Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39692 Davidia involucrata HOM05D020552 ORTHO05D001151 2.8e-25 117.9 60 100.0
Haze_12888 Corylus avellana HOM05D000008 ORTHO05D001151 3.4e-15 84.3 52 82.7
Dinv02742 Davidia involucrata HOM05D000008 ORTHO05D001151 2.9e-14 81.3 52 82.7
CSS0001340 Camellia sinensis var. sinensis HOM05D020552 ORTHO05D001151 3.7e-14 80.9 47 91.5
Rhsim06G0159100 Rhododendron simsii HOM05D000008 ORTHO05D001151 4.9e-14 80.5 52 78.8
Potri.017G037000 Populus trichocarpa HOM05D000008 ORTHO05D001151 2.4e-13 78.2 52 82.7
Prupe.3G219200 Prunus persica HOM05D000008 ORTHO05D001151 2.4e-13 78.2 52 82.7
Manes.13G072300 Manihot esculenta HOM05D000008 ORTHO05D001151 4.1e-13 77.4 52 80.8
QL08p033621 Quercus lobata HOM05D000008 ORTHO05D001151 5.4e-13 77.0 52 78.8
Hma1.2p1_0613F.1_g189090 Hydrangea macrophylla HOM05D000008 ORTHO05D001151 7.1e-13 76.6 52 75.0
vmacro12223 Vaccinium macrocarpon HOM05D000008 ORTHO05D001151 9.2e-13 76.3 53 77.4
Actinidia39285 Actinidia chinensis HOM05D000008 ORTHO05D001151 2.7e-12 74.7 52 80.8
FAN05G2626 Fragaria x ananassa HOM05D000008 ORTHO05D001151 2.7e-12 74.7 52 76.9
FAN09G0221 Fragaria x ananassa HOM05D000008 ORTHO05D001151 2.7e-12 74.7 52 76.9
Nn1g03626 Nelumbo nucifera HOM05D000008 ORTHO05D001151 2.7e-12 74.7 52 80.8
Potri.007G122800 Populus trichocarpa HOM05D000008 ORTHO05D001151 2.7e-12 74.7 52 78.8
RcHm_v2.0_Chr2g0159921 Rosa chinensis HOM05D000008 ORTHO05D001151 2.7e-12 74.7 52 76.9
FAN14G3065 Fragaria x ananassa HOM05D000008 ORTHO05D001151 7.8e-12 73.2 52 75.0
FAN14G3112 Fragaria x ananassa HOM05D000008 ORTHO05D001151 7.8e-12 73.2 52 75.0
CiPaw.03G162100 Carya illinoinensis HOM05D000008 ORTHO05D001151 1.7e-11 72.0 52 76.9
Duzib268G0615 Durio zibethinus HOM05D000008 ORTHO05D001151 3.0e-11 71.2 52 80.8
GSVIVG01030609001 Vitis vinifera HOM05D000008 ORTHO05D001151 3.9e-11 70.9 52 78.8
Sabra07G0099400 Salix brachista HOM05D000008 ORTHO05D001151 8.6e-11 69.7 52 75.0
Eucgr.A01720 Eucalyptus grandis HOM05D000008 ORTHO05D001151 1.9e-10 68.6 52 73.1
PGR004G0365 Punica granatum HOM05D000008 ORTHO05D001151 1.9e-10 68.6 52 71.2
Atru.chr6.3160 Acer truncatum HOM05D000008 ORTHO05D001151 2.5e-10 68.2 56 73.2
COL.COLO4_27684 Corchorus olitorius HOM05D000008 ORTHO05D001151 4.3e-10 67.4 54 74.1
Thecc.02G312700 Theobroma cacao HOM05D000008 ORTHO05D001151 4.3e-10 67.4 52 76.9
CSS0039428 Camellia sinensis var. sinensis HOM05D000008 ORTHO05D001151 5.6e-10 67.0 52 67.3
Actinidia30515 Actinidia chinensis HOM05D000008 ORTHO05D001151 9.5e-10 66.2 53 77.4
TAR627G1133 Trochodendron aralioides HOM05D020552 ORTHO05D000037 1.2e-09 65.9 48 83.3
Dinv20020 Davidia involucrata HOM05D000008 ORTHO05D001151 1.6e-09 65.5 52 67.3
Thecc.07G051100 Theobroma cacao HOM05D000008 ORTHO05D001151 2.8e-09 64.7 52 61.5
Duzib251G0940 Durio zibethinus HOM05D000008 ORTHO05D001151 1.1e-08 62.8 55 74.5
Rhsim02G0111800 Rhododendron simsii HOM05D000008 ORTHO05D001151 1.1e-08 62.8 61 55.7
GSVIVG01012633001 Vitis vinifera HOM05D000008 ORTHO05D001151 1.1e-08 62.8 52 63.5
CSS0033018 Camellia sinensis var. sinensis HOM05D000008 ORTHO05D001151 1.4e-08 62.4 53 67.9
CiPaw.11G184800 Carya illinoinensis HOM05D000008 ORTHO05D001151 1.4e-08 62.4 56 58.9
MBI02_g21863_MAGBIO Magnolia biondii HOM05D000008 ORTHO05D001151 1.4e-08 62.4 52 69.2
Dinv17830 Davidia involucrata HOM05D000008 ORTHO05D001151 2.3e-08 61.6 52 67.3
