Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39998 Davidia involucrata HOM05D004708 ORTHO05D005573 6.6e-79 297.4 156 100.0
Dinv13509 Davidia involucrata HOM05D004708 ORTHO05D005573 4.3e-62 241.5 170 77.6
Actinidia19193 Actinidia chinensis HOM05D004708 ORTHO05D005573 9.9e-59 230.3 170 72.9
vmacro17822 Vaccinium macrocarpon HOM05D004708 ORTHO05D005573 6.4e-58 227.6 170 73.5
Hma1.2p1_0224F.1_g094553 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 5.4e-57 224.6 166 72.3
CSS0040556 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 7.1e-57 224.2 175 69.1
Cpa.g.sc6.137 Carica papaya HOM05D004708 ORTHO05D005573 2.7e-56 222.2 176 69.3
Rhsim08G0118600 Rhododendron simsii HOM05D004708 ORTHO05D005573 3.5e-56 221.9 170 71.8
MSTRG.23511 Avicennia marina HOM05D004708 ORTHO05D005573 2.3e-55 219.2 170 67.6
CSS0030971 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 3.9e-55 218.4 170 70.0
Hund16439 Selenicereus undatus HOM05D004708 ORTHO05D005573 3.9e-55 218.4 178 64.6
GSVIVG01018936001 Vitis vinifera HOM05D004708 ORTHO05D005573 3.9e-55 218.4 168 69.0
Cc07_g09720 Coffea canephora HOM05D004708 ORTHO05D005573 2.5e-54 215.7 173 66.5
QL06p046600 Quercus lobata HOM05D004708 ORTHO05D005573 5.6e-54 214.5 168 69.6
Sopen02g013670 Solanum pennellii HOM05D004708 ORTHO05D005573 7.4e-54 214.2 171 68.4
TWI53G1618 Tripterygium wilfordii HOM05D004708 ORTHO05D005573 7.4e-54 214.2 171 67.8
Ciclev10026600m.g Citrus clementina HOM05D004708 ORTHO05D005573 1.3e-53 213.4 174 66.7
Nitab4.5_0000136g0310 Nicotiana tabacum HOM05D004708 ORTHO05D005573 1.3e-53 213.4 171 67.8
Peaxi162Scf00008g03516 Petunia axillaris HOM05D004708 ORTHO05D005573 1.3e-53 213.4 171 67.3
Prupe.7G156900 Prunus persica HOM05D004708 ORTHO05D005573 2.1e-53 212.6 174 67.8
Thecc.03G010200 Theobroma cacao HOM05D004708 ORTHO05D005573 2.8e-53 212.2 177 66.1
Solyc02g062640.4 Solanum lycopersicum HOM05D004708 ORTHO05D005573 3.7e-53 211.8 170 68.2
Hma1.2p1_0789F.1_g218250 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 4.8e-53 211.5 178 66.3
SalBow6G2211 Salvia bowleyana HOM05D004708 ORTHO05D005573 6.2e-53 211.1 169 66.3
HanXRQChr09g0261341 Helianthus annuus HOM05D004708 ORTHO05D005573 8.1e-53 210.7 176 65.9
GSVIVG01025946001 Vitis vinifera HOM05D004708 ORTHO05D005573 8.1e-53 210.7 170 65.9
MD02G1144700 Malus domestica HOM05D004708 ORTHO05D005573 1.1e-52 210.3 174 67.2
COL.COLO4_34048 Corchorus olitorius HOM05D004708 ORTHO05D005573 1.4e-52 209.9 177 65.0
Atru.chr3.607 Acer truncatum HOM05D004708 ORTHO05D005573 1.8e-52 209.5 169 67.5
Manes.01G136850 Manihot esculenta HOM05D004708 ORTHO05D005573 1.8e-52 209.5 170 65.9
