Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39606 Davidia involucrata HOM05D000322 ORTHO05D000186 4.0e-51 204.5 106 100.0
Dinv19821 Davidia involucrata HOM05D000322 ORTHO05D000186 2.4e-08 62.4 35 88.6
Dinv10046 Davidia involucrata HOM05D000387 ORTHO05D000258 3.2e-08 62.0 35 85.7
Dinv29706 Davidia involucrata HOM05D000322 ORTHO05D000186 5.4e-08 61.2 36 75.0
Dinv29694 Davidia involucrata HOM05D000322 ORTHO05D000186 7.1e-08 60.8 35 80.0
PGR031G1396 Punica granatum HOM05D000322 ORTHO05D000186 7.1e-08 60.8 35 82.9
PGR031G1637 Punica granatum HOM05D000322 ORTHO05D000186 7.1e-08 60.8 35 80.0
PGR031G2071 Punica granatum HOM05D000322 ORTHO05D000186 7.1e-08 60.8 35 80.0
PGR031G3450 Punica granatum HOM05D000322 ORTHO05D000186 7.1e-08 60.8 35 80.0
Dinv29697 Davidia involucrata HOM05D000322 ORTHO05D000186 9.2e-08 60.5 35 80.0
TAR365G1193 Trochodendron aralioides HOM05D000322 ORTHO05D000186 9.2e-08 60.5 35 77.1
CiPaw.08G092700 Carya illinoinensis HOM05D000322 ORTHO05D000186 1.2e-07 60.1 35 74.3
Dinv29693 Davidia involucrata HOM05D000322 ORTHO05D000186 1.2e-07 60.1 35 77.1
Dinv33082 Davidia involucrata HOM05D000322 ORTHO05D000186 1.2e-07 60.1 35 85.7
Dinv44328 Davidia involucrata HOM05D000322 ORTHO05D000186 1.2e-07 60.1 35 77.1
CSS0001622 Camellia sinensis var. sinensis HOM05D000322 ORTHO05D000186 1.6e-07 59.7 35 77.1
PGR031G3369 Punica granatum HOM05D000322 ORTHO05D000186 2.1e-07 59.3 35 77.1
Eucgr.H03989 Eucalyptus grandis HOM05D000322 ORTHO05D000186 2.7e-07 58.9 35 74.3
Eucgr.H03997 Eucalyptus grandis HOM05D000322 ORTHO05D000186 2.7e-07 58.9 35 74.3
Eucgr.I00894 Eucalyptus grandis HOM05D000322 ORTHO05D000186 2.7e-07 58.9 35 74.3
QL12p027631 Quercus lobata HOM05D000322 ORTHO05D000186 2.7e-07 58.9 35 74.3
TAR362G0420 Trochodendron aralioides HOM05D000322 ORTHO05D000186 2.7e-07 58.9 35 77.1
CSS0024261 Camellia sinensis var. sinensis HOM05D000322 ORTHO05D000186 3.5e-07 58.5 35 74.3
CSS0036024 Camellia sinensis var. sinensis HOM05D000322 ORTHO05D000186 3.5e-07 58.5 35 74.3
Eucgr.H04013 Eucalyptus grandis HOM05D000322 ORTHO05D000186 3.5e-07 58.5 35 74.3
TAR362G1167 Trochodendron aralioides HOM05D000322 ORTHO05D000186 3.5e-07 58.5 35 77.1
PGR004G0413 Punica granatum HOM05D000322 ORTHO05D000186 4.6e-07 58.2 35 77.1
PGR004G0590 Punica granatum HOM05D000322 ORTHO05D000186 4.6e-07 58.2 35 74.3
PGR031G3782 Punica granatum HOM05D000322 ORTHO05D000186 4.6e-07 58.2 35 74.3
TAR365G0344 Trochodendron aralioides HOM05D000322 ORTHO05D000186 4.6e-07 58.2 33 81.8
TAR365G0876 Trochodendron aralioides HOM05D000322 ORTHO05D000186 4.6e-07 58.2 35 74.3
Dinv29705 Davidia involucrata HOM05D000322 ORTHO05D000186 6.0e-07 57.8 35 74.3
Eucgr.H03987 Eucalyptus grandis HOM05D000322 ORTHO05D000186 6.0e-07 57.8 35 71.4
