Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39538 Davidia involucrata HOM05D004095 ORTHO05D003197 1.4e-83 313.2 183 100.0
Dinv31870 Davidia involucrata HOM05D004095 ORTHO05D003197 3.8e-41 172.2 154 79.2
Actinidia17001 Actinidia chinensis HOM05D004095 ORTHO05D003197 6.4e-33 144.8 141 68.8
Actinidia15439 Actinidia chinensis HOM05D004095 ORTHO05D003197 1.1e-32 144.1 153 68.0
CSS0032179 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 6.0e-31 138.3 155 61.9
CSS0006390 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 8.7e-30 134.4 155 61.3
Cc10_g01420 Coffea canephora HOM05D004095 ORTHO05D003197 3.2e-24 115.9 155 57.4
TWI12G1115 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 9.6e-21 104.4 153 54.9
CAN.G311.49 Capsicum annuum HOM05D004095 ORTHO05D003197 3.7e-20 102.4 174 50.0
PGSC0003DMG400009946 Solanum tuberosum HOM05D004095 ORTHO05D003197 3.7e-20 102.4 176 51.1
MSTRG.1174 Avicennia marina HOM05D004095 ORTHO05D003197 9.0e-19 97.8 161 55.3
Sopen04g035350 Solanum pennellii HOM05D004095 ORTHO05D003197 1.5e-18 97.1 178 48.9
vmacro07570 Vaccinium macrocarpon HOM05D004095 ORTHO05D003197 1.5e-18 97.1 178 52.8
Peaxi162Scf00064g00737 Petunia axillaris HOM05D004095 ORTHO05D003197 2.0e-18 96.7 154 55.8
Solyc04g081730.3 Solanum lycopersicum HOM05D004095 ORTHO05D003197 2.0e-18 96.7 177 49.2
Actinidia03180 Actinidia chinensis HOM05D004095 ORTHO05D003197 2.6e-18 96.3 124 64.5
Peaxi162Scf00860g00422 Petunia axillaris HOM05D004095 ORTHO05D003197 2.6e-18 96.3 156 43.6
TAR376G0784 Trochodendron aralioides HOM05D004095 ORTHO05D003197 4.5e-18 95.5 154 50.0
Oeu061977.1 Olea europaea HOM05D004095 ORTHO05D003197 5.8e-18 95.1 169 53.3
Lj4A21T58 Lonicera japonica HOM05D004095 ORTHO05D003197 7.6e-18 94.7 163 55.8
Sc15g0004790 Simmondsia chinensis HOM05D004095 ORTHO05D003197 1.0e-17 94.4 162 54.9
MSTRG.25264 Avicennia marina HOM05D004095 ORTHO05D003197 1.3e-17 94.0 155 58.7
Cfa007004 Carpinus fangiana HOM05D004095 ORTHO05D003197 8.4e-17 91.3 154 54.5
Lj4A799T84 Lonicera japonica HOM05D004095 ORTHO05D003197 2.5e-16 89.7 149 56.4
MSTRG.22345 Avicennia marina HOM05D004095 ORTHO05D003197 3.2e-16 89.4 148 52.7
Lsat_1_v5_gn_8_29800 Lactuca sativa HOM05D004095 ORTHO05D003197 5.5e-16 88.6 148 50.0
GSVIVG01018727001 Vitis vinifera HOM05D004095 ORTHO05D003197 5.5e-16 88.6 161 49.1
CAN.G1517.6 Capsicum annuum HOM05D004095 ORTHO05D003197 2.1e-15 86.7 162 48.1
Duzib147G0922 Durio zibethinus HOM05D004095 ORTHO05D003197 3.5e-15 85.9 134 56.7
GSVIVG01009951001 Vitis vinifera HOM05D004095 ORTHO05D003197 3.5e-15 85.9 134 55.2
Atru.chr3.863_Atru.chr3.864 Acer truncatum HOM05D004095 ORTHO05D003197 4.6e-15 85.5 148 56.1
MELO3C011353.2 Cucumis melo HOM05D004095 ORTHO05D003197 4.6e-15 85.5 144 55.6
Duzib264G0091 Durio zibethinus HOM05D004095 ORTHO05D003197 1.0e-14 84.3 139 56.8
CsaV3_2G024280 Cucumis sativus L. HOM05D004095 ORTHO05D003197 1.3e-14 84.0 147 55.1
