Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39731 Davidia involucrata HOM05D003691 ORTHO05D004288 0.0e+00 1349.7 671 100.0
Dinv08745 Davidia involucrata HOM05D003691 ORTHO05D004288 0.0e+00 1110.1 663 86.0
Hma1.2p1_0895F.1_g233770 Hydrangea macrophylla HOM05D003691 ORTHO05D004288 1.5e-305 1052.4 669 79.8
GSVIVG01030475001 Vitis vinifera HOM05D003691 ORTHO05D004288 9.8e-289 996.5 671 76.3
vmacro09345 Vaccinium macrocarpon HOM05D003691 ORTHO05D004288 3.4e-281 971.5 686 73.0
Rhsim04G0052200 Rhododendron simsii HOM05D003691 ORTHO05D004288 1.3e-277 959.5 684 72.8
Haze_12800 Corylus avellana HOM05D003691 ORTHO05D004288 7.3e-276 953.7 677 72.4
CiPaw.03G157800 Carya illinoinensis HOM05D003691 ORTHO05D004288 8.9e-274 946.8 666 74.0
TWI75G0495 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 1.9e-268 929.1 661 72.0
TAR624G0007 Trochodendron aralioides HOM05D003691 ORTHO05D004288 1.9e-268 929.1 664 72.6
Manes.04G099700 Manihot esculenta HOM05D003691 ORTHO05D004288 1.2e-267 926.4 670 70.4
TWI36G1355 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 1.1e-266 923.3 663 71.9
QL08p031532 Quercus lobata HOM05D003691 ORTHO05D004288 4.4e-265 917.9 667 72.9
Atru.chr6.3228 Acer truncatum HOM05D003691 ORTHO05D004288 6.6e-261 904.0 671 70.5
Duzib138G0684 Durio zibethinus HOM05D003691 ORTHO05D004288 5.8e-257 891.0 667 70.6
MD09G1071300 Malus domestica HOM05D003691 ORTHO05D004288 3.8e-256 888.3 663 69.4
Thecc.01G178100 Theobroma cacao HOM05D003691 ORTHO05D004288 8.4e-256 887.1 673 69.5
Potri.014G155900 Populus trichocarpa HOM05D003691 ORTHO05D004288 5.4e-255 884.4 664 69.6
Prupe.3G213700 Prunus persica HOM05D003691 ORTHO05D004288 1.6e-254 882.9 666 70.0
Sabra14G0117900 Salix brachista HOM05D003691 ORTHO05D004288 6.0e-254 880.9 665 69.2
ClCG02G009060 Citrullus lanatus HOM05D003691 ORTHO05D004288 3.0e-253 878.6 664 67.8
TAR626G1388 Trochodendron aralioides HOM05D003691 ORTHO05D004288 5.1e-253 877.9 597 74.9
Sed0022442 Sechium edule HOM05D003691 ORTHO05D004288 4.3e-252 874.8 664 67.0
FAN14G5114 Fragaria x ananassa HOM05D003691 ORTHO05D004288 6.2e-251 870.9 667 68.7
Lj8A127T48 Lonicera japonica HOM05D003691 ORTHO05D004288 1.1e-250 870.2 582 74.7
FAN05G1959 Fragaria x ananassa HOM05D003691 ORTHO05D004288 3.1e-250 868.6 669 68.3
Nn1g03443 Nelumbo nucifera HOM05D003691 ORTHO05D004288 9.0e-250 867.1 679 67.6
Duzib211G0477 Durio zibethinus HOM05D003691 ORTHO05D004288 1.2e-249 866.7 665 69.2
FAN09G0430 Fragaria x ananassa HOM05D003691 ORTHO05D004288 3.8e-248 861.7 669 67.7
FvH4_6g42730 Fragaria vesca HOM05D003691 ORTHO05D004288 6.4e-248 860.9 677 67.5
Gohir.D07G088400 Gossypium hirsutum HOM05D003691 ORTHO05D004288 1.1e-247 860.1 665 68.7