CAN.G111.48 Capsicum annuum HOM05D004708 ORTHO05D005573 3.1e-52 208.8 169 68.0
Gohir.A09G170800 Gossypium hirsutum HOM05D004708 ORTHO05D005573 3.1e-52 208.8 169 67.5
Sc16g0002660 Simmondsia chinensis HOM05D004708 ORTHO05D005573 3.1e-52 208.8 177 63.8
MD15G1258400 Malus domestica HOM05D004708 ORTHO05D005573 6.9e-52 207.6 177 65.0
Duzib084G0089 Durio zibethinus HOM05D004708 ORTHO05D005573 9.0e-52 207.2 174 64.4
Gorai.006G188300 Gossypium raimondii HOM05D004708 ORTHO05D005573 9.0e-52 207.2 169 66.3
ECA232G2192 Erigeron canadensis HOM05D004708 ORTHO05D005573 1.2e-51 206.8 176 65.9
PGSC0003DMG400015508 Solanum tuberosum HOM05D004708 ORTHO05D005573 1.2e-51 206.8 164 68.3
AUR62004070 Chenopodium quinoa HOM05D004708 ORTHO05D005573 1.5e-51 206.5 160 67.5
Lsat_1_v5_gn_4_148240 Lactuca sativa HOM05D004708 ORTHO05D005573 3.4e-51 205.3 175 63.4
ClCG05G006010 Citrullus lanatus HOM05D000319 ORTHO05D000903 5.8e-51 204.5 169 65.1
EL10Ac6g15543 Beta vulgaris HOM05D004708 ORTHO05D005573 7.6e-51 204.1 174 64.4
DCAR_032374 Daucus carota HOM05D004708 ORTHO05D005573 7.6e-51 204.1 169 65.7
Migut.H00962 Erythranthe guttata HOM05D004708 ORTHO05D005573 9.9e-51 203.8 172 66.3
Gorai.008G067200 Gossypium raimondii HOM05D004708 ORTHO05D005573 2.2e-50 202.6 167 64.1
Potri.005G121200 Populus trichocarpa HOM05D004708 ORTHO05D005573 2.2e-50 202.6 168 64.3
CAN.G1645.15 Capsicum annuum HOM05D004708 ORTHO05D005573 2.9e-50 202.2 164 68.9
SGA_v2.0_scaffold258G45779 Striga asiatica HOM05D004708 ORTHO05D005573 3.8e-50 201.8 173 64.2
AUR62007583 Chenopodium quinoa HOM05D004708 ORTHO05D005573 6.4e-50 201.1 160 66.9
Thecc.01G032800 Theobroma cacao HOM05D004708 ORTHO05D005573 6.4e-50 201.1 176 63.1
Aa31LG8G15760 Aethionema arabicum HOM05D004708 ORTHO05D005573 8.4e-50 200.7 160 66.9
AT2G18250 Arabidopsis thaliana HOM05D004708 ORTHO05D005573 1.1e-49 200.3 161 65.2
CsaV3_3G014460 Cucumis sativus L. HOM05D004708 ORTHO05D005573 1.1e-49 200.3 170 65.3
Thhalv10022875m.g Eutrema salsugineum HOM05D004708 ORTHO05D005573 2.4e-49 199.1 164 64.0
Aqoxy3G01739 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 3.2e-49 198.7 161 66.5
FvH4_1g13011 Fragaria vesca HOM05D004708 ORTHO05D005573 3.2e-49 198.7 176 64.2
Carub.0003s3243 Capsella rubella HOM05D004708 ORTHO05D005573 5.5e-49 198.0 164 63.4
DCAR_023857 Daucus carota HOM05D004708 ORTHO05D005573 5.5e-49 198.0 158 67.7
CiPaw.01G043700 Carya illinoinensis HOM05D004708 ORTHO05D005573 7.1e-49 197.6 162 65.4
unitig_21.g20250 Utricularia gibba HOM05D004708 ORTHO05D005573 7.1e-49 197.6 169 65.1
Manes.02G095600 Manihot esculenta HOM05D004708 ORTHO05D005573 1.2e-48 196.8 165 64.2
Hund13990 Selenicereus undatus HOM05D004708 ORTHO05D005573 1.6e-48 196.4 171 60.8