Eucgr.H03993 Eucalyptus grandis HOM05D000322 ORTHO05D000186 6.0e-07 57.8 35 71.4
Eucgr.I00897 Eucalyptus grandis HOM05D000322 ORTHO05D000186 6.0e-07 57.8 35 71.4
Eucgr.I00898 Eucalyptus grandis HOM05D000322 ORTHO05D000186 6.0e-07 57.8 35 71.4
PGR004G1044 Punica granatum HOM05D000322 ORTHO05D000186 6.0e-07 57.8 35 74.3
PGR004G2695 Punica granatum HOM05D000322 ORTHO05D000186 6.0e-07 57.8 35 74.3
PGR004G2736 Punica granatum HOM05D000322 ORTHO05D000186 6.0e-07 57.8 35 74.3
TAR371G1191 Trochodendron aralioides HOM05D000322 ORTHO05D000186 6.0e-07 57.8 35 74.3
TAR636G1643 Trochodendron aralioides HOM05D000322 ORTHO05D000186 6.0e-07 57.8 35 74.3
CSS0039713 Camellia sinensis var. sinensis HOM05D000322 ORTHO05D000186 7.8e-07 57.4 35 74.3
Eucgr.H03992 Eucalyptus grandis HOM05D000322 ORTHO05D000186 7.8e-07 57.4 41 63.4
Eucgr.H04000 Eucalyptus grandis HOM05D000322 ORTHO05D000186 7.8e-07 57.4 35 74.3
PGR004G0506 Punica granatum HOM05D000322 ORTHO05D000186 7.8e-07 57.4 32 75.0
PGR004G2165 Punica granatum HOM05D000322 ORTHO05D000186 7.8e-07 57.4 30 83.3
TAR365G0485 Trochodendron aralioides HOM05D000322 ORTHO05D000186 7.8e-07 57.4 35 74.3
CSS0049942 Camellia sinensis var. sinensis HOM05D000322 ORTHO05D000186 1.0e-06 57.0 35 71.4
CiPaw.07G113000 Carya illinoinensis HOM05D000322 ORTHO05D000186 1.0e-06 57.0 35 68.6
Eucgr.I00896 Eucalyptus grandis HOM05D000322 ORTHO05D000186 1.0e-06 57.0 35 68.6
Eucgr.I00900 Eucalyptus grandis HOM05D000322 ORTHO05D000186 1.0e-06 57.0 32 75.0
Eucgr.I00902 Eucalyptus grandis HOM05D000322 ORTHO05D000186 1.0e-06 57.0 32 75.0
Nn4g25704 Nelumbo nucifera HOM05D000322 ORTHO05D000186 1.0e-06 57.0 35 74.3
PGR004G1926 Punica granatum HOM05D000322 ORTHO05D000186 1.0e-06 57.0 32 78.1
PGR004G2495 Punica granatum HOM05D000322 ORTHO05D000186 1.0e-06 57.0 35 74.3
Eucgr.H03983 Eucalyptus grandis HOM05D000322 ORTHO05D000186 1.3e-06 56.6 35 71.4
Lj2A1200T73 Lonicera japonica HOM05D000322 ORTHO05D000186 1.3e-06 56.6 35 71.4
Nn4g25700 Nelumbo nucifera HOM05D000322 ORTHO05D000186 1.3e-06 56.6 35 71.4
Nn4g25701 Nelumbo nucifera HOM05D000322 ORTHO05D000186 1.3e-06 56.6 35 74.3
TAR365G1225 Trochodendron aralioides HOM05D000322 ORTHO05D000186 1.3e-06 56.6 35 74.3
PGR004G0172 Punica granatum HOM05D000322 ORTHO05D000186 1.7e-06 56.2 35 68.6
PGR004G1453 Punica granatum HOM05D000322 ORTHO05D000186 1.7e-06 56.2 35 68.6
Eucgr.H03986 Eucalyptus grandis HOM05D000322 ORTHO05D000186 2.3e-06 55.8 41 61.0
Lj1C15T17 Lonicera japonica HOM05D000322 ORTHO05D000186 2.3e-06 55.8 34 76.5
Lj2A1200T72 Lonicera japonica HOM05D000322 ORTHO05D000186 2.3e-06 55.8 35 71.4
CSS0022759 Camellia sinensis var. sinensis HOM05D000322 ORTHO05D000186 3.0e-06 55.5 32 75.0
CSS0032777 Camellia sinensis var. sinensis HOM05D000322 ORTHO05D000186 3.0e-06 55.5 32 75.0