RcHm_v2.0_Chr2g0158621 Rosa chinensis HOM05D003691 ORTHO05D004288 5.5e-247 857.8 666 68.0
CsaV3_2G034670 Cucumis sativus L. HOM05D003691 ORTHO05D004288 1.2e-246 856.7 664 66.3
Ciclev10014542m.g Citrus clementina HOM05D003691 ORTHO05D004288 4.6e-246 854.7 670 68.1
Gorai.001G094600 Gossypium raimondii HOM05D003691 ORTHO05D004288 1.0e-245 853.6 675 67.4
Gohir.A07G081900 Gossypium hirsutum HOM05D003691 ORTHO05D004288 1.3e-245 853.2 675 67.3
MELO3C019300.2 Cucumis melo HOM05D003691 ORTHO05D004288 4.3e-244 848.2 664 66.3
Oeu027232.1 Olea europaea HOM05D003691 ORTHO05D004288 4.3e-244 848.2 661 67.0
Migut.M00432 Erythranthe guttata HOM05D003691 ORTHO05D004288 6.2e-243 844.3 675 66.4
MBI07_g01730_MAGBIO Magnolia biondii HOM05D003691 ORTHO05D004288 1.1e-242 843.6 649 67.6
CANSAT64G0165 Cannabis sativa HOM05D003691 ORTHO05D004288 4.0e-242 841.6 662 65.9
FAN02G0990 Fragaria x ananassa HOM05D003691 ORTHO05D004288 9.0e-242 840.5 671 66.8
PGR042G1566 Punica granatum HOM05D003691 ORTHO05D004288 5.8e-241 837.8 673 67.0
DCAR_019753 Daucus carota HOM05D003691 ORTHO05D004288 3.5e-238 828.6 661 65.2
PSO210G5093 Papaver somniferum HOM05D003691 ORTHO05D004288 7.9e-238 827.4 659 65.9
Lalb_Chr03g0028581 Lupinus albus HOM05D003691 ORTHO05D004288 1.0e-237 827.0 677 64.5
Sopen07g025100 Solanum pennellii HOM05D003691 ORTHO05D004288 3.7e-235 818.5 664 64.2
Solyc07g049680.4 Solanum lycopersicum HOM05D003691 ORTHO05D004288 2.4e-234 815.8 664 64.0
Eucgr.A01107 Eucalyptus grandis HOM05D003691 ORTHO05D004288 2.6e-233 812.4 673 64.8
MSTRG.14857 Avicennia marina HOM05D003691 ORTHO05D004288 4.5e-233 811.6 667 64.0
arahy.Tifrunner.gnm1.ann1.AS5DTW Arachis hypogaea HOM05D003691 ORTHO05D004288 1.0e-232 810.4 671 64.2
DCAR_021155 Daucus carota HOM05D003691 ORTHO05D004288 1.0e-232 810.4 662 65.0
Nitab4.5_0015742g0010 Nicotiana tabacum HOM05D003691 ORTHO05D004288 2.9e-232 808.9 674 63.1
Nitab4.5_0000130g0240 Nicotiana tabacum HOM05D003691 ORTHO05D004288 6.5e-232 807.7 674 62.9
arahy.Tifrunner.gnm1.ann1.4D79G7 Arachis hypogaea HOM05D003691 ORTHO05D004288 8.5e-232 807.4 671 64.1
Cc05_g03670 Coffea canephora HOM05D003691 ORTHO05D004288 2.7e-230 802.4 708 63.3
Lj3g0007999 Lotus japonicus HOM05D003691 ORTHO05D004288 2.7e-230 802.4 672 63.1
SGA_v2.0_scaffold70G23393 Striga asiatica HOM05D003691 ORTHO05D004288 1.8e-229 799.7 672 64.7
PGSC0003DMG400001077 Solanum tuberosum HOM05D003691 ORTHO05D004288 3.0e-229 798.9 661 63.5
Sc12g0002210 Simmondsia chinensis HOM05D003691 ORTHO05D004288 8.8e-229 797.3 683 63.1
THA.LOC104816038 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 2.2e-227 792.7 669 63.7
