Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39435 Davidia involucrata HOM05D010025 ORTHO05D010580 2.0e-29 132.1 83 100.0
Dinv36101 Davidia involucrata HOM05D010025 ORTHO05D010580 3.5e-18 94.7 64 75.0
Actinidia22529 Actinidia chinensis HOM05D010025 ORTHO05D013126 2.8e-12 75.1 63 63.5
Cc10_g02650 Coffea canephora HOM05D010025 ORTHO05D013126 6.3e-12 73.9 64 60.9
Prupe.1G377200 Prunus persica HOM05D008807 ORTHO05D010580 2.4e-11 72.0 64 54.7
GSVIVG01009733001 Vitis vinifera HOM05D008807 ORTHO05D010580 4.1e-11 71.2 50 64.0
Rhsim06G0030900 Rhododendron simsii HOM05D010025 ORTHO05D013126 5.4e-11 70.9 63 61.9
Nn5g29649 Nelumbo nucifera HOM05D008807 ORTHO05D010580 7.0e-11 70.5 64 60.9
Nitab4.5_0008031g0070 Nicotiana tabacum HOM05D010025 ORTHO05D013126 7.0e-11 70.5 68 58.8
CSS0043815 Camellia sinensis var. sinensis HOM05D010025 ORTHO05D013126 9.1e-11 70.1 64 60.9
Rhsim06G0031600 Rhododendron simsii HOM05D010025 ORTHO05D013126 7.7e-10 67.0 64 64.1
Peaxi162Scf00582g00015 Petunia axillaris HOM05D010025 ORTHO05D013126 1.3e-09 66.2 68 54.4
Lsat_1_v5_gn_4_117741 Lactuca sativa HOM05D010025 ORTHO05D013126 1.7e-09 65.9 59 59.3
MD15G1024800 Malus domestica HOM05D008807 ORTHO05D010580 2.2e-09 65.5 48 60.4
MD08G1029300 Malus domestica HOM05D008807 ORTHO05D010580 5.0e-09 64.3 48 60.4
Nitab4.5_0003265g0110 Nicotiana tabacum HOM05D010025 ORTHO05D013126 6.5e-09 63.9 95 44.2
TAR376G0370 Trochodendron aralioides HOM05D008807 ORTHO05D010580 8.5e-09 63.5 55 58.2
Ciclev10002762m.g Citrus clementina HOM05D008807 ORTHO05D010580 1.1e-08 63.2 50 64.0
Haze_17940 Corylus avellana HOM05D008807 ORTHO05D010580 1.5e-08 62.8 63 54.0
QL02p009078 Quercus lobata HOM05D008807 ORTHO05D010580 1.9e-08 62.4 47 66.0
Thecc.08G029700 Theobroma cacao HOM05D008807 ORTHO05D010580 1.9e-08 62.4 48 56.2
Sopen04g034150 Solanum pennellii HOM05D010025 ORTHO05D013126 4.2e-08 61.2 59 59.3
Nitab4.5_0003363g0020 Nicotiana tabacum HOM05D010025 ORTHO05D013126 5.5e-08 60.8 68 51.5
Manes.05G157800 Manihot esculenta HOM05D008807 ORTHO05D010580 7.2e-08 60.5 67 52.2
Peaxi162Scf00303g00059 Petunia axillaris HOM05D010025 ORTHO05D013126 7.2e-08 60.5 68 50.0
TAR625G0014 Trochodendron aralioides HOM05D008807 ORTHO05D010580 7.2e-08 60.5 52 65.4
Nn1g04939 Nelumbo nucifera HOM05D008807 ORTHO05D010580 2.7e-07 58.5 40 75.0
PGSC0003DMG400003739 Solanum tuberosum HOM05D010025 ORTHO05D013126 2.7e-07 58.5 59 55.9
Gohir.D06G004700 Gossypium hirsutum HOM05D008807 ORTHO05D010580 6.1e-07 57.4 48 56.2
Gorai.010G009300 Gossypium raimondii HOM05D008807 ORTHO05D010580 6.1e-07 57.4 48 56.2
Gohir.A06G009200 Gossypium hirsutum HOM05D008807 ORTHO05D010580 8.0e-07 57.0 48 56.2
CANSAT25G2084 Cannabis sativa HOM05D008807 ORTHO05D010580 1.0e-06 56.6 62 53.2
Potri.002G034300 Populus trichocarpa HOM05D008807 ORTHO05D010580 1.0e-06 56.6 50 58.0
Cpa.g.sc123.50 Carica papaya HOM05D008807 ORTHO05D010580 1.8e-06 55.8 50 50.0
MBI16_g07724_MAGBIO Magnolia biondii HOM05D008807 ORTHO05D010580 1.8e-06 55.8 55 52.7
Cfa018176 Carpinus fangiana HOM05D008807 ORTHO05D010580 2.3e-06 55.5 44 61.4
Sabra05G0176700 Salix brachista HOM05D008807 ORTHO05D010580 2.3e-06 55.5 50 58.0
HanXRQChr16g0501551 Helianthus annuus HOM05D010025 ORTHO05D013126 3.0e-06 55.1 60 60.0
DCAR_022478 Daucus carota HOM05D010025 ORTHO05D013126 4.0e-06 54.7 61 52.5
Manes.18G022900 Manihot esculenta HOM05D008807 ORTHO05D010580 4.0e-06 54.7 58 55.2
Aqoxy6G01147 Aquilegia oxysepala HOM05D008807 ORTHO05D010580 5.2e-06 54.3 50 56.0
Haze_17942 Corylus avellana HOM05D008807 ORTHO05D010580 5.2e-06 54.3 47 57.4
FAN27G2218 Fragaria x ananassa HOM05D008807 ORTHO05D010580 6.8e-06 53.9 61 44.3
Potri.005G228800 Populus trichocarpa HOM05D008807 ORTHO05D010580 8.8e-06 53.5 67 50.7
RcHm_v2.0_Chr6g0301311 Rosa chinensis HOM05D008807 ORTHO05D010580 8.8e-06 53.5 48 54.2


User provided reference genes

Program Settings