Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 6.2e-194 680.6 350 100.0
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.6e-77 293.9 395 48.4
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 3.1e-76 289.7 363 51.5
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 1.2e-75 287.7 393 48.3
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 3.1e-68 263.1 388 47.7
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 3.5e-64 249.6 378 43.1
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 1.5e-59 234.2 387 42.1
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 2.6e-59 233.4 382 42.1
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 2.2e-58 230.3 366 45.4
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 6.5e-58 228.8 394 39.6
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 7.2e-57 225.3 370 41.4
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 1.6e-56 224.2 387 42.6
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 6.7e-55 218.8 367 46.0
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 9.7e-54 214.9 371 42.6
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 3.7e-53 213.0 357 38.9
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 8.2e-53 211.8 378 40.5
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 5.0e-50 202.6 357 39.2
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 5.0e-50 202.6 377 38.7
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 1.9e-49 200.7 375 42.1
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 1.9e-49 200.7 375 42.1
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 3.2e-49 199.9 380 41.8
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 1.6e-48 197.6 379 40.1
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 2.7e-48 196.8 369 39.0
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 2.6e-46 190.3 376 39.1
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 4.4e-46 189.5 353 38.5
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 4.8e-45 186.0 369 35.8
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 4.1e-44 183.0 364 39.3
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 1.5e-43 181.0 320 42.2
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 1.3e-42 177.9 374 37.2
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 2.5e-41 173.7 362 37.3
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 2.1e-40 170.6 356 36.8
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 6.1e-40 169.1 411 35.8
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.8e-39 167.5 353 37.4
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 2.3e-39 167.2 374 36.4
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 3.9e-39 166.4 365 38.4
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 5.2e-39 166.0 354 37.3
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 4.4e-38 162.9 356 36.8
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 4.4e-38 162.9 377 37.1
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 9.7e-38 161.8 397 36.8
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 1.7e-37 161.0 401 36.2
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 8.2e-37 158.7 361 35.7
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 2.4e-36 157.1 191 50.8
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.4e-36 157.1 372 37.9
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 1.2e-35 154.8 393 35.1
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 1.2e-35 154.8 364 35.4
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 5.9e-35 152.5 366 35.0
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 6.5e-34 149.1 359 34.0
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 6.5e-34 149.1 343 35.6
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 8.5e-34 148.7 372 36.8
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 1.1e-33 148.3 379 33.2
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 5.5e-33 146.0 382 33.8
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 7.2e-33 145.6 390 34.1
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 7.2e-33 145.6 367 37.3
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 2.1e-32 144.1 374 35.3
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 1.0e-31 141.7 390 31.3
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 1.4e-31 141.4 362 34.8
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.3e-31 140.6 355 36.3
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 2.3e-31 140.6 124 60.5
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 3.0e-31 140.2 368 31.0
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 3.0e-31 140.2 364 33.2
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 4.0e-31 139.8 373 34.9
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 4.0e-31 139.8 366 36.1
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 5.7e-30 136.0 342 35.1