ECA240G1119 Erigeron canadensis HOM05D003691 ORTHO05D004288 4.1e-226 788.5 665 62.0
CAN.G290.10 Capsicum annuum HOM05D003691 ORTHO05D004288 1.2e-225 786.9 663 62.7
Glyma.06G308100 Glycine max HOM05D003691 ORTHO05D004288 4.5e-225 785.0 676 61.5
QL08p006881 Quercus lobata HOM05D003691 ORTHO05D004288 7.7e-225 784.3 663 63.0
ECA236G1051 Erigeron canadensis HOM05D003691 ORTHO05D004288 1.0e-224 783.9 670 63.3
Medtr4g050060 Medicago truncatula HOM05D003691 ORTHO05D004288 1.7e-224 783.1 677 62.0
AL4G27990 Arabidopsis lyrata HOM05D003691 ORTHO05D004288 1.4e-223 780.0 677 61.7
TPR.G4630 Trifolium pratense HOM05D003691 ORTHO05D004288 7.2e-223 777.7 687 60.8
Aqoxy1G03453 Aquilegia oxysepala HOM05D003691 ORTHO05D004288 2.1e-222 776.2 671 62.0
Glyma.12G096700 Glycine max HOM05D003691 ORTHO05D004288 4.7e-222 775.0 672 61.5
Phvul.011G101300 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 7.9e-222 774.2 670 61.3
Thhalv10016359m.g Eutrema salsugineum HOM05D003691 ORTHO05D004288 8.8e-221 770.8 676 61.5
CARHR126440 Cardamine hirsuta HOM05D003691 ORTHO05D004288 1.5e-220 770.0 682 60.6
Cfa020301 Carpinus fangiana HOM05D003691 ORTHO05D004288 2.0e-220 769.6 665 62.9
Sp4g14920 Schrenkiella parvula HOM05D003691 ORTHO05D004288 2.0e-220 769.6 676 61.4
Carub.0004s1392 Capsella rubella HOM05D003691 ORTHO05D004288 9.7e-220 767.3 675 61.3
HanXRQChr04g0126971 Helianthus annuus HOM05D003691 ORTHO05D004288 9.7e-220 767.3 672 62.5
AT2G32590 Arabidopsis thaliana HOM05D003691 ORTHO05D004288 1.7e-219 766.5 678 60.9
A04p25040 Brassica napus HOM05D003691 ORTHO05D004288 4.1e-218 761.9 676 61.8
BraA04t18015Z Brassica rapa HOM05D003691 ORTHO05D004288 5.3e-218 761.5 676 61.8
VMungo1127G0496 Vigna mungo HOM05D003691 ORTHO05D004288 7.0e-218 761.1 671 61.1
CSS0013476 Camellia sinensis var. sinensis HOM05D003691 ORTHO05D004288 9.1e-218 760.8 500 75.6
Prupe.4G220400 Prunus persica HOM05D003691 ORTHO05D004288 9.1e-218 760.8 671 60.7
SalBow7G1078 Salvia bowleyana HOM05D003691 ORTHO05D004288 9.1e-218 760.8 691 60.3
A05p13290 Brassica napus HOM05D003691 ORTHO05D004288 1.0e-216 757.3 678 60.5
Thecc.07G031000 Theobroma cacao HOM05D003691 ORTHO05D004288 5.0e-216 755.0 665 61.4
Lsat_1_v5_gn_7_93200 Lactuca sativa HOM05D003691 ORTHO05D004288 1.4e-215 753.4 670 62.1
BraA05t20270Z Brassica rapa HOM05D003691 ORTHO05D004288 9.4e-215 750.7 679 60.4
Phvul.005G116900 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 1.2e-214 750.4 671 59.9
Psat7g203760 Pisum sativum HOM05D003691 ORTHO05D004288 6.1e-214 748.0 673 60.8
C04p17080 Brassica napus HOM05D003691 ORTHO05D004288 3.0e-213 745.7 678 59.4
THA.LOC104826143 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 3.9e-213 745.3 685 59.7
