Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39657 Davidia involucrata HOM05D005608 ORTHO05D007543 1.3e-136 489.6 231 100.0
QL07p003736 Quercus lobata HOM05D005608 ORTHO05D007543 1.0e-107 393.7 196 92.9
CiPaw.09G040300 Carya illinoinensis HOM05D005608 ORTHO05D007543 1.7e-107 392.9 196 92.3
CSS0026365 Camellia sinensis var. sinensis HOM05D005608 ORTHO05D007543 2.9e-107 392.1 196 92.9
Cpa.g.sc182.15 Carica papaya HOM05D005608 ORTHO05D007543 5.0e-107 391.3 199 90.5
Potri.006G047000 Populus trichocarpa HOM05D005608 ORTHO05D007543 5.0e-107 391.3 196 92.3
Hma1.2p1_0110F.1_g052840 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 1.9e-106 389.4 196 90.8
Hma1.2p1_1997F.1_g310445 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 1.9e-106 389.4 196 90.8
ClCG04G003700 Citrullus lanatus HOM05D005608 ORTHO05D007543 3.2e-106 388.7 196 90.3
Gohir.D01G184100 Gossypium hirsutum HOM05D005608 ORTHO05D007543 3.2e-106 388.7 196 90.3
Gorai.002G227600 Gossypium raimondii HOM05D005608 ORTHO05D007543 3.2e-106 388.7 196 90.3
Duzib106G2070 Durio zibethinus HOM05D005608 ORTHO05D007543 4.2e-106 388.3 196 90.8
Manes.08G052000 Manihot esculenta HOM05D005608 ORTHO05D007543 5.5e-106 387.9 196 90.3
RcHm_v2.0_Chr3g0483631 Rosa chinensis HOM05D005608 ORTHO05D007543 5.5e-106 387.9 195 91.3
Thecc.05G148100 Theobroma cacao HOM05D005608 ORTHO05D007543 5.5e-106 387.9 196 89.8
PSO339G6269 Papaver somniferum HOM05D005608 ORTHO05D007543 9.4e-106 387.1 196 90.3
TWI77G0221 Tripterygium wilfordii HOM05D005608 ORTHO05D007543 9.4e-106 387.1 196 89.8
Lj1A1125T63 Lonicera japonica HOM05D005608 ORTHO05D007543 1.2e-105 386.7 198 91.4
Haze_19791 Corylus avellana HOM05D005608 ORTHO05D007543 2.1e-105 386.0 196 90.8
Haze_19795 Corylus avellana HOM05D005608 ORTHO05D007543 2.1e-105 386.0 196 90.8
Sabra06G0032700 Salix brachista HOM05D005608 ORTHO05D007543 2.1e-105 386.0 196 90.8
Cfa016779 Carpinus fangiana HOM05D005608 ORTHO05D007543 2.7e-105 385.6 196 90.8
Gohir.A01G193800 Gossypium hirsutum HOM05D005608 ORTHO05D007543 2.7e-105 385.6 196 89.3
GSVIVG01033232001 Vitis vinifera HOM05D005608 ORTHO05D007543 2.7e-105 385.6 196 90.3
PSO384G3225 Papaver somniferum HOM05D005608 ORTHO05D007543 3.6e-105 385.2 196 89.8
MD14G1077300 Malus domestica HOM05D005608 ORTHO05D007543 1.8e-104 382.9 196 88.3
Actinidia39202 Actinidia chinensis HOM05D005608 ORTHO05D007543 2.3e-104 382.5 196 90.3
EL10Ac3g07137 Beta vulgaris HOM05D005608 ORTHO05D007543 2.3e-104 382.5 196 90.3
Prupe.7G053400 Prunus persica HOM05D005608 ORTHO05D007543 2.3e-104 382.5 198 88.9
vmacro21968 Vaccinium macrocarpon HOM05D005608 ORTHO05D007543 2.3e-104 382.5 196 89.3
Ciclev10005572m.g Citrus clementina HOM05D005608 ORTHO05D007543 5.2e-104 381.3 196 89.3
Rhsim03G0028900 Rhododendron simsii HOM05D005608 ORTHO05D007543 6.7e-104 380.9 197 90.4
MSTRG.19838 Avicennia marina HOM05D005608 ORTHO05D007543 2.0e-103 379.4 193 89.1
