0332 Trochodendron aralioides HOM05D003676 ORTHO05D004262 2.5e-89 333.2 368 60.6
DCAR_016607 Daucus carota HOM05D003676 ORTHO05D004262 9.5e-89 331.3 367 57.2
Nn5g30150 Nelumbo nucifera HOM05D003676 ORTHO05D004262 1.2e-88 330.9 389 59.6
Duzib187G0981 Durio zibethinus HOM05D003676 ORTHO05D004262 2.1e-88 330.1 377 60.5
MD15G1246000 Malus domestica HOM05D003676 ORTHO05D004262 2.8e-88 329.7 367 58.9
PGSC0003DMG400003640 Solanum tuberosum HOM05D003676 ORTHO05D004262 1.4e-87 327.4 370 59.2
Prupe.7G168100 Prunus persica HOM05D003676 ORTHO05D004262 1.8e-87 327.0 379 56.5
Thecc.01G019000 Theobroma cacao HOM05D003676 ORTHO05D004262 2.6e-86 323.2 374 58.8
Lalb_Chr05g0212401 Lupinus albus HOM05D003676 ORTHO05D004262 5.7e-86 322.0 360 58.1
RcHm_v2.0_Chr2g0099451 Rosa chinensis HOM05D003676 ORTHO05D004262 1.7e-85 320.5 377 56.5
arahy.Tifrunner.gnm1.ann1.CCI0LY Arachis hypogaea HOM05D003676 ORTHO05D004262 4.9e-85 318.9 373 57.9
arahy.Tifrunner.gnm1.ann1.3LB61T Arachis hypogaea HOM05D003676 ORTHO05D004262 1.4e-84 317.4 372 57.8
CAN.G1671.14 Capsicum annuum HOM05D003676 ORTHO05D004262 1.4e-84 317.4 381 57.7
Cfa006972 Carpinus fangiana HOM05D003676 ORTHO05D004262 4.1e-84 315.8 381 57.7
TAR628G0168 Trochodendron aralioides HOM05D003676 ORTHO05D004262 1.7e-82 310.5 365 58.6
MSTRG.2714 Avicennia marina HOM05D003676 ORTHO05D004262 2.9e-82 309.7 382 55.2
Lj4g0000664 Lotus japonicus HOM05D003676 ORTHO05D004262 2.9e-82 309.7 370 55.7
Hund16490 Selenicereus undatus HOM05D003676 ORTHO05D004262 6.6e-82 308.5 392 54.1
Atru.chr3.798 Acer truncatum HOM05D003676 ORTHO05D004262 4.3e-81 305.8 385 57.4
Actinidia22976 Actinidia chinensis HOM05D003676 ORTHO05D004262 8.0e-80 301.6 289 66.8
Eucgr.I02350 Eucalyptus grandis HOM05D003676 ORTHO05D004262 1.4e-79 300.8 375 54.7
Duzib264G0036 Durio zibethinus HOM05D003676 ORTHO05D004262 5.2e-79 298.9 376 56.4
MELO3C013767.2 Cucumis melo HOM05D003676 ORTHO05D004262 1.2e-78 297.7 396 53.0
Hund14045 Selenicereus undatus HOM05D003676 ORTHO05D004262 2.0e-78 297.0 374 54.5
Lj4A218T52 Lonicera japonica HOM05D003676 ORTHO05D004262 9.8e-78 294.7 366 54.9
MBI05_g37447_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 9.8e-78 294.7 362 53.9
Cpa.g.sc6.251 Carica papaya HOM05D003676 ORTHO05D004262 1.3e-77 294.3 380 53.9
Oeu012589.1 Olea europaea HOM05D003676 ORTHO05D004262 1.1e-76 291.2 352 55.4
Oeu063192.2 Olea europaea HOM05D003676 ORTHO05D004262 2.4e-76 290.0 342 57.3
ClCG10G000750 Citrullus lanatus HOM05D003676 ORTHO05D004262 1.6e-75 287.3 380 52.1
FAN26G1220 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.6e-75 287.3 372 55.1
TPR.G30058 Trifolium pratense HOM05D003676 ORTHO05D004262 2.0e-75 287.0 360 53.1
Psat4g099080 Pisum sativum HOM05D003676 ORTHO05D004262 4.6e-75 285.8 368 52.4
FvH4_1g11840 Fragaria vesca HOM05D003676 ORTHO05D004262 5.9e-75 285.4 393 52.7
Manes.02G104500 Manihot esculenta HOM05D003676 ORTHO05D004262 7.8e-75 285.0 338 57.7
CANSAT01G0038 Cannabis sativa HOM05D003676 ORTHO05D004262 3.9e-74 282.7 383 52.5
CsaV3_3G000800 Cucumis sativus L. HOM05D003676 ORTHO05D004262 5.0e-74 282.3 385 51.9
FAN23G0443 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.9e-73 280.4 373 53.9
FAN19G1818 Fragaria x ananassa HOM05D003676 ORTHO05D004262 2.5e-73 280.0 382 52.6