AL3G51520 Arabidopsis lyrata HOM05D004708 ORTHO05D005573 2.7e-48 195.7 161 64.0
Sp3g31670 Schrenkiella parvula HOM05D004708 ORTHO05D005573 3.5e-48 195.3 164 63.4
MELO3C006648.2 Cucumis melo HOM05D004708 ORTHO05D005573 4.6e-48 194.9 169 63.3
COL.COLO4_22050 Corchorus olitorius HOM05D004708 ORTHO05D005573 6.0e-48 194.5 176 63.1
RcHm_v2.0_Chr2g0101171 Rosa chinensis HOM05D004708 ORTHO05D005573 7.9e-48 194.1 167 63.5
BcaC04g22917 Brassica carinata HOM05D004708 ORTHO05D005573 1.8e-47 193.0 160 63.1
BolC9t54282H Brassica oleracea HOM05D004708 ORTHO05D005573 2.3e-47 192.6 160 63.1
Duzib264G1087 Durio zibethinus HOM05D004708 ORTHO05D005573 2.3e-47 192.6 166 61.4
ATR0796G251 Amborella trichopoda HOM05D004708 ORTHO05D005573 3.9e-47 191.8 167 60.5
CARHR108820 Cardamine hirsuta HOM05D004708 ORTHO05D005573 3.9e-47 191.8 161 62.1
PGR119G0658 Punica granatum HOM05D004708 ORTHO05D005573 5.1e-47 191.4 176 61.9
Aqoxy5G01592 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 8.7e-47 190.7 168 60.7
BcaB07g31677 Brassica carinata HOM05D004708 ORTHO05D005573 8.7e-47 190.7 168 60.7
Ca_24863_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 1.5e-46 189.9 172 59.9
Lsat_1_v5_gn_2_77221 Lactuca sativa HOM05D004708 ORTHO05D005573 1.5e-46 189.9 163 63.8
BcaB03g16615 Brassica carinata HOM05D004708 ORTHO05D005573 4.3e-46 188.3 164 61.0
C09p13900 Brassica napus HOM05D004708 ORTHO05D005573 1.3e-45 186.8 155 62.6
Zm00001eb231510 Zea mays HOM05D004708 ORTHO05D005573 1.3e-45 186.8 158 62.0
PSO764G0091 Papaver somniferum HOM05D004708 ORTHO05D005573 1.6e-45 186.4 171 61.4
BcaC06g36391 Brassica carinata HOM05D004708 ORTHO05D005573 2.8e-45 185.7 161 60.9
A07p02450 Brassica napus HOM05D004708 ORTHO05D005573 4.8e-45 184.9 161 60.2
BraA07t28041Z Brassica rapa HOM05D004708 ORTHO05D005573 4.8e-45 184.9 161 60.2
Ca_21297_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 4.8e-45 184.9 172 58.1
MD15G1258500 Malus domestica HOM05D004708 ORTHO05D005573 1.1e-44 183.7 168 59.5
SEGI_37374 Sequoiadendron giganteum HOM05D004708 ORTHO05D005573 1.1e-44 183.7 158 63.9
Lj2g0001027 Lotus japonicus HOM05D002605 ORTHO05D002842 1.8e-44 183.0 167 59.9
C07p04600 Brassica napus HOM05D004708 ORTHO05D005573 3.1e-44 182.2 161 60.2
BolC7t40861H Brassica oleracea HOM05D004708 ORTHO05D005573 3.1e-44 182.2 161 60.2
ECA238G4849 Erigeron canadensis HOM05D004708 ORTHO05D005573 6.9e-44 181.0 162 62.3
Sabra05G0099900 Salix brachista HOM05D004708 ORTHO05D005573 9.0e-44 180.6 213 51.6
THA.LOC104807464 Tarenaya hassleriana HOM05D004708 ORTHO05D005573 9.0e-44 180.6 197 51.8
Medtr8g073890 Medicago truncatula HOM05D004708 ORTHO05D005573 2.6e-43 179.1 166 59.0