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 9.7e-30 135.2 352 35.2
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 8.3e-29 132.1 380 30.3
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 1.8e-28 131.0 383 30.8
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 4.1e-28 129.8 380 31.3
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 5.3e-28 129.4 367 30.5
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 5.3e-28 129.4 395 34.4
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.2e-27 128.3 136 52.9
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 2.7e-27 127.1 378 31.7
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 1.3e-26 124.8 351 34.8
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 1.3e-26 124.8 271 38.0
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 1.7e-26 124.4 365 30.1
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 1.7e-26 124.4 374 32.6
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 2.2e-26 124.0 371 30.2
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 1.1e-25 121.7 352 34.7
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 3.2e-25 120.2 353 30.0
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 3.2e-25 120.2 362 32.6
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 5.5e-25 119.4 344 31.7
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 1.2e-24 118.2 356 30.9
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 2.7e-24 117.1 397 31.2
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 8.0e-24 115.5 357 31.9
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 1.0e-23 115.2 359 32.0
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 1.0e-23 115.2 373 31.9
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 1.8e-23 114.4 295 35.9
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 1.8e-23 114.4 353 33.1
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.8e-23 114.4 359 29.0
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 3.0e-23 113.6 352 29.8
Sopen04g031160 Solanum pennellii HOM05D006874 ORTHO05D008334 4.0e-23 113.2 288 32.6
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 8.8e-23 112.1 360 28.1
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 1.2e-22 111.7 377 32.1
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 1.5e-22 111.3 364 30.5
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 2.0e-22 110.9 355 30.7
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 3.4e-22 110.2 355 30.7
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 4.4e-22 109.8 371 32.9
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 5.7e-22 109.4 355 30.4
Gohir.A01G123500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 4.8e-21 106.3 351 33.0
Gorai.002G136000 Gossypium raimondii HOM05D006874 ORTHO05D008334 3.1e-20 103.6 351 32.8
Dinv16069 Davidia involucrata HOM05D006874 ORTHO05D008334 3.5e-19 100.1 368 29.3
SGA_v2.0_scaffold14G07085 Striga asiatica HOM05D000285 ORTHO05D000241 1.3e-18 98.2 126 42.9
Actinidia00356 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.7e-18 97.8 217 35.9
VMungo0647G0698 Vigna mungo HOM05D006874 ORTHO05D008334 1.7e-18 97.8 366 29.2
Lj5g0027457 Lotus japonicus HOM05D006874 ORTHO05D008334 2.9e-18 97.1 363 30.6
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 6.6e-18 95.9 196 36.2
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 8.6e-18 95.5 358 27.7
TAR376G0413 Trochodendron aralioides HOM05D006874 ORTHO05D008334 8.6e-18 95.5 177 41.2
Cpa.g.sc91.58 Carica papaya HOM05D016697 ORTHO05D018163 1.1e-17 95.1 375 28.0
CDE02G2198 Ceratophyllum demersum HOM05D006874 ORTHO05D008334 9.5e-17 92.0 352 29.0
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.8e-15 87.8 129 45.0
RhsimUnG0041100 Rhododendron simsii HOM05D063883 ORTHO05D008334 1.1e-12 78.6 370 27.0
RhsimUnG0123100 Rhododendron simsii HOM05D063883 ORTHO05D008334 1.1e-12 78.6 370 27.0
arahy.Tifrunner.gnm1.ann1.0IC8QA Arachis hypogaea HOM05D006874 ORTHO05D008334 2.4e-12 77.4 261 31.4
COL.COLO4_28465 Corchorus olitorius HOM05D006874 ORTHO05D008334 5.4e-12 76.3 183 39.9
Thecc.02G119800 Theobroma cacao HOM05D016697 ORTHO05D018163 5.4e-12 76.3 374 26.2
Gohir.D01G111300 Gossypium hirsutum HOM05D006874 ORTHO05D008334 9.2e-12 75.5 348 28.7
TAR625G0319 Trochodendron aralioides HOM05D006874 ORTHO05D008334 6.1e-08 62.8 92 44.6
Migut.O00023 Erythranthe guttata HOM05D006874 ORTHO05D008334 4.0e-07 60.1 148 36.5
Atru.chr5.2294 Acer truncatum HOM05D016697 ORTHO05D018163 1.2e-06 58.5 205 28.8
Lj2g0008576 Lotus japonicus HOM05D023496 ORTHO05D025628 1.2e-06 58.5 372 24.7
CDE01G0825 Ceratophyllum demersum HOM05D002048 ORTHO05D002146 1.5e-06 58.2 185 29.7
Ciclev10030239m.g Citrus clementina HOM05D006874 ORTHO05D008334 3.4e-06 57.0 107 30.8


User provided reference genes

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