Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39835 Davidia involucrata HOM05D007603 ORTHO05D009604 2.9e-161 572.0 323 100.0
Dinv06842 Davidia involucrata HOM05D007603 ORTHO05D009604 2.0e-69 266.9 222 79.7
Hma1.2p1_0002F.1_g002370 Hydrangea macrophylla HOM05D007603 ORTHO05D009604 2.4e-54 216.9 226 63.7
CSS0037684 Camellia sinensis var. sinensis HOM05D007603 ORTHO05D009604 1.2e-50 204.5 249 59.4
Actinidia10989 Actinidia chinensis HOM05D007603 ORTHO05D009604 2.3e-49 200.3 209 63.2
Nitab4.5_0002629g0010 Nicotiana tabacum HOM05D007603 ORTHO05D009604 3.0e-41 173.3 227 60.8
vmacro12353 Vaccinium macrocarpon HOM05D007603 ORTHO05D009604 6.2e-39 165.6 222 58.6
Actinidia11119 Actinidia chinensis HOM05D007603 ORTHO05D009604 1.4e-38 164.5 231 55.8
ClCG02G002280 Citrullus lanatus HOM05D007603 ORTHO05D009604 5.4e-35 152.5 226 52.2
PGSC0003DMG400009384 Solanum tuberosum HOM05D007603 ORTHO05D009604 1.2e-34 151.4 237 58.2
Sed0002279 Sechium edule HOM05D007603 ORTHO05D009604 1.6e-34 151.0 221 48.9
Solyc07g150145.1 Solanum lycopersicum HOM05D007603 ORTHO05D009604 3.5e-34 149.8 247 47.4
MELO3C018861.2 Cucumis melo HOM05D007603 ORTHO05D009604 6.0e-34 149.1 229 45.9
Oeu016901.1 Olea europaea HOM05D007603 ORTHO05D009604 6.0e-34 149.1 233 44.6
Thecc.02G187900 Theobroma cacao HOM05D007603 ORTHO05D009604 1.1e-32 144.8 230 47.0
SalBow7G0820 Salvia bowleyana HOM05D007603 ORTHO05D009604 1.5e-32 144.4 221 46.2
TAR626G1090 Trochodendron aralioides HOM05D001501 ORTHO05D001329 6.2e-31 139.0 193 57.0
QL08p040785 Quercus lobata HOM05D007603 ORTHO05D009604 1.8e-30 137.5 228 57.5
TWI23G0636 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 1.8e-30 137.5 221 50.7
Manes.13G141000 Manihot esculenta HOM05D007603 ORTHO05D009604 3.1e-30 136.7 237 48.5
CiPaw.03G182900 Carya illinoinensis HOM05D007603 ORTHO05D009604 4.0e-30 136.3 222 45.0
Nn1g04268 Nelumbo nucifera HOM05D007603 ORTHO05D009604 4.0e-30 136.3 248 51.2
Sopen07g027470 Solanum pennellii HOM05D007603 ORTHO05D009604 4.0e-30 136.3 241 54.4
Haze_13265 Corylus avellana HOM05D007603 ORTHO05D009604 1.2e-29 134.8 229 52.8
Nitab4.5_0006973g0020 Nicotiana tabacum HOM05D007603 ORTHO05D009604 5.8e-29 132.5 139 63.3
Atru.chr6.2855 Acer truncatum HOM05D007603 ORTHO05D009604 1.3e-28 131.3 227 48.0
Oeu036085.1 Olea europaea HOM05D007603 ORTHO05D009604 1.7e-28 131.0 241 42.7
Sed0026242 Sechium edule HOM05D007603 ORTHO05D009604 2.2e-28 130.6 224 46.0
arahy.Tifrunner.gnm1.ann1.76DKB4 Arachis hypogaea HOM05D007603 ORTHO05D009604 1.4e-27 127.9 223 45.3
Lsat_1_v5_gn_8_137160 Lactuca sativa HOM05D007603 ORTHO05D009604 3.2e-27 126.7 217 49.8
