Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39871 Davidia involucrata HOM05D008581 ORTHO05D009966 8.0e-187 657.1 380 100.0
Dinv16315 Davidia involucrata HOM05D008581 ORTHO05D009966 1.2e-62 244.6 201 85.1
Hma1.2p1_0200F.1_g086080 Hydrangea macrophylla HOM05D008581 ORTHO05D009966 3.9e-32 143.3 119 64.7
Dinv29971 Davidia involucrata HOM05D008581 ORTHO05D009541 8.1e-30 135.6 88 78.4
Hma1.2p1_1415F.1_g282020 Hydrangea macrophylla HOM05D008581 ORTHO05D009966 2.9e-27 127.1 122 58.2
Rhsim10G0119400 Rhododendron simsii HOM05D008581 ORTHO05D009966 5.4e-26 122.9 129 55.8
Lj7C64T2 Lonicera japonica HOM05D008581 ORTHO05D009966 1.2e-20 105.1 124 50.8
Atru.chr3.365 Acer truncatum HOM05D008581 ORTHO05D009966 4.5e-20 103.2 122 54.9
Ciclev10027209m.g Citrus clementina HOM05D008581 ORTHO05D009966 3.8e-19 100.1 124 52.4
Atru.chr3.367 Acer truncatum HOM05D008581 ORTHO05D009966 4.6e-17 93.2 125 52.8
Cfa004000 Carpinus fangiana HOM05D008581 ORTHO05D009966 4.6e-17 93.2 122 50.8
Nitab4.5_0013032g0010 Nicotiana tabacum HOM05D012691 ORTHO05D009966 4.6e-17 93.2 122 47.5
Lj7C67T5 Lonicera japonica HOM05D008581 ORTHO05D009966 1.0e-16 92.0 124 48.4
QL06p042132 Quercus lobata HOM05D008581 ORTHO05D009966 1.8e-16 91.3 123 50.4
Nitab4.5_0000310g0110 Nicotiana tabacum HOM05D012691 ORTHO05D009966 5.1e-16 89.7 123 44.7
Manes.12G100000 Manihot esculenta HOM05D008581 ORTHO05D009966 6.7e-16 89.4 123 48.0
Lj7C67G2 Lonicera japonica HOM05D008581 ORTHO05D009966 8.7e-16 89.0 124 47.6
QL06p042046 Quercus lobata HOM05D008581 ORTHO05D009966 2.5e-15 87.4 123 49.6
QL06p042091 Quercus lobata HOM05D008581 ORTHO05D009966 2.5e-15 87.4 123 49.6
Peaxi162Scf00916g00007 Petunia axillaris HOM05D012691 ORTHO05D009966 7.4e-15 85.9 121 44.6
Potri.005G136800 Populus trichocarpa HOM05D008581 ORTHO05D009966 1.3e-14 85.1 122 47.5
Potri.007G042000 Populus trichocarpa HOM05D008581 ORTHO05D009966 2.1e-14 84.3 121 47.9
Thecc.01G053400 Theobroma cacao HOM05D008581 ORTHO05D009966 2.1e-14 84.3 120 47.5
Lj7C64T0 Lonicera japonica HOM05D008581 ORTHO05D009966 3.7e-14 83.6 118 48.3
Manes.13G126600 Manihot esculenta HOM05D008581 ORTHO05D009966 1.1e-13 82.0 121 46.3
Lj7C67T3 Lonicera japonica HOM05D008581 ORTHO05D009966 4.0e-13 80.1 123 43.9
DCAR_025723 Daucus carota HOM05D008581 ORTHO05D009966 5.3e-13 79.7 122 43.4
Sabra07G0037300 Salix brachista HOM05D008581 ORTHO05D009966 2.0e-12 77.8 122 46.7
Rhsim08G0101900 Rhododendron simsii HOM05D008581 ORTHO05D338442 5.8e-12 76.3 89 51.7
MSTRG.2893 Avicennia marina HOM05D008581 ORTHO05D009966 8.4e-11 72.4 119 41.2
CiPaw.01G020500 Carya illinoinensis HOM05D015383 ORTHO05D009966 1.1e-10 72.0 123 45.5
Nitab4.5_0000033g0450 Nicotiana tabacum HOM05D012691 ORTHO05D009966 1.1e-10 72.0 120 37.5
QL06p042147 Quercus lobata HOM05D008581 ORTHO05D009966 9.3e-10 68.9 119 45.4
COL.COLO4_11388 Corchorus olitorius HOM05D008581 ORTHO05D009966 1.2e-09 68.6 122 45.1
Duzib264G0703 Durio zibethinus HOM05D008581 ORTHO05D009966 2.1e-09 67.8 120 41.7
CiPaw.01G021000 Carya illinoinensis HOM05D015383 ORTHO05D009966 2.7e-09 67.4 121 42.1
QL06p042049 Quercus lobata HOM05D008581 ORTHO05D009966 3.0e-08 63.9 118 44.9
Nitab4.5_0001064g0010 Nicotiana tabacum HOM05D012691 ORTHO05D009966 6.7e-08 62.8 120 35.8
Eucgr.I00950 Eucalyptus grandis HOM05D022674 ORTHO05D009966 8.7e-08 62.4 124 38.7
Eucgr.I00949 Eucalyptus grandis HOM05D022674 ORTHO05D009966 1.9e-07 61.2 125 42.4
CiPaw.01G020900 Carya illinoinensis HOM05D015383 ORTHO05D009966 3.3e-07 60.5 125 39.2
Lalb_Chr05g0213241 Lupinus albus HOM05D008581 ORTHO05D011864 4.3e-07 60.1 122 41.8
CiPaw.01G020000 Carya illinoinensis HOM05D015383 ORTHO05D009966 5.7e-07 59.7 124 37.1
CiPaw.01G020700 Carya illinoinensis HOM05D015383 ORTHO05D009966 5.7e-07 59.7 100 43.0
Peaxi162Scf00685g00066 Petunia axillaris HOM05D012691 ORTHO05D009966 9.6e-07 58.9 117 36.8
Gorai.003G022200 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.3e-06 58.5 120 40.8
CiPaw.01G020300 Carya illinoinensis HOM05D015383 ORTHO05D009966 1.6e-06 58.2 121 41.3
Gohir.A02G159700 Gossypium hirsutum HOM05D013202 ORTHO05D009966 1.6e-06 58.2 120 38.3
Gorai.003G022300 Gossypium raimondii HOM05D013202 ORTHO05D009966 2.1e-06 57.8 120 38.3
Duzib264G0396 Durio zibethinus HOM05D013202 ORTHO05D009966 3.7e-06 57.0 120 40.8
Gohir.D03G020800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 3.7e-06 57.0 120 40.0
Gorai.003G022000 Gossypium raimondii HOM05D013202 ORTHO05D009966 3.7e-06 57.0 120 40.0
Gohir.A02G159800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 4.8e-06 56.6 120 40.0
Eucgr.F04318 Eucalyptus grandis HOM05D022674 ORTHO05D009966 8.2e-06 55.8 124 39.5


User provided reference genes

Program Settings