DCAR_009498 Daucus carota HOM05D004095 ORTHO05D003197 1.3e-14 84.0 160 50.0
Nn6g31993 Nelumbo nucifera HOM05D004095 ORTHO05D003197 3.9e-14 82.4 155 49.7
Hund01666 Selenicereus undatus HOM05D004095 ORTHO05D003197 3.9e-14 82.4 162 42.6
CiPaw.07G146700 Carya illinoinensis HOM05D004095 ORTHO05D003197 6.7e-14 81.6 154 48.1
Migut.C00862 Erythranthe guttata HOM05D004095 ORTHO05D003197 6.7e-14 81.6 165 48.5
PGSC0003DMG400029333 Solanum tuberosum HOM05D004095 ORTHO05D003197 6.7e-14 81.6 150 50.0
CiPaw.08G067700 Carya illinoinensis HOM05D004095 ORTHO05D003197 8.7e-14 81.3 154 51.3
ClCG08G014140 Citrullus lanatus HOM05D004095 ORTHO05D003197 2.5e-13 79.7 147 55.1
Duzib187G0006 Durio zibethinus HOM05D004095 ORTHO05D003197 2.5e-13 79.7 156 52.6
ECA233G2314 Erigeron canadensis HOM05D004095 ORTHO05D003197 2.5e-13 79.7 151 51.0
Gorai.003G007900 Gossypium raimondii HOM05D004095 ORTHO05D003197 3.3e-13 79.3 139 54.7
unitig_749.g13901 Utricularia gibba HOM05D004095 ORTHO05D003197 4.3e-13 79.0 145 47.6
HanXRQChr12g0366821 Helianthus annuus HOM05D004095 ORTHO05D003197 5.7e-13 78.6 170 39.4
PSO675G0587 Papaver somniferum HOM05D004095 ORTHO05D003197 5.7e-13 78.6 156 50.6
TAR381G0731 Trochodendron aralioides HOM05D004095 ORTHO05D003197 5.7e-13 78.6 159 44.7
Oeu026642.1 Olea europaea HOM05D004095 ORTHO05D003197 9.7e-13 77.8 218 41.3
SGA_v2.0_scaffold19G08554 Striga asiatica HOM05D004095 ORTHO05D003197 2.8e-12 76.3 132 55.3
MBI05_g23379_MAGBIO Magnolia biondii HOM05D004095 ORTHO05D003197 6.3e-12 75.1 137 52.6
TAR628G1526 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.8e-11 73.6 204 40.2
QL02p012206 Quercus lobata HOM05D004095 ORTHO05D003197 4.1e-11 72.4 81 53.1
Lalb_Chr08g0246191 Lupinus albus HOM05D004095 ORTHO05D003197 5.3e-11 72.0 152 49.3
Aqoxy5G01820 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 6.9e-11 71.6 171 45.6
TWI36G1615 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 1.2e-10 70.9 128 50.0
CSS0036757 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 1.5e-10 70.5 183 41.5
AUR62040566 Chenopodium quinoa HOM05D004095 ORTHO05D003197 1.5e-10 70.5 154 37.7
FAN19G1292 Fragaria x ananassa HOM05D024588 ORTHO05D003197 2.0e-10 70.1 133 51.9
Potri.002G019200 Populus trichocarpa HOM05D004095 ORTHO05D003197 3.4e-10 69.3 137 38.0
unitig_747.g21527 Utricularia gibba HOM05D002344 ORTHO05D002954 3.4e-10 69.3 137 48.2
Haze_22667 Corylus avellana HOM05D004095 ORTHO05D003197 4.5e-10 68.9 151 52.3
SalBow7G2790 Salvia bowleyana HOM05D004095 ORTHO05D003197 4.5e-10 68.9 181 40.3
HanXRQChr13g0387151 Helianthus annuus HOM05D004095 ORTHO05D003197 5.9e-10 68.6 156 45.5
Ah.00g000350 Amaranthus hybridus HOM05D004095 ORTHO05D003197 1.0e-09 67.8 164 38.4
Hma1.2p1_0023F.1_g015650 Hydrangea macrophylla HOM05D004095 ORTHO05D003197 1.3e-09 67.4 57 64.9
PSO700G0117 Papaver somniferum HOM05D004095 ORTHO05D003197 1.3e-09 67.4 154 43.5
