Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39518 Davidia involucrata HOM05D005472 ORTHO05D005897 8.5e-76 287.0 149 100.0
Dinv31847 Davidia involucrata HOM05D005472 ORTHO05D005897 6.6e-20 101.3 238 35.3
Thecc.08G044600 Theobroma cacao HOM05D005472 ORTHO05D005897 1.4e-14 83.6 148 41.9
vmacro07586 Vaccinium macrocarpon HOM05D005472 ORTHO05D005897 4.2e-14 82.0 224 31.7
Rhsim06G0021600 Rhododendron simsii HOM05D005472 ORTHO05D005897 1.6e-13 80.1 72 54.2
CiPaw.08G066500 Carya illinoinensis HOM05D005472 ORTHO05D005897 3.5e-13 79.0 261 28.4
Gohir.A05G257000 Gossypium hirsutum HOM05D005472 ORTHO05D005897 7.9e-13 77.8 93 50.5
Ciclev10001635m.g Citrus clementina HOM05D005472 ORTHO05D005897 1.3e-12 77.0 67 59.7
Gohir.D05G258500 Gossypium hirsutum HOM05D005472 ORTHO05D005897 2.3e-12 76.3 150 38.0
Gorai.009G270000 Gossypium raimondii HOM05D005472 ORTHO05D005897 2.3e-12 76.3 150 38.0
vmacro21726 Vaccinium macrocarpon HOM05D005472 ORTHO05D005897 2.3e-12 76.3 224 29.9
Prupe.1G365300 Prunus persica HOM05D005472 ORTHO05D005897 6.7e-12 74.7 114 41.2
Duzib041G0268 Durio zibethinus HOM05D005472 ORTHO05D005897 8.7e-12 74.3 145 35.9
CSS0003502 Camellia sinensis var. sinensis HOM05D005472 ORTHO05D005897 4.3e-11 72.0 219 28.8
COL.COLO4_26145 Corchorus olitorius HOM05D005472 ORTHO05D005897 9.6e-11 70.9 271 28.4
Gohir.A05G186500 Gossypium hirsutum HOM05D005472 ORTHO05D005897 2.1e-10 69.7 93 44.1
QL02p011634 Quercus lobata HOM05D005472 ORTHO05D005897 1.1e-09 67.4 71 56.3
Cc10_g01680 Coffea canephora HOM05D005472 ORTHO05D005897 4.0e-09 65.5 112 39.3
Gorai.009G194600 Gossypium raimondii HOM05D005472 ORTHO05D005897 4.0e-09 65.5 93 43.0
Oeu007327.1 Olea europaea HOM05D005472 ORTHO05D005897 9.0e-09 64.3 293 27.0
Actinidia16989 Actinidia chinensis HOM05D005472 ORTHO05D005897 1.2e-08 63.9 104 39.4
Eucgr.F00587 Eucalyptus grandis HOM05D005472 ORTHO05D005897 2.6e-08 62.8 132 39.4
MD08G1013200 Malus domestica HOM05D005472 ORTHO05D005897 3.4e-08 62.4 117 38.5
GSVIVG01009906001 Vitis vinifera HOM05D005472 ORTHO05D005897 5.8e-08 61.6 157 34.4
Actinidia15422 Actinidia chinensis HOM05D005472 ORTHO05D005897 9.9e-08 60.8 104 39.4
Manes.05G147400 Manihot esculenta HOM05D005472 ORTHO05D005897 4.9e-07 58.5 122 33.6
Haze_22634 Corylus avellana HOM05D005472 ORTHO05D005897 1.1e-06 57.4 279 25.8
CiPaw.07G149800 Carya illinoinensis HOM05D005472 ORTHO05D005897 1.4e-06 57.0 274 25.5
SalBow7G1801 Salvia bowleyana HOM05D005472 ORTHO05D005897 1.4e-06 57.0 99 42.4
TWI36G1185 Tripterygium wilfordii HOM05D005472 ORTHO05D005897 1.4e-06 57.0 70 50.0
CAN.G311.30 Capsicum annuum HOM05D005472 ORTHO05D005897 3.2e-06 55.8 92 41.3
MD15G1012000 Malus domestica HOM05D005472 ORTHO05D005897 3.2e-06 55.8 119 35.3
Manes.18G013500 Manihot esculenta HOM05D005472 ORTHO05D005897 4.2e-06 55.5 100 44.0
Glyma.09G028700 Glycine max HOM05D005472 ORTHO05D005897 5.5e-06 55.1 63 47.6
TAR376G0796 Trochodendron aralioides HOM05D005472 ORTHO05D003948 5.5e-06 55.1 141 34.0
Solyc04g081450.3 Solanum lycopersicum HOM05D005472 ORTHO05D005897 7.1e-06 54.7 97 41.2
VMungo0540G2141 Vigna mungo HOM05D005472 ORTHO05D005897 7.1e-06 54.7 92 42.4
Atru.chr2.2948 Acer truncatum HOM05D005472 ORTHO05D005897 9.3e-06 54.3 65 52.3
Sopen04g035060 Solanum pennellii HOM05D005472 ORTHO05D005897 9.3e-06 54.3 97 41.2


User provided reference genes

Program Settings