Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39431 Davidia involucrata HOM05D002646 ORTHO05D002782 1.7e-91 339.3 175 100.0
Atru.chr13.450 Acer truncatum HOM05D002646 ORTHO05D002782 9.5e-42 174.1 196 51.0
Lj5g0008895 Lotus japonicus HOM05D002646 ORTHO05D002782 5.9e-36 154.8 247 38.9
CANSAT25G1404 Cannabis sativa HOM05D002646 ORTHO05D002782 2.0e-31 139.8 252 36.1
Glyma.14G073700 Glycine max HOM05D002646 ORTHO05D002782 5.8e-31 138.3 243 38.7
Glyma.17G251300 Glycine max HOM05D002646 ORTHO05D002782 1.7e-30 136.7 236 39.4
MD11G1162400 Malus domestica HOM05D002646 ORTHO05D002782 1.1e-26 124.0 166 44.0
Sabra02G0027900 Salix brachista HOM05D006278 ORTHO05D007526 1.9e-26 123.2 83 74.7
HanXRQChr03g0069631 Helianthus annuus HOM05D002646 ORTHO05D002782 2.1e-25 119.8 256 31.2
QL02p008978 Quercus lobata HOM05D002646 ORTHO05D002782 8.1e-25 117.9 128 49.2
MBI17_g19091_MAGBIO Magnolia biondii HOM05D002646 ORTHO05D002782 1.8e-24 116.7 170 42.4
CDE05G0187 Ceratophyllum demersum HOM05D002646 ORTHO05D002782 6.8e-24 114.8 209 35.9
Actinidia15339 Actinidia chinensis HOM05D002646 ORTHO05D002782 1.3e-22 110.5 82 72.0
Oeu007022.1 Olea europaea HOM05D002646 ORTHO05D002782 1.7e-22 110.2 148 45.3
Dinv36096 Davidia involucrata HOM05D002646 ORTHO05D002782 2.2e-22 109.8 65 84.6
MD03G1139500 Malus domestica HOM05D002646 ORTHO05D002782 6.4e-22 108.2 67 79.1
Oeu063762.1 Olea europaea HOM05D002646 ORTHO05D002782 6.4e-22 108.2 124 49.2
Eucgr.F01577 Eucalyptus grandis HOM05D002646 ORTHO05D002782 1.1e-21 107.5 76 67.1
Lj4A37G90 Lonicera japonica HOM05D002646 ORTHO05D002782 1.4e-21 107.1 76 67.1
Sabra05G0176100 Salix brachista HOM05D002646 ORTHO05D002782 9.2e-21 104.4 152 40.8
Sc02g0005990 Simmondsia chinensis HOM05D002646 ORTHO05D002782 9.2e-21 104.4 83 63.9
Nn7g35815 Nelumbo nucifera HOM05D002646 ORTHO05D002782 1.6e-20 103.6 72 73.6
Manes.05G158200 Manihot esculenta HOM05D002646 ORTHO05D002782 2.7e-20 102.8 71 69.0
PGR083G1089 Punica granatum HOM05D002646 ORTHO05D002782 4.6e-20 102.1 130 46.9
Potri.005G228200 Populus trichocarpa HOM05D002646 ORTHO05D002782 7.8e-20 101.3 72 72.2
TWI36G1083 Tripterygium wilfordii HOM05D002646 ORTHO05D002782 1.3e-19 100.5 75 66.7
GSVIVG01009725001 Vitis vinifera HOM05D002646 ORTHO05D002782 1.3e-19 100.5 66 75.8
CSS0007142 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 2.3e-19 99.8 171 39.2
Rhsim06G0032100 Rhododendron simsii HOM05D002646 ORTHO05D002782 2.3e-19 99.8 97 59.8
SHI08146 Sapria himalayana HOM05D002646 ORTHO05D002782 3.0e-19 99.4 100 55.0