Nn1g05889 Nelumbo nucifera HOM05D003676 ORTHO05D004262 4.3e-73 279.3 360 55.0
Glyma.16G128800 Glycine max HOM05D003676 ORTHO05D004262 2.8e-72 276.6 374 55.9
PGR119G1864 Punica granatum HOM05D003676 ORTHO05D004262 1.4e-71 274.2 392 51.8
Glyma.01G166300 Glycine max HOM05D003676 ORTHO05D004262 1.8e-71 273.9 375 54.4
Gohir.A11G175400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 2.3e-71 273.5 371 52.8
Sed0017342 Sechium edule HOM05D003676 ORTHO05D004262 4.0e-71 272.7 381 52.5
Oeu048461.1 Olea europaea HOM05D003676 ORTHO05D004262 5.2e-71 272.3 340 55.3
VMungo0251G0225 Vigna mungo HOM05D003676 ORTHO05D004262 8.9e-71 271.6 378 55.3
Medtr8g075950 Medicago truncatula HOM05D003676 ORTHO05D004262 1.3e-69 267.7 364 51.1
PSO675G7127 Papaver somniferum HOM05D003676 ORTHO05D004262 4.9e-69 265.8 370 53.2
TWI09G1351 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 6.4e-69 265.4 361 52.9
Phvul.003G262100 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 1.4e-68 264.2 361 55.1
AUR62029464 Chenopodium quinoa HOM05D003676 ORTHO05D004262 5.4e-68 262.3 348 53.4
PSO541G5658 Papaver somniferum HOM05D003676 ORTHO05D004262 1.2e-67 261.2 366 53.0
Gorai.007G194900 Gossypium raimondii HOM05D003676 ORTHO05D004262 2.7e-67 260.0 364 51.6
AT5G66230 Arabidopsis thaliana HOM05D003676 ORTHO05D003783 3.5e-67 259.6 360 51.7
Glyma.02G048700 Glycine max HOM05D003676 ORTHO05D004262 6.0e-67 258.8 386 52.3
SalBow3G1193 Salvia bowleyana HOM05D003676 ORTHO05D004262 6.0e-67 258.8 350 53.4
COL.COLO4_21910 Corchorus olitorius HOM05D003676 ORTHO05D004262 1.0e-66 258.1 382 51.3
GSVIVG01018782001 Vitis vinifera HOM05D003676 ORTHO05D004262 3.0e-66 256.5 252 63.5
Aa31LG1G14730 Aethionema arabicum HOM05D003676 ORTHO05D004262 3.9e-66 256.1 357 49.0
CARHR281500 Cardamine hirsuta HOM05D003676 ORTHO05D004262 8.6e-66 255.0 360 52.5
Gohir.D11G182900 Gossypium hirsutum HOM05D003676 ORTHO05D004262 2.5e-65 253.4 412 48.1
FAN28G1902 Fragaria x ananassa HOM05D003676 ORTHO05D004262 2.8e-64 250.0 371 50.9
Ca_22374_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 4.7e-64 249.2 361 50.4
ECA232G1625 Erigeron canadensis HOM05D003676 ORTHO05D004262 1.8e-63 247.3 365 48.2
MBI05_g30743_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 1.8e-63 247.3 361 49.0
Gorai.008G063100 Gossypium raimondii HOM05D003676 ORTHO05D004262 3.1e-63 246.5 359 49.9
Carub.0008s2827 Capsella rubella HOM05D003676 ORTHO05D004262 5.2e-63 245.7 363 51.2
Glyma.11G077200 Glycine max HOM05D003676 ORTHO05D004262 5.2e-63 245.7 378 51.3
Gohir.A12G059600 Gossypium hirsutum HOM05D003676 ORTHO05D004262 2.0e-62 243.8 363 49.3
Gohir.D12G060000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 7.5e-62 241.9 360 49.4
Thhalv10004614m.g Eutrema salsugineum HOM05D003676 ORTHO05D004262 1.3e-61 241.1 361 48.5
Ca_25824_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 3.7e-61 239.6 369 50.4
SGA_v2.0_scaffold78G25382 Striga asiatica HOM05D003676 ORTHO05D004262 1.9e-60 237.3 365 48.8
TWI53G0168 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 4.6e-59 232.6 389 47.6
THA.LOC104819178 Tarenaya hassleriana HOM05D003676 ORTHO05D004262 1.7e-58 230.7 369 47.2
Aqoxy6G02292 Aquilegia oxysepala HOM05D003676 ORTHO05D004262 6.2e-56 222.2 372 48.9
A09p10110 Brassica napus HOM05D003676 ORTHO05D004262 8.1e-56 221.9 364 47.0
