Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 4.9e-64 247.7 127 100.0
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 9.3e-31 137.1 132 59.1
CSS0018588 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 2.1e-30 136.0 135 63.0
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 4.6e-30 134.8 127 59.8
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 6.0e-30 134.4 132 60.6
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 2.3e-29 132.5 131 59.5
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 5.1e-29 131.3 127 59.8
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 8.7e-29 130.6 131 61.1
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 1.5e-28 129.8 124 58.9
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 1.9e-28 129.4 132 56.8
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 6.2e-27 124.4 136 58.1
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 1.4e-26 123.2 96 66.7
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 6.9e-26 120.9 126 55.6
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 6.9e-26 120.9 126 54.8
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 9.0e-26 120.6 137 54.0
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 9.0e-26 120.6 133 52.6
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 1.2e-25 120.2 139 53.2
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 1.2e-25 120.2 104 65.4
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.5e-25 119.8 125 55.2
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 1.5e-25 119.8 130 55.4
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.0e-25 119.4 132 53.0
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 4.5e-25 118.2 128 53.9
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 5.8e-25 117.9 79 74.7
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 1.0e-24 117.1 132 52.3
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 1.0e-24 117.1 129 56.6
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 1.7e-24 116.3 133 55.6
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 2.9e-24 115.5 129 53.5
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 2.9e-24 115.5 132 51.5
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 1.4e-23 113.2 130 53.8
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 1.9e-23 112.8 85 69.4
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 1.9e-23 112.8 129 57.4
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.9e-23 112.8 129 57.4
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.9e-23 112.8 133 52.6
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.2e-23 112.1 132 50.0
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 3.2e-23 112.1 132 50.0
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 4.2e-23 111.7 131 54.2
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 4.2e-23 111.7 131 51.9
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 5.5e-23 111.3 144 51.4
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 5.5e-23 111.3 129 55.8
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 7.1e-23 110.9 93 62.4
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 1.2e-22 110.2 94 66.0
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 1.6e-22 109.8 124 55.6
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 2.1e-22 109.4 103 59.2
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 2.1e-22 109.4 126 52.4
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 2.7e-22 109.0 106 58.5
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 3.5e-22 108.6 126 53.2
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 6.0e-22 107.8 111 60.4
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 6.0e-22 107.8 124 52.4
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 2.3e-21 105.9 125 52.0
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 3.9e-21 105.1 136 51.5
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 5.1e-21 104.8 125 51.2
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 5.1e-21 104.8 125 51.2
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 5.1e-21 104.8 125 53.6
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 6.7e-21 104.4 125 51.2
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 1.1e-20 103.6 135 51.9
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 1.1e-20 103.6 131 50.4
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 1.5e-20 103.2 127 50.4
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 1.5e-20 103.2 152 48.7
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 1.5e-20 103.2 92 60.9
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 1.9e-20 102.8 125 49.6
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 1.9e-20 102.8 125 49.6
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 1.9e-20 102.8 76 67.1
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 3.3e-20 102.1 105 55.2
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 7.4e-20 100.9 151 46.4
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 9.7e-20 100.5 131 50.4
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 1.3e-19 100.1 105 57.1
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 1.6e-19 99.8 89 62.9
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 8.2e-19 97.4 134 44.8
CSS0029658 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 8.2e-19 97.4 110 50.9
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 8.2e-19 97.4 138 47.8
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 8.2e-19 97.4 133 49.6
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 1.4e-18 96.7 70 71.4
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.8e-18 96.3 83 65.1
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 2.4e-18 95.9 139 48.9
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 3.1e-18 95.5 139 49.6
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 4.1e-18 95.1 163 42.9
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 6.9e-18 94.4 130 51.5
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 9.0e-18 94.0 133 45.9
MD02G1148700 Malus domestica HOM05D006100 ORTHO05D007539 9.0e-18 94.0 131 44.3
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 1.5e-17 93.2 64 75.0
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 1.5e-17 93.2 64 75.0
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 1.5e-17 93.2 131 47.3
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 2.0e-17 92.8 70 71.4
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 5.9e-17 91.3 107 56.1
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 5.9e-17 91.3 147 44.2
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 7.6e-17 90.9 88 60.2
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 7.6e-17 90.9 88 60.2
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 1.0e-16 90.5 96 55.2
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.0e-16 90.5 131 48.9
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 1.7e-16 89.7 131 46.6
Manes.01G135000 Manihot esculenta HOM05D006100 ORTHO05D007539 2.2e-16 89.4 110 52.7
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 5.0e-16 88.2 65 69.2
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.9e-15 86.3 61 68.9
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 1.9e-15 86.3 81 59.3
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 3.2e-15 85.5 117 49.6
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 7.2e-15 84.3 124 45.2
Glyma.16G140500 Glycine max HOM05D006100 ORTHO05D007539 1.2e-14 83.6 111 47.7
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 1.6e-14 83.2 128 45.3
Prupe.7G153800 Prunus persica HOM05D006100 ORTHO05D007539 1.6e-14 83.2 136 43.4
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 1.6e-14 83.2 122 45.9
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 4.6e-14 81.6 76 60.5
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 2.3e-13 79.3 132 47.7
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 5.1e-13 78.2 110 43.6
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 2.5e-12 75.9 107 47.7
HanXRQChr16g0530351 Helianthus annuus HOM05D006100 ORTHO05D007539 4.3e-12 75.1 123 35.8
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 5.7e-12 74.7 132 43.9
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 5.7e-12 74.7 63 65.1
EL10Ac6g15568 Beta vulgaris HOM05D006100 ORTHO05D007539 1.3e-11 73.6 123 46.3
Gorai.011G102200 Gossypium raimondii HOM05D006100 ORTHO05D007539 1.3e-11 73.6 99 46.5
AUR62007561 Chenopodium quinoa HOM05D006100 ORTHO05D007539 6.3e-11 71.2 132 43.9
Lj4g0020328 Lotus japonicus HOM05D006100 ORTHO05D007539 6.3e-11 71.2 122 41.8
MELO3C007824.2 Cucumis melo HOM05D006100 ORTHO05D007539 8.2e-11 70.9 107 43.9
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 8.2e-11 70.9 123 46.3
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 1.1e-10 70.5 98 53.1
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 3.1e-10 68.9 85 50.6
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 5.3e-10 68.2 56 64.3
CDE01G0731 Ceratophyllum demersum HOM05D006100 ORTHO05D007539 6.9e-10 67.8 109 42.2
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 2.2e-08 62.8 79 54.4
DCAR_025920 Daucus carota HOM05D006100 ORTHO05D007539 5.0e-08 61.6 67 53.7
SalBow5G1753 Salvia bowleyana HOM05D006100 ORTHO05D007539 6.5e-08 61.2 106 36.8
Lsat_1_v5_gn_3_76280 Lactuca sativa HOM05D006100 ORTHO05D007539 2.5e-07 59.3 129 34.1
MSTRG.15273 Avicennia marina HOM05D006100 ORTHO05D007539 7.9e-06 54.3 117 35.0


User provided reference genes

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