Potri.013G120700 Populus trichocarpa HOM05D007603 ORTHO05D009604 4.2e-27 126.3 237 41.4
Potri.013G072200 Populus trichocarpa HOM05D007603 ORTHO05D009604 5.5e-27 125.9 236 43.6
Sabra13G0062200 Salix brachista HOM05D007603 ORTHO05D009604 9.3e-27 125.2 240 43.8
arahy.Tifrunner.gnm1.ann1.M59RYT Arachis hypogaea HOM05D007603 ORTHO05D009604 2.7e-26 123.6 223 44.4
Ciclev10017455m.g Citrus clementina HOM05D007603 ORTHO05D009604 1.3e-25 121.3 230 45.7
VMungo1080G0021 Vigna mungo HOM05D007603 ORTHO05D009604 8.7e-25 118.6 214 50.9
Sabra13G0102000 Salix brachista HOM05D007603 ORTHO05D009604 1.5e-24 117.9 234 42.3
MSTRG.14321 Avicennia marina HOM05D007603 ORTHO05D009604 1.9e-24 117.5 230 41.7
PGR042G1843 Punica granatum HOM05D007603 ORTHO05D009604 2.5e-24 117.1 237 49.4
Glyma.12G207700 Glycine max HOM05D007603 ORTHO05D009604 3.3e-24 116.7 221 45.7
TWI14G0603 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 7.4e-24 115.5 221 44.8
Cc05_g07840 Coffea canephora HOM05D007603 ORTHO05D009604 1.3e-23 114.8 184 46.7
Aqoxy1G02256 Aquilegia oxysepala HOM05D007603 ORTHO05D009604 6.2e-23 112.5 247 43.7
HanXRQChr08g0231781 Helianthus annuus HOM05D007603 ORTHO05D009604 6.2e-23 112.5 217 51.2
CAN.G1543.2 Capsicum annuum HOM05D007603 ORTHO05D009604 3.1e-22 110.2 120 58.3
DCAR_013048 Daucus carota HOM05D007603 ORTHO05D009604 5.3e-22 109.4 231 42.0
Glyma.13G293400 Glycine max HOM05D007603 ORTHO05D009604 2.0e-21 107.5 219 51.6
Gohir.A03G153900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 2.6e-21 107.1 227 40.1
Phvul.005G099400 Phaseolus vulgaris HOM05D007603 ORTHO05D009604 3.4e-21 106.7 213 46.0
Gohir.D02G176900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 4.5e-21 106.3 228 39.9
CsaV3_7G003160 Cucumis sativus L. HOM05D007603 ORTHO05D009604 5.8e-21 105.9 172 41.3
PSO541G0270 Papaver somniferum HOM05D007603 ORTHO05D009604 5.8e-21 105.9 249 39.0
Prupe.3G128600 Prunus persica HOM05D007603 ORTHO05D009604 2.2e-20 104.0 232 42.7
Cpa.g.sc50.10 Carica papaya HOM05D007603 ORTHO05D009604 6.5e-20 102.4 253 45.1
Lalb_Chr14g0367241 Lupinus albus HOM05D007603 ORTHO05D009604 3.2e-19 100.1 225 44.4
Carub.0005s2128 Capsella rubella HOM05D007603 ORTHO05D009604 9.3e-19 98.6 234 38.0
PSO675G7067 Papaver somniferum HOM05D007603 ORTHO05D009604 1.2e-18 98.2 254 40.9
TAR624G0387 Trochodendron aralioides HOM05D007603 ORTHO05D009604 1.2e-18 98.2 150 56.7
Aa31sc35G40 Aethionema arabicum HOM05D007603 ORTHO05D009604 2.1e-18 97.4 192 42.7
TPR.G6485 Trifolium pratense HOM05D007603 ORTHO05D009604 2.7e-18 97.1 220 47.3
BcaB02g07727 Brassica carinata HOM05D007603 ORTHO05D009604 2.3e-17 94.0 184 42.4
MBI06_g00805_MAGBIO Magnolia biondii HOM05D007603 ORTHO05D009604 3.0e-17 93.6 144 49.3