Thecc.08G028900 Theobroma cacao HOM05D002646 ORTHO05D002782 3.9e-19 99.0 72 65.3
CiPaw.16G059900 Carya illinoinensis HOM05D002646 ORTHO05D002782 6.6e-19 98.2 67 74.6
Ciclev10000434m.g Citrus clementina HOM05D002646 ORTHO05D002782 6.6e-19 98.2 69 69.6
CAN.G424.59 Capsicum annuum HOM05D002646 ORTHO05D002782 8.6e-19 97.8 80 62.5
Peaxi162Scf00258g00024 Petunia axillaris HOM05D002646 ORTHO05D002782 8.6e-19 97.8 76 63.2
Duzib041G0261 Durio zibethinus HOM05D002646 ORTHO05D002782 1.1e-18 97.4 65 76.9
MBI17_g36957_MAGBIO Magnolia biondii HOM05D002646 ORTHO05D002782 1.1e-18 97.4 80 58.8
PSO675G2317 Papaver somniferum HOM05D002646 ORTHO05D002782 1.1e-18 97.4 172 36.0
MBI16_g07737_MAGBIO Magnolia biondii HOM05D002646 ORTHO05D002782 1.5e-18 97.1 77 59.7
Nitab4.5_0004768g0020 Nicotiana tabacum HOM05D002646 ORTHO05D002782 1.5e-18 97.1 72 66.7
CSS0033317 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 1.9e-18 96.7 76 65.8
CSS0043279 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 1.9e-18 96.7 76 65.8
Peaxi162Scf00345g00113 Petunia axillaris HOM05D002646 ORTHO05D002782 2.5e-18 96.3 74 63.5
ATR0568G218 Amborella trichopoda HOM05D002646 ORTHO05D002782 3.3e-18 95.9 74 60.8
PSO017G2345 Papaver somniferum HOM05D002646 ORTHO05D002782 3.3e-18 95.9 172 34.9
Gohir.A06G009600 Gossypium hirsutum HOM05D002646 ORTHO05D002782 4.3e-18 95.5 77 59.7
Nitab4.5_0000017g0180 Nicotiana tabacum HOM05D002646 ORTHO05D002782 4.3e-18 95.5 72 65.3
Gohir.D06G005550 Gossypium hirsutum HOM05D002646 ORTHO05D002782 5.6e-18 95.1 77 61.0
Gorai.010G009700 Gossypium raimondii HOM05D002646 ORTHO05D002782 5.6e-18 95.1 77 61.0
CSS0011651 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 9.5e-18 94.4 72 66.7
BcaB07g31981 Brassica carinata HOM05D002646 ORTHO05D002782 1.6e-17 93.6 183 30.6
Lsat_1_v5_gn_5_28001 Lactuca sativa HOM05D002646 ORTHO05D002782 1.6e-17 93.6 78 57.7
Solyc07g025230.2 Solanum lycopersicum HOM05D002646 ORTHO05D002782 1.6e-17 93.6 76 61.8
Sopen07g013020 Solanum pennellii HOM05D002646 ORTHO05D002782 1.6e-17 93.6 76 61.8
Sopen07g013050 Solanum pennellii HOM05D002646 ORTHO05D002782 1.6e-17 93.6 76 61.8
PGSC0003DMG400005374 Solanum tuberosum HOM05D002646 ORTHO05D002782 1.6e-17 93.6 76 61.8
A06p15700 Brassica napus HOM05D002646 ORTHO05D002782 2.1e-17 93.2 190 29.5
C05p18020 Brassica napus HOM05D002646 ORTHO05D002782 2.1e-17 93.2 190 29.5
BraA06t24679Z Brassica rapa HOM05D002646 ORTHO05D002782 2.1e-17 93.2 190 29.5
Solyc07g025200.1 Solanum lycopersicum HOM05D002646 ORTHO05D002782 2.1e-17 93.2 76 61.8
