Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 1.9e-104 382.5 193 100.0
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 5.5e-59 231.5 145 79.3
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 1.6e-53 213.4 136 76.5
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 1.6e-53 213.4 139 79.1
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 3.8e-52 208.8 177 62.7
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 5.0e-52 208.4 138 74.6
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 8.5e-52 207.6 138 73.9
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 7.2e-51 204.5 139 72.7
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 1.2e-50 203.8 138 71.7
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 3.6e-50 202.2 139 71.2
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 8.8e-49 197.6 135 66.7
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 2.0e-48 196.4 144 68.1
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 4.4e-48 195.3 181 58.0
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 4.4e-48 195.3 139 68.3
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 9.7e-48 194.1 137 70.1
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.3e-47 193.7 152 63.2
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 4.8e-47 191.8 138 65.9
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 4.8e-47 191.8 137 68.6
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 6.3e-47 191.4 138 65.9
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 6.3e-47 191.4 179 53.6
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 1.4e-46 190.3 142 64.8
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 2.4e-46 189.5 179 53.6
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 3.1e-46 189.1 138 64.5
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 4.1e-46 188.7 138 64.5
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 4.1e-46 188.7 145 64.1
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 4.1e-46 188.7 139 67.6
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 5.3e-46 188.3 136 64.7
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 5.3e-46 188.3 142 64.1
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 7.0e-46 188.0 136 65.4
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 9.1e-46 187.6 141 64.5
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 1.6e-45 186.8 137 63.5
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 1.6e-45 186.8 139 66.9
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 2.7e-45 186.0 179 55.9
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 3.5e-45 185.7 142 65.5
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 3.5e-45 185.7 141 64.5
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 4.5e-45 185.3 182 57.1
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 4.5e-45 185.3 182 57.1
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 4.5e-45 185.3 181 55.2
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 5.9e-45 184.9 182 53.8
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 5.9e-45 184.9 182 53.8
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 5.9e-45 184.9 182 53.8
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 5.9e-45 184.9 182 54.4
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 5.9e-45 184.9 180 55.0
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 5.9e-45 184.9 180 55.0
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 1.0e-44 184.1 185 54.1
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.3e-44 183.7 180 55.0
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 1.7e-44 183.3 138 63.8
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.7e-44 183.3 181 56.4
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 2.2e-44 183.0 182 52.7
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.2e-44 183.0 180 54.4
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 2.9e-44 182.6 138 65.2
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 2.9e-44 182.6 184 53.3
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 3.8e-44 182.2 138 63.8
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 5.0e-44 181.8 141 63.1
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 5.0e-44 181.8 142 63.4
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 6.5e-44 181.4 136 61.8
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 8.5e-44 181.0 139 61.9
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 8.5e-44 181.0 180 50.6
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 1.1e-43 180.6 179 54.7
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 1.9e-43 179.9 141 62.4
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 2.5e-43 179.5 138 63.8
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 2.5e-43 179.5 136 61.8
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 4.2e-43 178.7 135 63.7
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 7.2e-43 177.9 141 63.8
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 9.4e-43 177.6 181 54.7
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 1.2e-42 177.2 182 53.8
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.6e-42 176.8 181 54.1
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 1.6e-42 176.8 181 54.1
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 2.1e-42 176.4 135 61.5
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 2.7e-42 176.0 177 54.2
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 4.7e-42 175.3 136 59.6
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 1.0e-41 174.1 182 52.7
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 1.0e-41 174.1 135 65.2
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 1.4e-41 173.7 187 52.9
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 1.4e-41 173.7 135 63.0
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 1.8e-41 173.3 144 59.7
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 1.8e-41 173.3 139 61.2
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 1.8e-41 173.3 139 61.2
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 5.2e-41 171.8 187 52.4
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 6.8e-41 171.4 137 60.6
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 8.8e-41 171.0 143 59.4
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 8.8e-41 171.0 143 59.4
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 8.8e-41 171.0 188 53.7
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 8.8e-41 171.0 126 67.5
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 1.2e-40 170.6 141 59.6
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 1.2e-40 170.6 178 53.4
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 3.4e-40 169.1 180 50.6
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 4.4e-40 168.7 187 50.8
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 5.7e-40 168.3 183 52.5
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 7.5e-40 167.9 182 51.1
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 1.7e-39 166.8 182 53.3
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 8.3e-39 164.5 181 47.5
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 1.8e-38 163.3 142 58.5
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 5.4e-38 161.8 181 48.1
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.2e-37 160.6 161 53.4
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 3.5e-37 159.1 161 52.8
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 5.9e-37 158.3 134 59.0
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 3.8e-36 155.6 146 54.8
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 5.0e-36 155.2 122 61.5
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 8.6e-36 154.5 138 52.9
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 5.5e-35 151.8 139 54.0
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 3.6e-34 149.1 108 66.7
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 3.6e-34 149.1 140 55.0
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 4.7e-34 148.7 136 50.7
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 1.2e-32 144.1 108 63.9
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 2.2e-31 139.8 139 51.1
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 7.8e-29 131.3 143 52.4
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 8.6e-28 127.9 134 54.5
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 9.5e-27 124.4 97 62.9
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 5.2e-25 118.6 138 47.8
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 5.2e-25 118.6 138 47.1
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 3.4e-24 115.9 156 41.0
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 3.7e-23 112.5 101 58.4
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 4.9e-23 112.1 90 61.1
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 6.4e-23 111.7 137 40.1
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 1.4e-22 110.5 144 41.0
Ca_19971_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000156 8.3e-15 84.7 75 61.3
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 2.1e-10 70.1 74 48.6


User provided reference genes

Program Settings