Gohir.A02G170700 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.1e-55 221.5 342 48.8
Gohir.D03G009400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.4e-55 221.1 343 48.7
Sc07g0000980 Simmondsia chinensis HOM05D003676 ORTHO05D004262 1.4e-55 221.1 329 48.6
AUR62003369 Chenopodium quinoa HOM05D003676 ORTHO05D004262 1.8e-55 220.7 374 46.0
C09p11980 Brassica napus HOM05D003676 ORTHO05D004262 2.3e-55 220.3 363 45.2
Gorai.003G009600 Gossypium raimondii HOM05D003676 ORTHO05D004262 2.3e-55 220.3 348 48.9
BraA09t36654Z Brassica rapa HOM05D003676 ORTHO05D004262 5.2e-55 219.2 364 46.7
Gohir.D11G183000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 8.9e-55 218.4 325 53.2
BolC9t54086H Brassica oleracea HOM05D003676 ORTHO05D004262 4.4e-54 216.1 369 44.7
Nn1g05888 Nelumbo nucifera HOM05D003676 ORTHO05D004262 4.4e-54 216.1 365 44.1
HanXRQChr09g0256601 Helianthus annuus HOM05D003676 ORTHO05D004262 7.6e-54 215.3 333 45.9
Potri.007G057800 Populus trichocarpa HOM05D003676 ORTHO05D004262 9.9e-54 214.9 384 46.4
Lsat_1_v5_gn_4_146360 Lactuca sativa HOM05D003676 ORTHO05D004262 1.7e-53 214.2 324 47.2
Gorai.007G195000 Gossypium raimondii HOM05D003676 ORTHO05D004262 3.8e-53 213.0 333 51.1
Sp2g30470 Schrenkiella parvula HOM05D003676 ORTHO05D004262 1.6e-51 207.6 362 45.3
HanXRQChr15g0487251 Helianthus annuus HOM05D003676 ORTHO05D004262 6.6e-50 202.2 336 45.8
Medtr5g022010 Medicago truncatula HOM05D003676 ORTHO05D004262 6.6e-50 202.2 356 45.8
Ah.03g148760 Amaranthus hybridus HOM05D003676 ORTHO05D004262 1.1e-49 201.4 334 44.9
unitig_736.g22721 Utricularia gibba HOM05D003676 ORTHO05D004262 1.9e-49 200.7 348 45.4
Haze_03763 Corylus avellana HOM05D003676 ORTHO05D004262 7.3e-49 198.7 187 69.5
Sc16g0002190 Simmondsia chinensis HOM05D003676 ORTHO05D004262 4.7e-48 196.1 367 42.5
Phvul.002G108800 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 8.1e-48 195.3 349 46.4
HPP92_020902 Vanilla planifolia HOM05D003676 ORTHO05D004262 8.1e-48 195.3 371 43.1
unitig_899.g14713 Utricularia gibba HOM05D003676 ORTHO05D004262 3.1e-47 193.4 313 46.6
AL5G31630 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 9.0e-47 191.8 363 42.4
TPR.G18183 Trifolium pratense HOM05D003676 ORTHO05D004262 1.7e-45 187.6 367 44.4
AL8G45300 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 4.9e-45 186.0 236 56.8
Lsat_1_v5_gn_3_74521 Lactuca sativa HOM05D003676 ORTHO05D004262 3.2e-44 183.3 332 45.5
Sp5g10990 Schrenkiella parvula HOM05D003676 ORTHO05D004262 4.2e-44 183.0 364 42.0
Lalb_Chr09g0321731 Lupinus albus HOM05D003676 ORTHO05D004262 7.1e-44 182.2 359 43.2
CDE05G2608 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 8.7e-42 175.3 353 42.2
Psat2g154560 Pisum sativum HOM05D003676 ORTHO05D004262 1.3e-40 171.4 361 42.1
SHI32179 Sapria himalayana HOM05D003676 ORTHO05D004262 9.0e-39 165.2 338 39.1
ECA246G1385 Erigeron canadensis HOM05D003676 ORTHO05D004262 6.4e-37 159.1 288 45.1
SEGI_21114 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 4.2e-36 156.4 332 38.6
SEGI_09532 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 3.5e-35 153.3 381 35.7
DCAR_025998 Daucus carota HOM05D003676 ORTHO05D004262 6.0e-35 152.5 241 47.7
PGSC0003DMG400023891 Solanum tuberosum HOM05D003676 ORTHO05D004262 6.0e-35 152.5 331 42.3