Haze_17945 Corylus avellana HOM05D002646 ORTHO05D002782 2.8e-17 92.8 68 70.6
Phvul.001G013700 Phaseolus vulgaris HOM05D002646 ORTHO05D002782 2.8e-17 92.8 191 34.0
CsaV3_2G028870 Cucumis sativus L. HOM05D002646 ORTHO05D002782 3.6e-17 92.4 71 62.0
Sp1g17390 Schrenkiella parvula HOM05D002646 ORTHO05D002782 4.7e-17 92.0 185 29.7
BcaC05g25840 Brassica carinata HOM05D002646 ORTHO05D002782 8.1e-17 91.3 190 29.5
BolC5t30509H Brassica oleracea HOM05D002646 ORTHO05D002782 8.1e-17 91.3 190 29.5
Carub.0001s1909 Capsella rubella HOM05D002646 ORTHO05D002782 8.1e-17 91.3 191 30.9
Cfa018170 Carpinus fangiana HOM05D002646 ORTHO05D002782 1.1e-16 90.9 66 65.2
MELO3C010957.2 Cucumis melo HOM05D002646 ORTHO05D002782 1.1e-16 90.9 71 62.0
DCAR_006185 Daucus carota HOM05D002646 ORTHO05D002782 1.1e-16 90.9 226 31.0
Thhalv10006936m.g Eutrema salsugineum HOM05D002646 ORTHO05D002782 1.1e-16 90.9 183 31.1
SGA_v2.0_scaffold201G41411 Striga asiatica HOM05D002646 ORTHO05D002782 1.1e-16 90.9 76 61.8
Aqoxy2G03652 Aquilegia oxysepala HOM05D002646 ORTHO05D002782 2.3e-16 89.7 161 32.3
DCAR_019536 Daucus carota HOM05D002646 ORTHO05D002782 2.3e-16 89.7 154 35.1
vmacro21650 Vaccinium macrocarpon HOM05D002646 ORTHO05D002782 4.0e-16 89.0 84 57.1
COL.COLO4_26294 Corchorus olitorius HOM05D002646 ORTHO05D002782 5.2e-16 88.6 79 60.8
Sed0008809 Sechium edule HOM05D002646 ORTHO05D002782 1.5e-15 87.0 90 51.1
Os02g0611400 Oryza sativa ssp. japonica HOM05D002646 ORTHO05D002782 2.0e-15 86.7 234 27.4
MSTRG.25182 Avicennia marina HOM05D002646 ORTHO05D002782 2.6e-15 86.3 76 59.2
Hund06823 Selenicereus undatus HOM05D002646 ORTHO05D002782 2.6e-15 86.3 68 58.8
AT1G19520 Arabidopsis thaliana HOM05D002646 ORTHO05D002782 3.4e-15 85.9 188 29.3
AL1G32270 Arabidopsis lyrata HOM05D002646 ORTHO05D002782 4.4e-15 85.5 188 29.3
VMungo0647G1092 Vigna mungo HOM05D002646 ORTHO05D002782 1.7e-14 83.6 160 31.9
CDE11G0385 Ceratophyllum demersum HOM05D002646 ORTHO05D002782 2.2e-14 83.2 93 46.2
TPR.G20158 Trifolium pratense HOM05D002646 ORTHO05D002782 2.9e-14 82.8 154 30.5
RcHm_v2.0_Chr7g0207751 Rosa chinensis HOM05D002646 ORTHO05D002782 1.4e-13 80.5 63 63.5
FAN05G0303 Fragaria x ananassa HOM05D002646 ORTHO05D002782 1.9e-13 80.1 76 59.2
Ca_13365_v3 Cicer arietinum L. HOM05D002646 ORTHO05D002782 3.2e-13 79.3 65 56.9
arahy.Tifrunner.gnm1.ann1.GFJ2Z4 Arachis hypogaea HOM05D002646 ORTHO05D002782 4.1e-13 79.0 74 54.1
arahy.Tifrunner.gnm1.ann1.RWN5MT Arachis hypogaea HOM05D002646 ORTHO05D002782 4.1e-13 79.0 74 54.1