Atru.chr1.1230 Acer truncatum HOM05D005608 ORTHO05D007543 2.6e-103 379.0 196 88.8
Phvul.007G250500 Phaseolus vulgaris HOM05D005608 ORTHO05D007543 2.6e-103 379.0 196 88.3
CANSAT80G2626 Cannabis sativa HOM05D005608 ORTHO05D007543 3.3e-103 378.6 197 88.3
Oeu017928.1 Olea europaea HOM05D005608 ORTHO05D007543 3.3e-103 378.6 193 89.6
CAN.G676.7 Capsicum annuum HOM05D005608 ORTHO05D007543 4.4e-103 378.3 196 88.3
CANSAT80G0897 Cannabis sativa HOM05D005608 ORTHO05D007543 5.7e-103 377.9 197 88.3
Sed0023334 Sechium edule HOM05D005608 ORTHO05D007543 5.7e-103 377.9 196 87.8
Aa31LG1G23580 Aethionema arabicum HOM05D005608 ORTHO05D007543 7.4e-103 377.5 196 88.3
arahy.Tifrunner.gnm1.ann1.RCN63F Arachis hypogaea HOM05D005608 ORTHO05D007543 7.4e-103 377.5 197 89.3
MELO3C026333.2 Cucumis melo HOM05D005608 ORTHO05D007543 7.4e-103 377.5 196 87.2
Aqoxy2G00245 Aquilegia oxysepala HOM05D005608 ORTHO05D007543 9.7e-103 377.1 196 88.8
FAN02G1028 Fragaria x ananassa HOM05D005608 ORTHO05D007543 9.7e-103 377.1 196 88.3
HanXRQChr04g0125051 Helianthus annuus HOM05D005608 ORTHO05D007543 9.7e-103 377.1 194 91.2
SalBow6G4364 Salvia bowleyana HOM05D005608 ORTHO05D007543 2.2e-102 375.9 193 89.1
TAR369G0194 Trochodendron aralioides HOM05D005608 ORTHO05D007543 2.2e-102 375.9 196 90.3
TAR369G0715 Trochodendron aralioides HOM05D005608 ORTHO05D007543 2.2e-102 375.9 196 90.3
FAN05G0975 Fragaria x ananassa HOM05D005608 ORTHO05D007543 2.8e-102 375.6 198 88.4
Nitab4.5_0001618g0150 Nicotiana tabacum HOM05D005608 ORTHO05D007543 3.7e-102 375.2 196 87.2
Lj5g0018305 Lotus japonicus HOM05D005608 ORTHO05D007543 4.8e-102 374.8 197 88.3
VMungo0720G2960 Vigna mungo HOM05D005608 ORTHO05D007543 4.8e-102 374.8 196 88.3
Nn2g15128 Nelumbo nucifera HOM05D005608 ORTHO05D007543 8.2e-102 374.0 193 90.7
Sc19g0008540 Simmondsia chinensis HOM05D005608 ORTHO05D007543 8.2e-102 374.0 196 87.8
PGSC0003DMG401012699 Solanum tuberosum HOM05D005608 ORTHO05D007543 8.2e-102 374.0 196 86.7
DCAR_013613 Daucus carota HOM05D005608 ORTHO05D007543 1.1e-101 373.6 195 88.2
Nitab4.5_0000826g0060 Nicotiana tabacum HOM05D005608 ORTHO05D007543 1.4e-101 373.2 196 86.7
FvH4_6g24520 Fragaria vesca HOM05D005608 ORTHO05D007543 1.8e-101 372.9 195 87.7
MD12G1082500 Malus domestica HOM05D005608 ORTHO05D007543 1.8e-101 372.9 196 87.8
TAR633G2234 Trochodendron aralioides HOM05D005608 ORTHO05D007543 4.1e-101 371.7 196 88.8
Eucgr.K02019 Eucalyptus grandis HOM05D005608 ORTHO05D007543 7.0e-101 370.9 198 87.9
Lalb_Chr06g0173501 Lupinus albus HOM05D005608 ORTHO05D007543 7.0e-101 370.9 198 86.9
CsaV3_4G027510 Cucumis sativus L. HOM05D005608 ORTHO05D007543 9.1e-101 370.5 196 85.7
MSTRG.26133 Avicennia marina HOM05D005608 ORTHO05D007543 1.6e-100 369.8 195 86.2
Solyc04g016360.3 Solanum lycopersicum HOM05D005608 ORTHO05D007543 2.0e-100 369.4 196 86.2
Glyma.10G106900 Glycine max HOM05D005608 ORTHO05D007543 3.5e-100 368.6 196 86.7
