Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39995 Davidia involucrata HOM05D005644 ORTHO05D007092 3.7e-108 394.8 192 100.0
Cc07_g09670 Coffea canephora HOM05D005644 ORTHO05D007092 5.2e-102 374.4 192 93.8
TWI73G0320 Tripterygium wilfordii HOM05D005644 ORTHO05D007092 1.2e-101 373.2 190 93.2
vmacro17823 Vaccinium macrocarpon HOM05D005644 ORTHO05D007092 3.4e-101 371.7 191 94.8
Oeu050374.1 Olea europaea HOM05D005644 ORTHO05D007092 7.6e-101 370.5 192 93.2
Thecc.01G033400 Theobroma cacao HOM05D005644 ORTHO05D007092 7.6e-101 370.5 190 93.7
Gohir.A02G166400 Gossypium hirsutum HOM05D005644 ORTHO05D007092 9.9e-101 370.2 190 93.7
Potri.007G023500 Populus trichocarpa HOM05D005644 ORTHO05D007092 9.9e-101 370.2 190 92.6
Gohir.D03G013600 Gossypium hirsutum HOM05D005644 ORTHO05D007092 1.7e-100 369.4 190 93.7
Gorai.003G013900 Gossypium raimondii HOM05D005644 ORTHO05D007092 1.7e-100 369.4 190 93.7
GSVIVG01018941001 Vitis vinifera HOM05D005644 ORTHO05D007092 3.8e-100 368.2 190 93.2
Potri.005G121700 Populus trichocarpa HOM05D005644 ORTHO05D007092 4.9e-100 367.9 190 91.6
TAR101G0001 Trochodendron aralioides HOM05D005644 ORTHO05D007092 4.9e-100 367.9 190 92.6
SalBow5G1882 Salvia bowleyana HOM05D005644 ORTHO05D007092 6.4e-100 367.5 192 92.2
Duzib264G1010 Durio zibethinus HOM05D005644 ORTHO05D007092 1.9e-99 365.9 190 92.6
Manes.02G095200 Manihot esculenta HOM05D005644 ORTHO05D007092 1.9e-99 365.9 190 92.1
Lalb_Chr09g0333481 Lupinus albus HOM05D005644 ORTHO05D007092 2.4e-99 365.5 191 91.1
Lj2A454T58 Lonicera japonica HOM05D005644 ORTHO05D007092 3.2e-99 365.2 190 93.7
MSTRG.3592 Avicennia marina HOM05D005644 ORTHO05D007092 4.1e-99 364.8 192 91.1
Nn1g04949 Nelumbo nucifera HOM05D005644 ORTHO05D007092 5.4e-99 364.4 190 92.6
Ciclev10022394m.g Citrus clementina HOM05D005644 ORTHO05D007092 9.2e-99 363.6 190 91.1
Oeu002799.2 Olea europaea HOM05D005644 ORTHO05D007092 1.6e-98 362.8 192 91.1
Prupe.7G156300 Prunus persica HOM05D005644 ORTHO05D007092 7.8e-98 360.5 190 92.6
SGA_v2.0_scaffold44G16541 Striga asiatica HOM05D005644 ORTHO05D007092 7.8e-98 360.5 192 90.1
PSO675G1163 Papaver somniferum HOM05D005644 ORTHO05D007092 1.0e-97 360.1 192 87.5
Migut.L00368 Erythranthe guttata HOM05D005644 ORTHO05D007092 2.3e-97 359.0 192 89.6
Migut.L00376 Erythranthe guttata HOM05D005644 ORTHO05D007092 2.3e-97 359.0 192 89.6
Glyma.16G138200 Glycine max HOM05D005644 ORTHO05D007092 2.3e-97 359.0 191 90.1
Phvul.003G254800 Phaseolus vulgaris HOM05D005644 ORTHO05D007092 2.3e-97 359.0 191 89.5
MELO3C026580.2 Cucumis melo HOM05D005644 ORTHO05D007092 3.0e-97 358.6 190 89.5
PSO541G0643 Papaver somniferum HOM05D005644 ORTHO05D007092 3.0e-97 358.6 192 87.5
Psat4g094240 Pisum sativum HOM05D005644 ORTHO05D007092 3.0e-97 358.6 191 90.6
QL06p046522 Quercus lobata HOM05D005644 ORTHO05D007092 3.0e-97 358.6 189 90.5
arahy.Tifrunner.gnm1.ann1.59MT2Q Arachis hypogaea HOM05D005644 ORTHO05D007092 3.9e-97 358.2 191 89.0