Nn4g25702 Nelumbo nucifera HOM05D000322 ORTHO05D000186 3.0e-06 55.5 30 80.0
Oeu061875.1 Olea europaea HOM05D000322 ORTHO05D000186 3.0e-06 55.5 36 63.9
PGR004G1749 Punica granatum HOM05D000322 ORTHO05D000186 3.0e-06 55.5 30 80.0
GSVIVG01035054001 Vitis vinifera HOM05D000322 ORTHO05D000186 3.0e-06 55.5 37 67.6
CiPaw.02G078400 Carya illinoinensis HOM05D000322 ORTHO05D000186 3.9e-06 55.1 35 65.7
Eucgr.H03988 Eucalyptus grandis HOM05D000322 ORTHO05D000186 3.9e-06 55.1 35 68.6
Eucgr.H03995 Eucalyptus grandis HOM05D000322 ORTHO05D000186 3.9e-06 55.1 35 68.6
PGR004G0472 Punica granatum HOM05D000322 ORTHO05D000186 3.9e-06 55.1 35 65.7
PGR004G0864 Punica granatum HOM05D000322 ORTHO05D000186 3.9e-06 55.1 35 65.7
PGR004G1134 Punica granatum HOM05D000322 ORTHO05D000186 3.9e-06 55.1 35 65.7
PGR004G1393 Punica granatum HOM05D000322 ORTHO05D000186 3.9e-06 55.1 35 71.4
PGR004G1530 Punica granatum HOM05D000322 ORTHO05D000186 3.9e-06 55.1 35 74.3
Eucgr.H02708 Eucalyptus grandis HOM05D000322 ORTHO05D000186 5.1e-06 54.7 35 68.6
Eucgr.H03990 Eucalyptus grandis HOM05D000322 ORTHO05D000186 5.1e-06 54.7 41 58.5
Eucgr.H03994 Eucalyptus grandis HOM05D000322 ORTHO05D000186 5.1e-06 54.7 35 68.6
Manes.15G008600 Manihot esculenta HOM05D000322 ORTHO05D000186 5.1e-06 54.7 35 71.4
Peaxi162Scf00073g01326 Petunia axillaris HOM05D000322 ORTHO05D000186 5.1e-06 54.7 35 65.7
TAR362G0165 Trochodendron aralioides HOM05D000322 ORTHO05D000186 5.1e-06 54.7 35 68.6
TAR362G0513 Trochodendron aralioides HOM05D000322 ORTHO05D000186 5.1e-06 54.7 35 68.6
TAR636G0552 Trochodendron aralioides HOM05D000322 ORTHO05D000186 5.1e-06 54.7 37 64.9
Eucgr.H03973 Eucalyptus grandis HOM05D000322 ORTHO05D000186 6.6e-06 54.3 33 69.7
Eucgr.H04018 Eucalyptus grandis HOM05D000322 ORTHO05D000186 6.6e-06 54.3 35 68.6
FAN24G1175 Fragaria x ananassa HOM05D000141 ORTHO05D000780 6.6e-06 54.3 38 60.5
PGR004G0112 Punica granatum HOM05D000322 ORTHO05D000186 6.6e-06 54.3 30 76.7
PGR004G0694 Punica granatum HOM05D000322 ORTHO05D000186 6.6e-06 54.3 30 80.0
PGR004G1519 Punica granatum HOM05D000322 ORTHO05D000186 6.6e-06 54.3 30 80.0
PGR004G1630 Punica granatum HOM05D000322 ORTHO05D000186 6.6e-06 54.3 30 76.7
PGR004G1867 Punica granatum HOM05D000322 ORTHO05D000186 6.6e-06 54.3 35 71.4
PGR004G1984 Punica granatum HOM05D000322 ORTHO05D000186 6.6e-06 54.3 30 76.7
TAR365G1188 Trochodendron aralioides HOM05D000322 ORTHO05D000186 6.6e-06 54.3 35 68.6
Eucgr.H03998 Eucalyptus grandis HOM05D000322 ORTHO05D000186 8.6e-06 53.9 35 65.7
Eucgr.H04003 Eucalyptus grandis HOM05D000322 ORTHO05D000186 8.6e-06 53.9 35 65.7
FvH4_2g26151 Fragaria vesca HOM05D000322 ORTHO05D000186 8.6e-06 53.9 32 68.8


User provided reference genes

Program Settings