AUR62026096 Chenopodium quinoa HOM05D005608 ORTHO05D007543 4.5e-100 368.2 213 81.7
Glyma.02G186700 Glycine max HOM05D005608 ORTHO05D007543 5.9e-100 367.9 196 86.7
Hund24681 Selenicereus undatus HOM05D005608 ORTHO05D007543 1.0e-99 367.1 196 86.2
Sopen04g008450 Solanum pennellii HOM05D005608 ORTHO05D007543 1.3e-99 366.7 196 85.2
Thhalv10017045m.g Eutrema salsugineum HOM05D005608 ORTHO05D007543 1.7e-99 366.3 196 86.2
Cc06_g18100 Coffea canephora HOM05D005608 ORTHO05D007543 2.9e-99 365.5 196 85.7
Sp4g23810 Schrenkiella parvula HOM05D005608 ORTHO05D007543 2.9e-99 365.5 196 86.7
AT2G41530 Arabidopsis thaliana HOM05D005608 ORTHO05D007543 3.8e-99 365.2 191 89.5
arahy.Tifrunner.gnm1.ann1.QZL5XH Arachis hypogaea HOM05D005608 ORTHO05D007543 3.8e-99 365.2 211 82.9
CARHR136660 Cardamine hirsuta HOM05D005608 ORTHO05D007543 3.8e-99 365.2 196 87.8
FAN14G1555 Fragaria x ananassa HOM05D005608 ORTHO05D007543 3.8e-99 365.2 198 85.9
Migut.J01725 Erythranthe guttata HOM05D005608 ORTHO05D007543 5.0e-99 364.8 193 86.0
AL4G39630 Arabidopsis lyrata HOM05D005608 ORTHO05D007543 6.5e-99 364.4 196 87.2
BcaNung04068 Brassica carinata HOM05D005608 ORTHO05D007543 6.5e-99 364.4 196 87.2
Peaxi162Scf00130g00829 Petunia axillaris HOM05D005608 ORTHO05D007543 8.5e-99 364.0 196 85.2
SGA_v2.0_scaffold273G46432 Striga asiatica HOM05D005608 ORTHO05D007543 8.5e-99 364.0 184 88.6
BcaB01g03463 Brassica carinata HOM05D005608 ORTHO05D007543 4.2e-98 361.7 196 85.7
THA.LOC104801987 Tarenaya hassleriana HOM05D005608 ORTHO05D007543 4.2e-98 361.7 196 86.2
Carub.0004s2382 Capsella rubella HOM05D005608 ORTHO05D007543 1.2e-97 360.1 196 86.7
BcaC01g05330 Brassica carinata HOM05D005608 ORTHO05D007543 1.6e-97 359.8 196 85.7
CDE05G0378 Ceratophyllum demersum HOM05D005608 ORTHO05D007543 3.6e-97 358.6 195 83.1
A03p23310 Brassica napus HOM05D005608 ORTHO05D007543 4.7e-97 358.2 196 84.7
C03p27830 Brassica napus HOM05D005608 ORTHO05D007543 4.7e-97 358.2 196 85.7
BraA03t11549Z Brassica rapa HOM05D005608 ORTHO05D007543 4.7e-97 358.2 196 84.7
BolC3t15154H Brassica oleracea HOM05D005608 ORTHO05D007543 8.0e-97 357.5 196 85.2
ECA236G2378 Erigeron canadensis HOM05D005608 ORTHO05D007543 4.0e-96 355.1 184 90.2
Medtr4g008660 Medicago truncatula HOM05D005608 ORTHO05D007543 8.8e-96 354.0 191 86.9
BraA05t19229Z Brassica rapa HOM05D005608 ORTHO05D007543 1.2e-95 353.6 197 86.8
TPR.G19657 Trifolium pratense HOM05D005608 ORTHO05D007543 1.5e-95 353.2 197 83.8
HPP92_001434 Vanilla planifolia HOM05D005608 ORTHO05D007543 3.3e-95 352.1 193 83.4
A05p02350 Brassica napus HOM05D005608 ORTHO05D007543 7.5e-95 350.9 197 85.8
Medtr1g052175 Medicago truncatula HOM05D005608 ORTHO05D007543 3.7e-94 348.6 191 85.3
Sed0008486 Sechium edule HOM05D005608 ORTHO05D007543 4.8e-94 348.2 196 81.1
C04p02790 Brassica napus HOM05D005608 ORTHO05D007543 8.2e-94 347.4 197 84.8
BolC4t21919H Brassica oleracea HOM05D005608 ORTHO05D007543 8.2e-94 347.4 197 84.8