Os07g0179400 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 3.4e-43 178.7 154 62.3
FAN25G0668 Fragaria x ananassa HOM05D004708 ORTHO05D005573 4.5e-43 178.3 161 59.0
Psat2g158360 Pisum sativum HOM05D004708 ORTHO05D005573 5.8e-43 177.9 165 57.6
Medtr5g020680 Medicago truncatula HOM05D004708 ORTHO05D005573 1.0e-42 177.2 167 58.1
Hma1.2p1_1820F.1_g304110 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 2.9e-42 175.6 139 69.8
Lalb_Chr05g0212721 Lupinus albus HOM05D004708 ORTHO05D005573 2.9e-42 175.6 165 58.8
Peaxi162Scf00130g00618 Petunia axillaris HOM05D004708 ORTHO05D005573 2.9e-42 175.6 150 62.0
VMungo1215G3002 Vigna mungo HOM05D004708 ORTHO05D005573 3.8e-42 175.3 174 53.4
Gohir.A12G064100 Gossypium hirsutum HOM05D004708 ORTHO05D005573 4.9e-42 174.9 149 65.8
Glyma.01G173050 Glycine max HOM05D004708 ORTHO05D005573 6.5e-42 174.5 174 55.2
arahy.Tifrunner.gnm1.ann1.CZ32YF Arachis hypogaea HOM05D004708 ORTHO05D005573 1.4e-41 173.3 165 57.6
FAN19G0555 Fragaria x ananassa HOM05D004708 ORTHO05D005573 1.4e-41 173.3 209 53.6
TPR.G2405 Trifolium pratense HOM05D004708 ORTHO05D005573 1.4e-41 173.3 167 56.3
PSO339G0290 Papaver somniferum HOM05D004708 ORTHO05D005573 1.9e-41 172.9 153 62.1
arahy.Tifrunner.gnm1.ann1.V6C6W3 Arachis hypogaea HOM05D004708 ORTHO05D005573 2.5e-41 172.6 162 58.6
arahy.Tifrunner.gnm1.ann1.Y7U3HW Arachis hypogaea HOM05D004708 ORTHO05D005573 2.5e-41 172.6 162 58.6
TAR624G0473 Trochodendron aralioides HOM05D004708 ORTHO05D005573 2.5e-41 172.6 155 59.4
Phvul.002G032200 Phaseolus vulgaris HOM05D004708 ORTHO05D005573 7.1e-41 171.0 174 52.9
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 4.6e-40 168.3 165 54.5
HPP92_014750 Vanilla planifolia HOM05D004708 ORTHO05D005573 3.0e-39 165.6 146 59.6
Gohir.D09G166500 Gossypium hirsutum HOM05D004708 ORTHO05D005573 2.5e-38 162.5 174 55.7
arahy.Tifrunner.gnm1.ann1.KFYL3R Arachis hypogaea HOM05D004708 ORTHO05D005573 5.7e-38 161.4 159 57.2
CDE12G0116 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 9.7e-38 160.6 166 53.0
CDE01G0816 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 1.3e-37 160.2 152 57.2
Pp3c18_16890 Physcomitrium patens HOM05D004708 ORTHO05D005573 6.9e-36 154.5 158 53.2
Glyma.02G276900 Glycine max HOM05D004708 ORTHO05D005573 1.3e-34 150.2 146 54.8
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 2.9e-34 149.1 141 56.7
SMO357G0013 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 2.9e-34 149.1 154 54.5
SMO318G0001 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 8.5e-34 147.5 170 51.2
BcaC04g22919 Brassica carinata HOM05D004708 ORTHO05D005573 2.3e-31 139.4 188 46.3