Atru.chr7.2312 Acer truncatum HOM05D005644 ORTHO05D007092 8.7e-97 357.1 188 89.9
CiPaw.02G018800 Carya illinoinensis HOM05D005644 ORTHO05D007092 8.7e-97 357.1 190 89.5
MD02G1145400 Malus domestica HOM05D005644 ORTHO05D007092 8.7e-97 357.1 190 91.1
arahy.Tifrunner.gnm1.ann1.SR5TCU Arachis hypogaea HOM05D005644 ORTHO05D007092 1.5e-96 356.3 191 88.5
CsaV3_3G042790 Cucumis sativus L. HOM05D005644 ORTHO05D007092 1.5e-96 356.3 190 88.9
Solyc02g062680.3 Solanum lycopersicum HOM05D005644 ORTHO05D007092 1.5e-96 356.3 192 89.6
Sopen02g013700 Solanum pennellii HOM05D005644 ORTHO05D007092 1.5e-96 356.3 192 89.6
Ca_22319_v3 Cicer arietinum L. HOM05D005644 ORTHO05D007092 1.9e-96 355.9 191 89.5
Manes.01G136400 Manihot esculenta HOM05D005644 ORTHO05D007092 1.9e-96 355.9 190 90.0
PGSC0003DMG400015483 Solanum tuberosum HOM05D005644 ORTHO05D007092 3.3e-96 355.1 192 89.1
Medtr8g077200 Medicago truncatula HOM05D005644 ORTHO05D007092 9.6e-96 353.6 191 89.5
Hund21503 Selenicereus undatus HOM05D005644 ORTHO05D007092 9.6e-96 353.6 190 87.9
Sed0008907 Sechium edule HOM05D005644 ORTHO05D007092 1.6e-95 352.8 190 87.9
Eucgr.I02428 Eucalyptus grandis HOM05D005644 ORTHO05D007092 2.8e-95 352.1 190 88.4
AL3G51550 Arabidopsis lyrata HOM05D005644 ORTHO05D007092 8.1e-95 350.5 190 86.8
AT2G18290 Arabidopsis thaliana HOM05D005644 ORTHO05D007092 8.1e-95 350.5 190 86.8
Aqoxy6G01133 Aquilegia oxysepala HOM05D005644 ORTHO05D007092 1.1e-94 350.1 192 85.4
CAN.G53.17 Capsicum annuum HOM05D005644 ORTHO05D007092 1.1e-94 350.1 192 87.5
EL10Ac4g07935 Beta vulgaris HOM05D005644 ORTHO05D007092 5.2e-94 347.8 190 86.8
unitig_37.g12363 Utricularia gibba HOM05D005644 ORTHO05D007092 6.9e-94 347.4 192 87.0
Lj4g0022669 Lotus japonicus HOM05D005644 ORTHO05D007092 9.0e-94 347.1 192 87.0
Aa31LG8G15730 Aethionema arabicum HOM05D005644 ORTHO05D007092 1.5e-93 346.3 190 86.3
Sp3g31700 Schrenkiella parvula HOM05D005644 ORTHO05D007092 3.4e-93 345.1 190 85.8
CANSAT01G2444 Cannabis sativa HOM05D005644 ORTHO05D007092 4.4e-93 344.7 190 86.8
HanXRQChr09g0261331 Helianthus annuus HOM05D005644 ORTHO05D007092 9.9e-93 343.6 190 86.8
THA.LOC104819776 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 1.3e-92 343.2 190 86.3
Carub.0003s3246 Capsella rubella HOM05D005644 ORTHO05D007092 1.7e-92 342.8 190 85.3
ClCG10G013900 Citrullus lanatus HOM05D005644 ORTHO05D007092 2.2e-92 342.4 216 77.8
FvH4_1g13080 Fragaria vesca HOM05D005644 ORTHO05D007092 2.2e-92 342.4 192 87.0
Rhsim11G0151400 Rhododendron simsii HOM05D005644 ORTHO05D007092 2.2e-92 342.4 244 73.4
A06p33310 Brassica napus HOM05D005644 ORTHO05D007092 2.9e-92 342.0 190 85.3
C03p59070 Brassica napus HOM05D005644 ORTHO05D007092 2.9e-92 342.0 190 85.3
BolC3t18168H Brassica oleracea HOM05D005644 ORTHO05D007092 2.9e-92 342.0 190 85.3
Glyma.02G055400 Glycine max HOM05D005644 ORTHO05D007092 3.8e-92 341.7 191 86.9
MBI02_g12270_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 3.8e-92 341.7 207 80.7