Ca_12257_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 1.8e-93 346.3 189 84.1
ATR0721G011 Amborella trichopoda HOM05D005608 ORTHO05D007543 1.6e-92 343.2 192 81.8
Lsat_1_v5_gn_8_82180 Lactuca sativa HOM05D005608 ORTHO05D007543 2.7e-92 342.4 242 69.4
Nitab4.5_0000636g0050 Nicotiana tabacum HOM05D005608 ORTHO05D007543 2.9e-91 339.0 196 81.1
Ca_12243_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 3.8e-91 338.6 193 81.9
Peaxi162Scf00130g00828 Petunia axillaris HOM05D005608 ORTHO05D007543 6.5e-91 337.8 196 80.6
Sed0024564 Sechium edule HOM05D005608 ORTHO05D007543 1.9e-90 336.3 196 79.6
SEGI_13354 Sequoiadendron giganteum HOM05D005608 ORTHO05D007543 7.2e-90 334.3 192 80.7
Os01g0939700 Oryza sativa ssp. japonica HOM05D005608 ORTHO05D007543 1.6e-89 333.2 190 80.5
Zm00001eb363240 Zea mays HOM05D005608 ORTHO05D007543 4.4e-87 325.1 190 78.4
Pp3c11_8660 Physcomitrium patens HOM05D005608 ORTHO05D007543 4.2e-82 308.5 207 70.0
Psat6g091560 Pisum sativum HOM05D005608 ORTHO05D007543 1.6e-81 306.6 171 85.4
SMO174G0027 Selaginella moellendorffii HOM05D005608 ORTHO05D007543 3.6e-81 305.4 190 72.6
CBR_g12387 Chara braunii HOM05D005608 ORTHO05D007543 6.8e-80 301.2 190 72.6
TPR.G19661 Trifolium pratense HOM05D005608 ORTHO05D007543 1.2e-79 300.4 167 84.4
unitig_21.g20519 Utricularia gibba HOM05D005608 ORTHO05D007543 3.4e-79 298.9 197 74.6
Eucgr.K01713 Eucalyptus grandis HOM05D005608 ORTHO05D007543 1.3e-78 297.0 186 75.8
Mapoly0020s0136 Marchantia polymorpha HOM05D005608 ORTHO05D007543 2.8e-78 295.8 192 71.4
MBI19_g29889_MAGBIO Magnolia biondii HOM05D005608 ORTHO05D007543 4.5e-76 288.5 147 89.1
AUR62024510 Chenopodium quinoa HOM05D005608 ORTHO05D007543 3.8e-75 285.4 147 89.1
COL.COLO4_32782 Corchorus olitorius HOM05D005608 ORTHO05D007543 2.0e-71 273.1 145 86.9
Cre03.g158800 Chlamydomonas reinhardtii HOM05D005608 ORTHO05D007543 4.3e-66 255.4 194 61.9
SalBow6G3992 Salvia bowleyana HOM05D005608 ORTHO05D007543 1.2e-55 220.7 147 72.8
Haze_27232 Corylus avellana HOM05D005608 ORTHO05D007543 4.7e-49 198.7 222 46.4
Medtr0931s0010 Medicago truncatula HOM05D005608 ORTHO05D044358 6.2e-49 198.4 168 60.7
PRCOL_00003320 Prasinoderma coloniale HOM05D000219 ORTHO05D000226 1.2e-47 194.1 206 51.5
Haze_26706 Corylus avellana HOM05D005608 ORTHO05D007543 2.9e-46 189.5 190 50.0
MCO09G089 Micromonas commoda HOM05D000219 ORTHO05D000226 3.2e-45 186.0 187 49.7
Zm00001eb010250 Zea mays HOM05D005608 ORTHO05D007543 6.4e-22 108.6 78 67.9
Zm00001eb141600 Zea mays HOM05D005608 ORTHO05D007543 3.1e-16 89.7 61 67.2
SEGI_35043 Sequoiadendron giganteum HOM05D005608 ORTHO05D384886 4.9e-14 82.4 52 75.0
PSO765G0043 Papaver somniferum HOM05D005608 ORTHO05D302623 1.7e-06 57.4 39 69.2
SalBow6G5037 Salvia bowleyana HOM05D005608 ORTHO05D357033 8.5e-06 55.1 45 62.2


User provided reference genes

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