AUR62043098 Chenopodium quinoa HOM05D002646 ORTHO05D002782 4.1e-13 79.0 81 50.6
ECA246G2606 Erigeron canadensis HOM05D002646 ORTHO05D002782 4.1e-13 79.0 75 50.7
FAN02G0761 Fragaria x ananassa HOM05D002646 ORTHO05D002782 5.4e-13 78.6 76 59.2
CARHR020090 Cardamine hirsuta HOM05D002646 ORTHO05D002782 7.1e-13 78.2 183 27.3
FvH4_6g24430 Fragaria vesca HOM05D002646 ORTHO05D002782 7.1e-13 78.2 76 57.9
FAN14G1091 Fragaria x ananassa HOM05D002646 ORTHO05D002782 7.1e-13 78.2 76 57.9
THA.LOC104813824 Tarenaya hassleriana HOM05D002646 ORTHO05D002782 9.2e-13 77.8 116 38.8
Migut.C00748 Erythranthe guttata HOM05D002646 ORTHO05D002782 1.2e-12 77.4 76 52.6
Hma1.2p1_1663F.1_g296320 Hydrangea macrophylla HOM05D002646 ORTHO05D002782 1.2e-12 77.4 113 36.3
Medtr1g022360 Medicago truncatula HOM05D002646 ORTHO05D002782 2.1e-12 76.6 65 55.4
AUR62025546 Chenopodium quinoa HOM05D002646 ORTHO05D002782 4.6e-12 75.5 81 49.4
ClCG08G014890 Citrullus lanatus HOM05D002646 ORTHO05D002782 4.6e-12 75.5 54 68.5
HPP92_021824 Vanilla planifolia HOM05D002646 ORTHO05D002782 6.0e-12 75.1 232 26.3
Prupe.6G124500 Prunus persica HOM05D002646 ORTHO05D002782 7.8e-12 74.7 56 67.9
FAN09G1605 Fragaria x ananassa HOM05D002646 ORTHO05D002782 1.0e-11 74.3 65 60.0
Lalb_Chr14g0369361 Lupinus albus HOM05D002646 ORTHO05D002782 3.0e-11 72.8 143 29.4
EL10Ac4g08951 Beta vulgaris HOM05D002646 ORTHO05D002782 1.1e-10 70.9 78 50.0
Psat6g008080 Pisum sativum HOM05D002646 ORTHO05D002782 1.5e-10 70.5 61 55.7
SEGI_28365 Sequoiadendron giganteum HOM05D002646 ORTHO05D002782 2.5e-10 69.7 82 40.2
Aa31LG7G4170 Aethionema arabicum HOM05D002646 ORTHO05D002782 9.6e-10 67.8 103 36.9
Cc10_g02720 Coffea canephora HOM05D002646 ORTHO05D002782 9.6e-10 67.8 62 50.0
Ah.10g033130 Amaranthus hybridus HOM05D002646 ORTHO05D002782 4.7e-09 65.5 130 33.8
Nitab4.5_0000624g0070 Nicotiana tabacum HOM05D002646 ORTHO05D002782 8.1e-09 64.7 110 41.8
HPP92_001656 Vanilla planifolia HOM05D002646 ORTHO05D002782 5.2e-08 62.0 72 41.7
Potri.002G034900 Populus trichocarpa HOM05D002646 ORTHO05D002782 1.2e-07 60.8 43 69.8
unitig_46.g18436 Utricularia gibba HOM05D002509 ORTHO05D002758 1.2e-07 60.8 101 37.6
Peaxi162Scf00303g00042 Petunia axillaris HOM05D002646 ORTHO05D002782 2.0e-07 60.1 48 68.8
AagrBONN_evm.TU.Sc2ySwM_344.5187 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.3e-06 57.4 161 26.7
Zm00001eb246850 Zea mays HOM05D002646 ORTHO05D002782 6.4e-06 55.1 79 34.2


User provided reference genes

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