Thhalv10022866m.g Eutrema salsugineum HOM05D005644 ORTHO05D007092 4.9e-92 341.3 190 85.3
RcHm_v2.0_Chr2g0101251 Rosa chinensis HOM05D005644 ORTHO05D007092 6.4e-92 340.9 190 87.4
THA.LOC104804235 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 8.4e-92 340.5 190 86.3
ECA232G0363 Erigeron canadensis HOM05D005644 ORTHO05D007092 1.1e-91 340.1 190 85.3
FvH4_5g29620 Fragaria vesca HOM05D005644 ORTHO05D007092 1.4e-91 339.7 192 85.9
Sc16g0002690 Simmondsia chinensis HOM05D005644 ORTHO05D007092 1.4e-91 339.7 190 84.7
BcaB08g34803 Brassica carinata HOM05D005644 ORTHO05D007092 1.9e-91 339.3 190 84.2
PGR031G1764 Punica granatum HOM05D005644 ORTHO05D007092 1.6e-90 336.3 194 85.1
TPR.G24098 Trifolium pratense HOM05D005644 ORTHO05D007092 4.6e-90 334.7 230 74.3
Lsat_1_v5_gn_4_151201 Lactuca sativa HOM05D005644 ORTHO05D007092 6.0e-90 334.3 179 89.9
AUR62020530 Chenopodium quinoa HOM05D005644 ORTHO05D007092 1.3e-89 333.2 190 84.2
AUR62043224 Chenopodium quinoa HOM05D005644 ORTHO05D007092 1.3e-89 333.2 190 84.2
ATR0594G186 Amborella trichopoda HOM05D005644 ORTHO05D007092 3.9e-89 331.6 192 82.3
Zm00001eb342630 Zea mays HOM05D005644 ORTHO05D007092 2.1e-87 325.9 177 86.4
CSS0024834 Camellia sinensis var. sinensis HOM05D005644 ORTHO05D007092 3.6e-87 325.1 164 95.1
Os05g0579800 Oryza sativa ssp. japonica HOM05D005644 ORTHO05D007092 6.2e-87 324.3 200 78.5
PGR083G1765 Punica granatum HOM05D005644 ORTHO05D007092 2.4e-86 322.4 190 82.1
AUR62034193 Chenopodium quinoa HOM05D005644 ORTHO05D007092 4.0e-86 321.6 190 81.1
Nitab4.5_0000136g0330 Nicotiana tabacum HOM05D005644 ORTHO05D007092 9.0e-86 320.5 177 87.6
BraA06t26260Z Brassica rapa HOM05D005644 ORTHO05D007092 3.4e-85 318.5 196 79.6
Nitab4.5_0005482g0020 Nicotiana tabacum HOM05D005644 ORTHO05D007092 4.5e-85 318.2 179 87.7
CDE04G3399 Ceratophyllum demersum HOM05D005644 ORTHO05D007092 1.3e-84 316.6 164 89.0
Peaxi162Scf00008g03525 Petunia axillaris HOM05D005644 ORTHO05D007092 1.7e-84 316.2 192 83.3
VMungo0251G3244 Vigna mungo HOM05D005644 ORTHO05D007092 4.9e-84 314.7 167 91.0
Zm00001eb294590 Zea mays HOM05D005644 ORTHO05D007092 9.3e-83 310.5 177 81.9
FAN19G1519 Fragaria x ananassa HOM05D005644 ORTHO05D007092 1.6e-79 299.7 177 84.2
Sabra05G0100200 Salix brachista HOM05D005644 ORTHO05D007092 1.6e-79 299.7 156 90.4
Atru.chr3.600 Acer truncatum HOM05D005644 ORTHO05D007092 3.1e-78 295.4 190 74.2
BolC7t40857H Brassica oleracea HOM05D005644 ORTHO05D007092 2.1e-74 282.7 189 73.5
FAN28G2376 Fragaria x ananassa HOM05D005644 ORTHO05D003509 1.5e-72 276.6 159 87.4
FAN23G1669 Fragaria x ananassa HOM05D005644 ORTHO05D007092 1.9e-72 276.2 160 86.9
FAN08G2945 Fragaria x ananassa HOM05D005644 ORTHO05D007092 2.1e-71 272.7 158 85.4
MBI08_g40822_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 7.6e-69 264.2 224 64.3
Cpa.g.sc6.131 Carica papaya HOM05D005644 ORTHO05D007092 3.8e-68 261.9 144 87.5
