Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 0.0e+00 1345.1 700 100.0
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 0.0e+00 1099.7 721 81.6
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 2.0e-308 1062.0 718 79.2
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 3.7e-307 1057.7 713 78.7
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 7.6e-300 1033.5 721 76.8
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 1.3e-299 1032.7 731 77.7
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 7.6e-292 1006.9 731 75.4
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 2.2e-291 1005.4 708 75.3
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 5.4e-290 1000.7 720 74.4
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 7.9e-289 996.9 730 75.9
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 8.7e-288 993.4 711 75.5
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 1.4e-285 986.1 710 74.5
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 2.9e-283 978.4 727 74.1
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 1.0e-280 969.9 705 75.3
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 1.8e-280 969.1 701 73.9
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 1.1e-279 966.5 716 73.0
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 1.5e-279 966.1 721 72.7
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 3.3e-279 964.9 718 72.0
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 3.3e-279 964.9 720 72.1
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 4.3e-279 964.5 724 75.1
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 5.6e-279 964.1 718 71.7
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 9.6e-279 963.4 720 71.7
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 1.3e-278 963.0 709 72.8
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 2.8e-278 961.8 730 73.2
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 2.8e-278 961.8 727 73.3
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 9.0e-277 956.8 733 72.0
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 1.2e-276 956.4 704 72.6
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 2.6e-276 955.3 716 71.9
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 2.6e-276 955.3 720 71.7
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 1.0e-275 953.4 718 70.6
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 1.7e-275 952.6 711 71.6
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 3.8e-275 951.4 716 73.6
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 3.2e-274 948.3 716 74.0
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 3.2e-274 948.3 717 73.2
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 7.1e-274 947.2 716 73.9
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.6e-273 946.0 716 73.5
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 2.7e-273 945.3 716 73.0
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 6.0e-273 944.1 711 71.2
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 7.9e-273 943.7 711 71.0
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 1.3e-272 943.0 715 72.0
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 8.7e-272 940.3 726 71.6
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 5.7e-271 937.6 716 72.8
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 7.4e-271 937.2 713 71.2
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 1.4e-269 932.9 725 69.7
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 4.1e-269 931.4 720 72.4
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 2.0e-268 929.1 940 59.4
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 2.2e-267 925.6 720 68.9
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.5e-266 922.2 703 71.6
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 2.7e-265 918.7 703 71.4
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 3.9e-264 914.8 720 70.0
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 5.7e-263 911.0 636 76.1
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 5.7e-263 911.0 703 71.0
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 1.5e-260 902.9 715 69.8
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.5e-260 902.9 715 70.6
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 2.9e-259 898.7 716 69.0
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 6.5e-259 897.5 715 70.3
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 1.2e-257 893.3 719 69.1
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 2.1e-257 892.5 747 65.7
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 2.1e-257 892.5 719 69.0
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 3.6e-257 891.7 708 67.9
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 1.4e-256 889.8 799 63.1
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 3.9e-256 888.3 725 67.7
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 3.3e-255 885.2 926 57.1
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 4.3e-255 884.8 721 65.3
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 3.7e-254 881.7 710 68.6
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 6.3e-254 880.9 691 69.3
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 1.1e-253 880.2 721 65.3
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 1.8e-253 879.4 715 68.7
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 5.3e-253 877.9 713 66.5
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 9.1e-253 877.1 719 68.4
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 2.0e-252 875.9 723 66.0
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 8.5e-251 870.5 709 67.8
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 1.8e-248 862.8 727 66.7
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 9.7e-247 857.1 699 67.4
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 3.7e-246 855.1 705 67.1
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 1.2e-244 850.1 594 77.3
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 3.5e-244 848.6 732 66.0
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 4.5e-244 848.2 715 65.7
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 4.4e-231 805.1 717 61.6
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 1.7e-230 803.1 713 61.6
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 1.2e-228 797.0 704 63.1
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 2.7e-228 795.8 576 76.2
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 1.3e-227 793.5 759 60.2
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 1.7e-227 793.1 709 61.2
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 5.5e-226 788.1 716 62.0
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 2.0e-220 769.6 716 61.2
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 4.5e-220 768.5 709 60.5
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 5.0e-219 765.0 710 60.4
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 2.5e-218 762.7 723 60.4
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 3.3e-218 762.3 710 60.1
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 4.3e-218 761.9 710 60.3
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 8.9e-216 754.2 746 59.2
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 2.2e-214 749.6 711 59.5
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 2.2e-214 749.6 734 58.2
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 5.0e-211 738.4 588 68.2
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 1.9e-210 736.5 609 65.5
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 2.1e-209 733.0 731 57.3
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 4.4e-207 725.3 730 56.7
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 2.9e-206 722.6 604 64.7
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 1.5e-202 710.3 554 70.6
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 1.2e-193 680.6 709 56.8
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 2.1e-188 663.3 536 67.4
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 7.8e-188 661.4 583 63.8
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 7.1e-173 611.7 582 58.6
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 1.7e-158 563.9 506 63.6
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 6.9e-136 488.8 791 40.1
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 1.2e-135 488.0 762 41.6
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 9.1e-120 435.3 467 58.0
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 8.5e-118 428.7 703 39.1
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 4.9e-105 386.3 295 69.5
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 1.0e-102 378.6 269 71.4
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 3.4e-98 363.6 447 50.6
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 1.0e-94 352.1 309 65.7
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 3.9e-86 323.6 441 45.6
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 7.3e-85 319.3 368 54.9
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 2.0e-66 258.1 287 53.7
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 1.0e-62 245.7 192 67.7
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 1.6e-60 238.4 181 67.4
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 2.9e-49 201.1 153 75.8
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 6.7e-46 189.9 154 62.3
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 1.4e-43 182.2 126 81.7
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 1.2e-42 179.1 97 92.8
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 2.9e-41 174.5 133 75.9
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 1.5e-37 162.2 144 63.9
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 3.3e-37 161.0 107 83.2
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 1.0e-33 149.4 126 65.1
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 3.8e-33 147.5 154 55.2
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 2.5e-24 118.2 114 56.1
CAN.G363.39 Capsicum annuum HOM05D005929 ORTHO05D007869 1.5e-13 82.4 120 44.2
Lsat_1_v5_gn_2_40080 Lactuca sativa HOM05D005929 ORTHO05D029973 4.4e-13 80.9 119 42.0
Cre01.g029050 Chlamydomonas reinhardtii HOM05D003178 ORTHO05D003636 3.6e-07 61.2 184 28.8
CARHR051520 Cardamine hirsuta HOM05D003178 ORTHO05D003636 3.0e-06 58.2 190 23.7
MBI16_g22817_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 3.0e-06 58.2 35 82.9


User provided reference genes

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