Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 2.9e-73 278.5 142 100.0
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 1.1e-40 170.2 142 65.5
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 3.2e-40 168.7 142 67.6
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 1.6e-39 166.4 127 71.7
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 1.6e-39 166.4 141 64.5
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 1.6e-39 166.4 129 70.5
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 2.7e-39 165.6 141 65.2
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 2.2e-36 156.0 141 63.8
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 3.2e-32 142.1 130 62.3
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 4.7e-31 138.3 130 59.2
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 4.7e-31 138.3 119 64.7
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 6.1e-31 137.9 130 58.5
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 8.0e-31 137.5 127 62.2
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 8.0e-31 137.5 130 59.2
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 1.4e-30 136.7 143 57.3
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 1.4e-30 136.7 131 60.3
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 2.3e-30 136.0 112 66.1
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 3.0e-30 135.6 143 55.9
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 6.7e-30 134.4 138 55.8
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 2.0e-29 132.9 132 56.1
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 1.3e-28 130.2 138 52.2
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 2.8e-28 129.0 127 58.3
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 3.7e-28 128.6 131 55.0
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 3.7e-28 128.6 90 74.4
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 8.2e-28 127.5 68 91.2
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 8.2e-28 127.5 130 53.8
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 1.1e-27 127.1 131 57.3
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 1.1e-27 127.1 124 58.9
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 1.4e-27 126.7 141 51.1
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 1.4e-27 126.7 130 57.7
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 2.4e-27 125.9 73 84.9
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 3.1e-27 125.6 129 56.6
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 4.1e-27 125.2 110 63.6
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 4.1e-27 125.2 89 73.0
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 5.3e-27 124.8 133 54.9
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 7.0e-27 124.4 130 58.5
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 7.0e-27 124.4 130 58.5
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 7.0e-27 124.4 131 56.5
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 7.0e-27 124.4 130 57.7
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 1.2e-26 123.6 132 56.1
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 2.7e-26 122.5 142 49.3
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 2.7e-26 122.5 141 51.1
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 2.7e-26 122.5 93 71.0
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 3.5e-26 122.1 145 51.7
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 4.5e-26 121.7 145 51.7
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 4.5e-26 121.7 145 51.7
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 2.9e-25 119.0 142 48.6
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 6.5e-25 117.9 132 53.0
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 8.5e-25 117.5 91 70.3
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 1.1e-24 117.1 141 48.9
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 1.5e-24 116.7 74 83.8
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 1.5e-24 116.7 132 55.3
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 1.9e-24 116.3 91 70.3
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 2.5e-24 115.9 129 51.9
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 3.2e-24 115.5 130 56.2
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 4.2e-24 115.2 112 58.9
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 7.2e-24 114.4 118 55.1
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 9.4e-24 114.0 127 52.8
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 1.2e-23 113.6 127 55.1
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 1.6e-23 113.2 118 55.1
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 1.6e-23 113.2 138 50.0
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 1.4e-22 110.2 130 51.5
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 2.3e-22 109.4 93 62.4
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 2.3e-22 109.4 73 71.2
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 3.0e-22 109.0 88 65.9
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 4.0e-22 108.6 132 50.8
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 6.8e-22 107.8 111 55.9
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 6.8e-22 107.8 111 56.8
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 1.2e-21 107.1 114 51.8
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 2.6e-21 105.9 75 69.3
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 2.6e-21 105.9 143 49.0
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 2.6e-21 105.9 75 70.7
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 5.7e-21 104.8 94 62.8
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 5.7e-21 104.8 94 62.8
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 5.7e-21 104.8 131 48.9
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 5.7e-21 104.8 90 61.1
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 5.7e-21 104.8 91 60.4
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 7.5e-21 104.4 94 62.8
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 7.5e-21 104.4 94 62.8
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 7.5e-21 104.4 85 63.5
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 7.5e-21 104.4 141 45.4
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 9.8e-21 104.0 93 62.4
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 1.3e-20 103.6 100 56.0
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 2.2e-20 102.8 141 44.7
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 2.2e-20 102.8 70 72.9
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 2.8e-20 102.4 126 50.0
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 4.8e-20 101.7 111 53.2
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 8.3e-20 100.9 114 52.6
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 1.4e-19 100.1 61 78.7
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 3.1e-19 99.0 87 60.9
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 5.4e-19 98.2 61 77.0
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 1.2e-18 97.1 65 72.3
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 1.6e-18 96.7 117 51.3
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 1.6e-18 96.7 107 52.3
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 1.6e-18 96.7 71 66.2
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 2.7e-18 95.9 120 52.5
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 3.5e-18 95.5 61 72.1
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 4.5e-18 95.1 124 47.6
Rhsim04G0037200 Rhododendron simsii HOM05D005503 ORTHO05D008949 2.3e-17 92.8 86 61.6
Rhsim04G0170300 Rhododendron simsii HOM05D005503 ORTHO05D008949 2.3e-17 92.8 86 61.6
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 3.8e-17 92.0 67 73.1
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 2.5e-16 89.4 62 67.7
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 4.2e-16 88.6 85 56.5
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 9.5e-16 87.4 110 51.8
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 9.5e-16 87.4 110 51.8
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 2.8e-15 85.9 123 43.9
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 2.3e-14 82.8 57 80.7
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 4.4e-13 78.6 64 57.8
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 4.1e-11 72.0 50 66.0


User provided reference genes

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