Hma1.2p1_0789F.1_g218290 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 3.8e-68 261.9 134 94.8
HPP92_023420 Vanilla planifolia HOM05D005644 ORTHO05D007092 2.7e-66 255.8 194 67.5
Mapoly0106s0034 Marchantia polymorpha HOM05D005644 ORTHO05D007092 1.8e-62 243.0 170 67.1
BcaC06g36396 Brassica carinata HOM05D005644 ORTHO05D007092 2.4e-62 242.7 164 72.0
SGA_v2.0_scaffold2G01321 Striga asiatica HOM05D005644 ORTHO05D007092 4.1e-62 241.9 192 67.2
FAN26G0781 Fragaria x ananassa HOM05D000577 ORTHO05D003509 6.5e-60 234.6 135 85.9
Pp3c7_6320 Physcomitrium patens HOM05D005644 ORTHO05D007092 9.4e-59 230.7 191 59.7
AagrBONN_evm.TU.Sc2ySwM_362.2207 Anthoceros agrestis HOM05D005644 ORTHO05D007092 3.9e-57 225.3 173 61.3
SMO137G0236 Selaginella moellendorffii HOM05D005644 ORTHO05D007092 5.1e-57 224.9 170 61.8
FAN18G2110 Fragaria x ananassa HOM05D005644 ORTHO05D007092 8.2e-55 217.6 169 67.5
MCO15G254 Micromonas commoda HOM05D005644 ORTHO05D007092 2.6e-53 212.6 178 56.7
CARHR108880 Cardamine hirsuta HOM05D005644 ORTHO05D007092 5.0e-52 208.4 112 86.6
PRCOL_00001837 Prasinoderma coloniale HOM05D005644 ORTHO05D007092 1.1e-48 197.2 166 58.4
SEGI_22782 Sequoiadendron giganteum HOM05D005644 ORTHO05D007092 2.0e-45 186.4 110 78.2
Haze_27504 Corylus avellana HOM05D005644 ORTHO05D007092 2.1e-42 176.4 142 56.3
CBR_g49399 Chara braunii HOM05D005644 ORTHO05D007092 2.8e-39 166.0 112 66.1
Cre13.g571850 Chlamydomonas reinhardtii HOM05D005644 ORTHO05D007092 5.3e-38 161.8 144 50.0
Hma1.2p1_2451F.1_g322360 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 2.1e-34 149.8 137 59.9
DCAR_025950 Daucus carota HOM05D005644 ORTHO05D007092 4.4e-32 142.1 132 57.6
MBI02_g42708_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 4.8e-31 138.7 130 60.8
FAN13G0528 Fragaria x ananassa HOM05D005644 ORTHO05D007092 3.1e-30 136.0 165 49.7
MBI02_g23461_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.8e-25 120.2 216 40.3
C07p04570 Brassica napus HOM05D005644 ORTHO05D007092 3.0e-25 119.4 126 50.8
MBI02_g17151_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 2.6e-24 116.3 130 50.8
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 4.8e-23 112.1 120 52.5
MBI18_g01974_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.8e-22 110.2 68 76.5
Hma1.2p1_0450F.1_g155660 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 2.0e-21 106.7 59 84.7
Hund21501 Selenicereus undatus HOM05D005644 ORTHO05D007092 1.4e-17 94.0 53 86.8
Ah.13g077660 Amaranthus hybridus HOM05D005644 ORTHO05D007092 2.6e-16 89.7 57 68.4
COL.COLO4_22055 Corchorus olitorius HOM05D005644 ORTHO05D007092 1.1e-14 84.3 47 85.1
Dinv38404 Davidia involucrata HOM05D005644 ORTHO05D007092 1.2e-10 70.9 39 84.6
Thecc.08G151500 Theobroma cacao HOM05D005644 ORTHO05D007092 1.4e-09 67.4 33 84.8
MBI16_g04464_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 2.3e-09 66.6 105 40.0


User provided reference genes

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