Atru.chr2.3500 Acer truncatum HOM05D003691 ORTHO05D004288 4.8e-211 738.4 674 60.1
Glyma.12G191300 Glycine max HOM05D003691 ORTHO05D004288 1.8e-210 736.5 680 59.0
BolC4t23260H Brassica oleracea HOM05D003691 ORTHO05D004288 3.1e-210 735.7 693 58.2
Aa31LG5G4740 Aethionema arabicum HOM05D003691 ORTHO05D004288 1.3e-208 730.3 674 59.8
VMungo1080G0849 Vigna mungo HOM05D003691 ORTHO05D004288 2.2e-208 729.6 674 58.5
Peaxi162Scf00007g00129 Petunia axillaris HOM05D003691 ORTHO05D004288 6.5e-208 728.0 667 59.1
Ca_19493_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 7.2e-207 724.5 677 58.6
Lsat_1_v5_gn_9_106740 Lactuca sativa HOM05D003691 ORTHO05D004288 1.8e-205 719.9 666 59.0
Hund02023 Selenicereus undatus HOM05D003691 ORTHO05D004288 1.7e-203 713.4 714 56.9
TPR.G4243 Trifolium pratense HOM05D003691 ORTHO05D004288 1.4e-202 710.3 687 57.8
Medtr2g087880 Medicago truncatula HOM05D003691 ORTHO05D004288 5.3e-202 708.4 670 57.9
Psat5g261240 Pisum sativum HOM05D003691 ORTHO05D004288 9.1e-202 707.6 667 58.8
EL10Ac4g07751 Beta vulgaris HOM05D003691 ORTHO05D004288 1.5e-199 700.3 682 55.6
Ca_01616_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 2.7e-198 696.0 697 56.4
Haze_09719 Corylus avellana HOM05D003691 ORTHO05D004288 6.1e-198 694.9 730 54.9
ATR0317G123 Amborella trichopoda HOM05D003691 ORTHO05D004288 9.8e-196 687.6 661 56.7
LjContig00274_ERROPOS1100000g0006521 Lotus japonicus HOM05D003691 ORTHO05D004288 7.0e-194 681.4 599 61.1
Ciclev10007620m.g Citrus clementina HOM05D003691 ORTHO05D004288 1.6e-193 680.2 702 55.3
AUR62015833 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.3e-192 677.2 697 55.5
Cpa.g.sc87.104 Carica papaya HOM05D003691 ORTHO05D004288 1.2e-188 664.1 517 67.5
RcHm_v2.0_Chr5g0041001 Rosa chinensis HOM05D003691 ORTHO05D004288 5.4e-186 655.2 656 55.3
FvH4_3g23280 Fragaria vesca HOM05D003691 ORTHO05D004288 1.3e-184 650.6 649 55.8
HPP92_023149 Vanilla planifolia HOM05D003691 ORTHO05D004288 6.6e-184 648.3 654 55.4
Ah.06g182530 Amaranthus hybridus HOM05D003691 ORTHO05D004288 5.6e-183 645.2 686 54.1
MD11G1212100 Malus domestica HOM05D003691 ORTHO05D004288 1.6e-182 643.7 667 53.7
FAN21G2044 Fragaria x ananassa HOM05D003691 ORTHO05D004288 9.5e-175 617.8 649 54.2
BcaB06g28606 Brassica carinata HOM05D003691 ORTHO05D004288 4.7e-174 615.5 679 53.9
GSVIVG01037701001 Vitis vinifera HOM05D003691 ORTHO05D004288 3.1e-173 612.8 644 54.2
Zm00001eb162990 Zea mays HOM05D003691 ORTHO05D004288 4.0e-173 612.5 648 52.2
CiPaw.11G193000 Carya illinoinensis HOM05D003691 ORTHO05D004288 1.6e-169 600.5 513 63.0
BcaB06g28605 Brassica carinata HOM05D003691 ORTHO05D004288 6.0e-169 598.6 636 55.2