THA.LOC104825256 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 3.0e-17 93.6 184 46.2
Lj3g0007744 Lotus japonicus HOM05D007603 ORTHO05D009604 3.9e-17 93.2 226 44.2
BcaC08g44692 Brassica carinata HOM05D007603 ORTHO05D009604 1.1e-16 91.7 180 43.3
A07p22220 Brassica napus HOM05D007603 ORTHO05D009604 1.1e-16 91.7 182 44.0
C06p22280 Brassica napus HOM05D007603 ORTHO05D009604 1.1e-16 91.7 180 43.3
BolC6t37414H Brassica oleracea HOM05D007603 ORTHO05D009604 1.1e-16 91.7 180 43.3
FAN02G2478 Fragaria x ananassa HOM05D007603 ORTHO05D009604 1.9e-16 90.9 221 39.4
Medtr2g090770 Medicago truncatula HOM05D007603 ORTHO05D009604 1.9e-16 90.9 216 37.5
THA.LOC104823514 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 2.5e-16 90.5 251 39.0
AUR62036075 Chenopodium quinoa HOM05D007603 ORTHO05D009604 3.3e-16 90.1 127 49.6
Psat5g274200 Pisum sativum HOM05D007603 ORTHO05D009604 4.3e-16 89.7 212 42.0
AL5G35760 Arabidopsis lyrata HOM05D007603 ORTHO05D009604 7.4e-16 89.0 185 49.7
A09p47630 Brassica napus HOM05D007603 ORTHO05D009604 9.7e-16 88.6 185 50.8
FAN14G3046 Fragaria x ananassa HOM05D007603 ORTHO05D016291 1.3e-15 88.2 172 42.4
BraA07t29901Z Brassica rapa HOM05D007603 ORTHO05D009604 1.6e-15 87.8 180 42.8
BcaC07g39795 Brassica carinata HOM05D007603 ORTHO05D009604 2.2e-15 87.4 186 50.0
AUR62043430 Chenopodium quinoa HOM05D007603 ORTHO05D009604 3.7e-15 86.7 132 47.0
Thhalv10010720m.g Eutrema salsugineum HOM05D007603 ORTHO05D009604 6.3e-15 85.9 191 40.3
Hund07856 Selenicereus undatus HOM05D007603 ORTHO05D009604 6.3e-15 85.9 94 56.4
Sp5g07770 Schrenkiella parvula HOM05D007603 ORTHO05D009604 8.2e-15 85.5 198 37.9
EL10Ac9g20838 Beta vulgaris HOM05D007603 ORTHO05D009604 2.4e-14 84.0 228 46.9
CDE10G0532 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 6.9e-14 82.4 225 36.0
AT3G54680 Arabidopsis thaliana HOM05D007603 ORTHO05D009604 1.2e-13 81.6 187 42.8
Hund01003 Selenicereus undatus HOM05D007603 ORTHO05D009604 2.0e-13 80.9 248 32.7
BcaB01g00169 Brassica carinata HOM05D007603 ORTHO05D009604 3.4e-13 80.1 177 46.9
CARHR164600 Cardamine hirsuta HOM05D007603 ORTHO05D009604 3.4e-13 80.1 145 45.5
C08p29830 Brassica napus HOM05D007603 ORTHO05D009604 4.5e-13 79.7 178 49.4
unitig_749.g13962 Utricularia gibba HOM05D007603 ORTHO05D009604 8.5e-12 75.5 215 33.0
CDE10G1214 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 1.4e-11 74.7 219 32.9
Rhsim06G0135700 Rhododendron simsii HOM05D007603 ORTHO05D009604 4.6e-10 69.7 109 57.8
BolC8t50594H Brassica oleracea HOM05D007603 ORTHO05D009604 6.7e-09 65.9 178 46.1


User provided reference genes

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