FvH4_3g26020 Fragaria vesca HOM05D004708 ORTHO05D005573 2.3e-31 139.4 132 55.3
Gohir.D12G064000 Gossypium hirsutum HOM05D004708 ORTHO05D005573 1.1e-30 137.1 117 59.0
Lj2A454G55 Lonicera japonica HOM05D004708 ORTHO05D005573 2.0e-30 136.3 144 59.0
A09p11790 Brassica napus HOM05D004708 ORTHO05D005573 2.5e-30 136.0 130 56.2
Mapoly0065s0018 Marchantia polymorpha HOM05D004708 ORTHO05D005573 1.3e-29 133.7 164 48.2
CSS0019358 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 4.8e-29 131.7 117 66.7
CARHR108850 Cardamine hirsuta HOM05D004708 ORTHO05D005573 1.1e-28 130.6 119 58.0
FAN26G2067 Fragaria x ananassa HOM05D004708 ORTHO05D005573 5.9e-27 124.8 92 67.4
Zm00001eb301320 Zea mays HOM05D004708 ORTHO05D005573 1.0e-26 124.0 152 48.7
Nitab4.5_0009165g0010 Nicotiana tabacum HOM05D000001 ORTHO05D013582 2.9e-26 122.5 105 67.6
CBR_g4476 Chara braunii HOM05D003322 ORTHO05D004228 5.5e-25 118.2 158 43.7
PSO731G0046 Papaver somniferum HOM05D004708 ORTHO05D005573 7.9e-24 114.4 112 59.8
Nn7g38122 Nelumbo nucifera HOM05D004708 ORTHO05D005573 5.1e-23 111.7 77 67.5
PSO384G2349 Papaver somniferum HOM05D004708 ORTHO05D005573 1.5e-22 110.2 133 51.1
HanXRQChr17g0534461 Helianthus annuus HOM05D004708 ORTHO05D005573 1.8e-20 103.2 74 68.9
Os02g0134000 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 5.3e-20 101.7 105 52.4
SGA_v2.0_scaffold276G46612 Striga asiatica HOM05D004708 ORTHO05D005573 1.0e-18 97.4 112 53.6
CAN.G53.14 Capsicum annuum HOM05D004708 ORTHO05D005573 1.3e-18 97.1 54 85.2
Actinidia33865 Actinidia chinensis HOM05D004708 ORTHO05D005573 3.8e-18 95.5 68 76.5
AagrBONN_evm.TU.Sc2ySwM_228.2017 Anthoceros agrestis HOM05D004708 ORTHO05D005573 3.6e-16 89.0 113 51.3
CAN.G2875.1 Capsicum annuum HOM05D004708 ORTHO05D005573 4.7e-16 88.6 97 59.8
Pp3c18_18790 Physcomitrium patens HOM05D004708 ORTHO05D005573 3.0e-15 85.9 139 42.4
CAN.G53.15 Capsicum annuum HOM05D004708 ORTHO05D005573 1.1e-14 84.0 54 83.3
BraA09t36827Z Brassica rapa HOM05D004708 ORTHO05D005573 3.3e-14 82.4 99 50.5
BcaC06g36392 Brassica carinata HOM05D000492 ORTHO05D005571 4.1e-12 75.5 52 71.2
Cre13.g590550 Chlamydomonas reinhardtii HOM05D004708 ORTHO05D005573 2.6e-11 72.8 175 29.1
MCO08G231 Micromonas commoda HOM05D004708 ORTHO05D005573 7.7e-11 71.2 150 34.0
Actinidia12710 Actinidia chinensis HOM05D004708 ORTHO05D005573 8.5e-10 67.8 48 70.8
arahy.Tifrunner.gnm1.ann1.W5EA8A Arachis hypogaea HOM05D004708 ORTHO05D005573 7.2e-09 64.7 59 59.3
AagrBONN_evm.TU.Sc2ySwM_368.1168 Anthoceros agrestis HOM05D004708 ORTHO05D005573 2.1e-08 63.2 37 91.9
PRCOL_00004729 Prasinoderma coloniale HOM05D004708 ORTHO05D005573 4.0e-07 58.9 151 29.1


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