Duzib235G0636 Durio zibethinus HOM05D000008 ORTHO05D001151 2.3e-08 61.6 52 65.4
Potri.011G026300 Populus trichocarpa HOM05D000008 ORTHO05D001151 2.3e-08 61.6 52 65.4
Haze_09624 Corylus avellana HOM05D000008 ORTHO05D001151 3.1e-08 61.2 53 62.3
Duzib160G0189 Durio zibethinus HOM05D000008 ORTHO05D001151 5.2e-08 60.5 52 61.5
Gohir.A01G075400 Gossypium hirsutum HOM05D000008 ORTHO05D001151 5.2e-08 60.5 54 59.3
Hma1.2p1_2714F.1_g327420 Hydrangea macrophylla HOM05D000008 ORTHO05D001151 5.2e-08 60.5 53 62.3
vmacro11760 Vaccinium macrocarpon HOM05D000008 ORTHO05D001151 5.2e-08 60.5 52 69.2
Cfa014430 Carpinus fangiana HOM05D001264 ORTHO05D001167 6.8e-08 60.1 34 85.3
Sabra11G0016900 Salix brachista HOM05D000008 ORTHO05D001151 8.9e-08 59.7 52 65.4
Actinidia09923 Actinidia chinensis HOM05D000008 ORTHO05D001151 1.2e-07 59.3 52 69.2
Thecc.06G214500 Theobroma cacao HOM05D000008 ORTHO05D001151 1.2e-07 59.3 52 63.5
CiPaw.12G126900 Carya illinoinensis HOM05D000008 ORTHO05D001151 2.6e-07 58.2 52 57.7
Sabra17G0024200 Salix brachista HOM05D000008 ORTHO05D001151 2.6e-07 58.2 52 65.4
TAR626G1685 Trochodendron aralioides HOM05D000008 ORTHO05D001151 2.6e-07 58.2 52 67.3
Gohir.A12G156200 Gossypium hirsutum HOM05D000008 ORTHO05D001151 3.4e-07 57.8 52 65.4
Gohir.D01G062700 Gossypium hirsutum HOM05D000008 ORTHO05D001151 3.4e-07 57.8 54 55.6
Gorai.002G083400 Gossypium raimondii HOM05D000008 ORTHO05D001151 3.4e-07 57.8 54 55.6
Sabra04G0011800 Salix brachista HOM05D000008 ORTHO05D001151 4.4e-07 57.4 78 44.9
TPR.G19035 Trifolium pratense HOM05D000008 ORTHO05D001151 4.4e-07 57.4 52 61.5
QL93p0073_0483 Quercus lobata HOM05D000008 ORTHO05D001151 7.6e-07 56.6 52 57.7
FAN02G3670 Fragaria x ananassa HOM05D000008 ORTHO05D001151 9.9e-07 56.2 52 61.5
QL05p074951 Quercus lobata HOM05D000008 ORTHO05D001151 1.3e-06 55.8 52 57.7
Lj3g0022338 Lotus japonicus HOM05D000008 ORTHO05D001151 1.7e-06 55.5 52 65.4
PSO541G6179 Papaver somniferum HOM05D000008 ORTHO05D001151 1.7e-06 55.5 52 59.6
FvH4_6g43450 Fragaria vesca HOM05D000008 ORTHO05D001151 2.2e-06 55.1 35 74.3
Gohir.D12G159301 Gossypium hirsutum HOM05D000008 ORTHO05D001151 2.2e-06 55.1 52 63.5
Gorai.008G172400 Gossypium raimondii HOM05D000008 ORTHO05D001151 2.2e-06 55.1 52 63.5
Nn1g07130 Nelumbo nucifera HOM05D000008 ORTHO05D001151 2.2e-06 55.1 52 63.5
Lsat_1_v5_gn_4_68300 Lactuca sativa HOM05D000008 ORTHO05D001151 2.9e-06 54.7 53 60.4
Psat0s785g0040 Pisum sativum HOM05D000008 ORTHO05D001151 2.9e-06 54.7 52 57.7
Potri.004G021300 Populus trichocarpa HOM05D000008 ORTHO05D001151 2.9e-06 54.7 52 59.6
PGR042G1777 Punica granatum HOM05D000008 ORTHO05D001151 2.9e-06 54.7 49 63.3
Gohir.A06G208000 Gossypium hirsutum HOM05D000008 ORTHO05D001151 3.7e-06 54.3 56 55.4
Nn1g07041 Nelumbo nucifera HOM05D000008 ORTHO05D001151 3.7e-06 54.3 52 63.5
PSO675G1663 Papaver somniferum HOM05D000008 ORTHO05D001151 3.7e-06 54.3 52 61.5
Prupe.4G025800 Prunus persica HOM05D000008 ORTHO05D001151 3.7e-06 54.3 48 64.6
CiPaw.10G070900 Carya illinoinensis HOM05D000008 ORTHO05D001151 4.9e-06 53.9 50 58.0
TWI38G1835 Tripterygium wilfordii HOM05D000008 ORTHO05D001151 4.9e-06 53.9 52 53.8
SEGI_40119 Sequoiadendron giganteum HOM05D000008 ORTHO05D001151 6.4e-06 53.5 52 51.9
Gohir.D06G213100 Gossypium hirsutum HOM05D000008 ORTHO05D001151 8.4e-06 53.1 56 53.6
Gorai.010G253000 Gossypium raimondii HOM05D000008 ORTHO05D001151 8.4e-06 53.1 56 53.6


User provided reference genes

Program Settings