BcaB02g10460 Brassica carinata HOM05D003691 ORTHO05D004288 2.5e-167 593.2 511 62.6
Hund02022 Selenicereus undatus HOM05D003691 ORTHO05D004288 1.7e-163 580.5 680 49.3
Dinv22243 Davidia involucrata HOM05D003691 ORTHO05D004288 3.9e-160 569.3 551 58.8
Hund02025 Selenicereus undatus HOM05D003691 ORTHO05D004288 1.5e-159 567.4 686 49.4
FAN11G2344 Fragaria x ananassa HOM05D003691 ORTHO05D004288 5.2e-157 558.9 615 52.2
COL.COLO4_09704 Corchorus olitorius HOM05D003691 ORTHO05D004288 3.0e-152 543.1 504 60.1
AUR62020387 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.2e-148 531.2 681 48.3
BolC4t27689H Brassica oleracea HOM05D003691 ORTHO05D004288 1.5e-148 530.8 532 56.2
unitig_60.g25819 Utricularia gibba HOM05D003691 ORTHO05D004288 7.1e-146 521.9 675 47.3
Actinidia10811 Actinidia chinensis HOM05D003691 ORTHO05D004288 9.3e-138 495.0 443 63.7
Gohir.A07G186000 Gossypium hirsutum HOM05D003691 ORTHO05D004288 1.6e-137 494.2 441 61.0
C04p62100 Brassica napus HOM05D003691 ORTHO05D004288 1.3e-134 484.6 463 59.8
Lj8A171G44 Lonicera japonica HOM05D003691 ORTHO05D004288 5.5e-130 469.2 488 54.1
BcaC02g07908 Brassica carinata HOM05D003691 ORTHO05D004288 1.0e-128 464.9 655 46.1
SEGI_30766 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 5.5e-122 442.6 624 44.2
Pp3c11_22430 Physcomitrium patens HOM05D003691 ORTHO05D004288 7.9e-121 438.7 692 43.2
AUR62015832 Chenopodium quinoa HOM05D003691 ORTHO05D004288 2.3e-120 437.2 595 45.2
Mapoly0002s0133 Marchantia polymorpha HOM05D003691 ORTHO05D004288 2.6e-116 423.7 703 40.4
AagrBONN_evm.TU.Sc2ySwM_228.2537 Anthoceros agrestis HOM05D003691 ORTHO05D004288 6.1e-113 412.5 701 40.7
Lalb_Chr19g0136071 Lupinus albus HOM05D003691 ORTHO05D004288 8.2e-110 402.1 373 60.1
SEGI_37895 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 1.3e-107 394.8 570 44.6
MD03G1195700 Malus domestica HOM05D003691 ORTHO05D004288 3.9e-104 383.3 407 48.9
Lalb_Chr19g0136061 Lupinus albus HOM05D003691 ORTHO05D004288 1.5e-103 381.3 287 64.1
AUR62020385 Chenopodium quinoa HOM05D003691 ORTHO05D004288 2.0e-103 380.9 339 63.7
Oeu036739.1 Olea europaea HOM05D003691 ORTHO05D004288 6.5e-99 365.9 270 74.8
FAN25G2100 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.5e-95 354.8 291 66.0
CBR_g26183 Chara braunii HOM05D003691 ORTHO05D004288 1.3e-94 351.7 798 34.7
Pp3c7_4280 Physcomitrium patens HOM05D003691 ORTHO05D004288 2.1e-89 334.3 696 37.5
SHI10368 Sapria himalayana HOM05D003691 ORTHO05D004288 9.1e-85 318.9 408 47.5
FAN25G2879 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.4e-72 278.5 338 47.3
Os01g0532800 Oryza sativa ssp. japonica HOM05D003691 ORTHO05D004288 6.8e-72 276.2 297 48.8