Migut.H01153 Erythranthe guttata HOM05D003676 ORTHO05D004262 1.8e-34 151.0 332 42.8
BcaNung00393 Brassica carinata HOM05D003676 ORTHO05D004262 1.1e-33 148.3 318 39.9
Carub.0005s1760 Capsella rubella HOM05D003676 ORTHO05D004262 1.1e-33 148.3 354 37.9
Zm00001eb224920 Zea mays HOM05D003676 ORTHO05D004262 1.5e-33 147.9 386 36.3
CDE05G0776 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 3.3e-33 146.7 289 45.3
Os10g0577400 Oryza sativa ssp. japonica HOM05D003676 ORTHO05D004262 5.6e-33 146.0 382 35.9
BcaNung04494 Brassica carinata HOM05D003676 ORTHO05D004262 1.6e-32 144.4 261 41.0
AT3G51230 Arabidopsis thaliana HOM05D003676 ORTHO05D004262 1.1e-31 141.7 215 47.9
Nitab4.5_0002337g0030 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.1e-31 141.7 325 39.4
A01p23560 Brassica napus HOM05D003676 ORTHO05D004262 3.1e-31 140.2 319 37.3
BraA01t02262Z Brassica rapa HOM05D003676 ORTHO05D004262 3.1e-31 140.2 319 37.3
vmacro23249 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 6.9e-31 139.0 336 41.7
vmacro23473 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 6.9e-31 139.0 336 41.7
Zm00001eb024930 Zea mays HOM05D003676 ORTHO05D004262 9.0e-31 138.7 365 36.4
Nitab4.5_0000188g0110 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.2e-30 138.3 216 54.2
BcaC09g50089 Brassica carinata HOM05D003676 ORTHO05D004262 1.5e-30 137.9 221 47.5
C01p29220 Brassica napus HOM05D003676 ORTHO05D004262 1.5e-30 137.9 221 47.5
Solyc02g062170.3 Solanum lycopersicum HOM05D003676 ORTHO05D004262 2.0e-30 137.5 303 39.6
Sopen02g013140 Solanum pennellii HOM05D003676 ORTHO05D004262 2.6e-30 137.1 303 39.9
ATR0149G006 Amborella trichopoda HOM05D003676 ORTHO05D004262 2.9e-29 133.7 385 35.8
Atru.chr1.3640 Acer truncatum HOM05D003676 ORTHO05D004262 6.4e-29 132.5 131 68.7
CARHR160810 Cardamine hirsuta HOM05D003676 ORTHO05D004262 8.4e-29 132.1 220 44.5
RcHm_v2.0_Chr6g0272671 Rosa chinensis HOM05D003676 ORTHO05D004262 7.4e-25 119.0 132 55.3
Atru.chr1.3647 Acer truncatum HOM05D003676 ORTHO05D004262 3.7e-24 116.7 367 36.8
Gorai.010G060700 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.8e-23 114.4 210 47.1
HanXRQChr16g0531461 Helianthus annuus HOM05D003676 ORTHO05D004262 8.4e-21 105.5 234 38.5
vmacro22131 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 1.1e-20 105.1 357 35.6
SEGI_24904 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 1.6e-16 91.3 292 36.0
Mapoly0004s0127 Marchantia polymorpha HOM05D003676 ORTHO05D030105 4.6e-11 73.2 421 30.2
Gohir.D09G239350 Gossypium hirsutum HOM05D003676 ORTHO05D004262 2.3e-10 70.9 58 65.5
Gorai.006G262100 Gossypium raimondii HOM05D003676 ORTHO05D004262 5.1e-10 69.7 58 63.8
Nn8g38913 Nelumbo nucifera HOM05D003676 ORTHO05D004262 2.5e-09 67.4 67 52.2
SMO340G0107 Selaginella moellendorffii HOM05D003676 ORTHO05D004262 2.5e-09 67.4 315 29.2
PSO700G0244 Papaver somniferum HOM05D065651 ORTHO05D004262 1.8e-07 61.2 254 32.7
TAR629G3197 Trochodendron aralioides HOM05D003676 ORTHO05D004262 9.1e-07 58.9 107 43.9
Nn1g06616 Nelumbo nucifera HOM05D003676 ORTHO05D004262 1.2e-06 58.5 122 42.6
SalBow1G4548 Salvia bowleyana HOM05D004561 ORTHO05D005315 2.6e-06 57.4 31 93.5
PSO170G2947 Papaver somniferum HOM05D065651 ORTHO05D004262 7.7e-06 55.8 251 32.3


User provided reference genes

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