arahy.Tifrunner.gnm1.ann1.I59WU7 Arachis hypogaea HOM05D004095 ORTHO05D003197 1.7e-09 67.0 148 42.6
Sed0017695 Sechium edule HOM05D004095 ORTHO05D003197 2.2e-09 66.6 145 50.3
Sed0007913 Sechium edule HOM05D004095 ORTHO05D003197 2.9e-09 66.2 140 39.3
SGA_v2.0_scaffold11G05941 Striga asiatica HOM05D004095 ORTHO05D003197 2.9e-09 66.2 154 49.4
Gohir.D03G007700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 3.8e-09 65.9 140 50.0
PSO170G2543 Papaver somniferum HOM05D004095 ORTHO05D003197 3.8e-09 65.9 150 45.3
Cfa013982 Carpinus fangiana HOM05D004095 ORTHO05D003197 6.5e-09 65.1 154 45.5
PSO541G2818 Papaver somniferum HOM05D004095 ORTHO05D003197 1.1e-08 64.3 157 41.4
Eucgr.I02328 Eucalyptus grandis HOM05D004095 ORTHO05D003197 1.4e-08 63.9 138 41.3
Nitab4.5_0001944g0070 Nicotiana tabacum HOM05D004095 ORTHO05D003197 1.4e-08 63.9 69 50.7
Prupe.7G171900 Prunus persica HOM05D004095 ORTHO05D003197 1.4e-08 63.9 135 43.0
VMungo0647G0628 Vigna mungo HOM05D013708 ORTHO05D003197 1.9e-08 63.5 150 46.7
Gohir.A02G172400 Gossypium hirsutum HOM05D004095 ORTHO05D003197 2.5e-08 63.2 139 49.6
Nitab4.5_0006505g0050 Nicotiana tabacum HOM05D004095 ORTHO05D003197 7.2e-08 61.6 198 39.9
Aqoxy6G02168 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 9.4e-08 61.2 145 46.9
PGR119G1825 Punica granatum HOM05D004095 ORTHO05D003197 9.4e-08 61.2 134 46.3
AUR62041467 Chenopodium quinoa HOM05D004095 ORTHO05D003197 1.2e-07 60.8 182 45.6
Oeu007365.1 Olea europaea HOM05D004095 ORTHO05D003197 1.2e-07 60.8 73 53.4
arahy.Tifrunner.gnm1.ann1.VNIF6J Arachis hypogaea HOM05D004095 ORTHO05D003197 2.1e-07 60.1 148 39.9
COL.COLO4_22466 Corchorus olitorius HOM05D004095 ORTHO05D003197 2.1e-07 60.1 139 35.3
Lj5g0025072 Lotus japonicus HOM05D004095 ORTHO05D003197 2.7e-07 59.7 139 48.9
Potri.005G242400 Populus trichocarpa HOM05D004095 ORTHO05D003197 2.7e-07 59.7 136 40.4
CARHR244340 Cardamine hirsuta HOM05D004095 ORTHO05D003197 3.6e-07 59.3 134 47.8
THA.LOC104807504 Tarenaya hassleriana HOM05D004095 ORTHO05D003197 3.6e-07 59.3 140 42.9
EL10Ac3g06641 Beta vulgaris HOM05D004095 ORTHO05D003197 4.6e-07 58.9 183 38.3
Ciclev10002009m.g Citrus clementina HOM05D004095 ORTHO05D003197 1.0e-06 57.8 138 41.3
TPR.G26385 Trifolium pratense HOM05D013708 ORTHO05D003197 1.0e-06 57.8 164 47.6
PGR031G2559 Punica granatum HOM05D004095 ORTHO05D003197 2.3e-06 56.6 137 48.2
Manes.18G010907 Manihot esculenta HOM05D004095 ORTHO05D003197 3.0e-06 56.2 149 35.6
Haze_03728 Corylus avellana HOM05D004095 ORTHO05D003197 3.9e-06 55.8 54 59.3
Thecc.08G047900 Theobroma cacao HOM05D004095 ORTHO05D003197 3.9e-06 55.8 136 44.1
FvH4_1g11400 Fragaria vesca HOM05D024588 ORTHO05D003197 5.1e-06 55.5 134 47.0
Gorai.009G193100 Gossypium raimondii HOM05D004095 ORTHO05D003197 5.1e-06 55.5 151 31.1


User provided reference genes

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