MD17G1101300 Malus domestica HOM05D003691 ORTHO05D004288 2.0e-71 274.6 260 61.9
MCO04G245 Micromonas commoda HOM05D003691 ORTHO05D004288 7.8e-68 262.7 695 34.1
Actinidia10812 Actinidia chinensis HOM05D003691 ORTHO05D004288 1.0e-67 262.3 218 61.5
PRCOL_00002032 Prasinoderma coloniale HOM05D003691 ORTHO05D004288 3.4e-63 247.3 609 34.3
CDE09G1127 Ceratophyllum demersum HOM05D003691 ORTHO05D004288 4.7e-49 200.3 235 54.9
Cfa026695 Carpinus fangiana HOM05D003691 ORTHO05D004288 9.9e-47 192.6 789 28.0
Sed0010458 Sechium edule HOM05D003691 ORTHO05D004288 5.1e-43 180.3 245 44.1
Lj8A171G43 Lonicera japonica HOM05D003691 ORTHO05D004288 2.2e-38 164.9 147 59.2
C04p62090 Brassica napus HOM05D003691 ORTHO05D004288 4.6e-28 130.6 130 53.8
MD03G1195600 Malus domestica HOM05D003691 ORTHO05D004288 7.9e-28 129.8 164 47.6
Dinv17119 Davidia involucrata HOM05D003691 ORTHO05D004288 3.4e-23 114.4 80 76.2
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 6.4e-22 110.2 79 70.9
CAN.G574.39 Capsicum annuum HOM05D003691 ORTHO05D004288 9.3e-21 106.3 86 61.6
arahy.Tifrunner.gnm1.ann1.NAA2I0 Arachis hypogaea HOM05D003691 ORTHO05D004288 1.0e-19 102.8 61 83.6
SEGI_16706 Sequoiadendron giganteum HOM05D003691 ORTHO05D017750 2.3e-19 101.7 114 53.5
ATR0772G025 Amborella trichopoda HOM05D003691 ORTHO05D004288 1.6e-17 95.5 106 46.2
Dinv01749 Davidia involucrata HOM05D003691 ORTHO05D004288 2.8e-17 94.7 47 95.7
Rhsim07G0255900 Rhododendron simsii HOM05D000234 ORTHO05D004288 2.8e-17 94.7 128 45.3
CAN.G574.40 Capsicum annuum HOM05D003691 ORTHO05D004288 2.4e-16 91.7 68 64.7
Dinv18681 Davidia involucrata HOM05D003691 ORTHO05D004288 3.1e-16 91.3 48 89.6
EL10Ac4g08622 Beta vulgaris HOM05D003691 ORTHO05D019836 2.0e-15 88.6 59 71.2
Lj8A127T49 Lonicera japonica HOM05D003691 ORTHO05D004288 2.6e-15 88.2 81 65.4
SHI10371 Sapria himalayana HOM05D003691 ORTHO05D004288 3.4e-15 87.8 95 61.1
SEGI_15855 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 1.0e-14 86.3 111 47.7
FAN16G1928 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.1e-13 82.8 90 51.1
MD17G1101200 Malus domestica HOM05D003691 ORTHO05D004288 3.2e-13 81.3 90 50.0
TPR.G2961 Trifolium pratense HOM05D001978 ORTHO05D003036 1.6e-12 79.0 66 56.1
TPR.G35222 Trifolium pratense HOM05D003691 ORTHO05D004288 6.0e-12 77.0 59 61.0
Actinidia03601 Actinidia chinensis HOM05D003691 ORTHO05D004288 7.9e-12 76.6 51 74.5
Glyma.13G310451 Glycine max HOM05D003691 ORTHO05D004288 1.1e-10 72.8 50 64.0
SHI10370 Sapria himalayana HOM05D000105 ORTHO05D000023 1.3e-09 69.3 60 60.0
MD17G1101000 Malus domestica HOM05D003691 ORTHO05D004288 1.4e-08 65.9 46 63.0


User provided reference genes

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