Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv39143 Davidia involucrata HOM05D005079 ORTHO05D006362 0.0e+00 1241.9 590 100.0
Hma1.2p1_1172F.1_g263540 Hydrangea macrophylla HOM05D005079 ORTHO05D006362 6.0e-282 973.8 590 79.3
Hma1.2p1_1172F.1_g263550 Hydrangea macrophylla HOM05D005079 ORTHO05D006362 6.0e-282 973.8 590 79.3
Hma1.2p1_1786F.1_g302370 Hydrangea macrophylla HOM05D005079 ORTHO05D006362 5.6e-280 967.2 669 70.9
GSVIVG01001320001 Vitis vinifera HOM05D005079 ORTHO05D006362 2.2e-276 955.3 590 77.1
vmacro00317 Vaccinium macrocarpon HOM05D005079 ORTHO05D006362 1.9e-275 952.2 589 76.6
Actinidia14431 Actinidia chinensis HOM05D005079 ORTHO05D006362 2.7e-274 948.3 587 78.0
TAR629G2205 Trochodendron aralioides HOM05D005079 ORTHO05D006362 1.4e-270 936.0 590 73.4
QL12p012230 Quercus lobata HOM05D005079 ORTHO05D006362 3.1e-270 934.9 590 75.4
CiPaw.11G153800 Carya illinoinensis HOM05D005079 ORTHO05D006362 2.6e-269 931.8 590 74.7
Haze_07920 Corylus avellana HOM05D005079 ORTHO05D006362 1.2e-266 922.9 577 75.2
CSS0023122 Camellia sinensis var. sinensis HOM05D005079 ORTHO05D006362 2.1e-266 922.2 589 76.1
Rhsim02G0165500 Rhododendron simsii HOM05D005079 ORTHO05D006362 1.3e-265 919.5 589 74.5
Cfa012713 Carpinus fangiana HOM05D005079 ORTHO05D006362 2.3e-265 918.7 577 74.9
Prupe.5G069000 Prunus persica HOM05D005079 ORTHO05D006362 1.7e-260 902.5 589 71.0
Duzib205G0133 Durio zibethinus HOM05D005079 ORTHO05D006362 1.1e-254 883.2 590 71.4
COL.COLO4_37183 Corchorus olitorius HOM05D005079 ORTHO05D006362 2.4e-254 882.1 590 71.0
Potri.003G076500 Populus trichocarpa HOM05D005079 ORTHO05D006362 3.4e-253 878.2 589 70.1
MD04G1063800 Malus domestica HOM05D005079 ORTHO05D006362 5.9e-253 877.5 589 69.8
RcHm_v2.0_Chr7g0203171 Rosa chinensis HOM05D005079 ORTHO05D006362 2.2e-252 875.5 589 69.9
Nn1g01009 Nelumbo nucifera HOM05D005079 ORTHO05D006362 6.5e-252 874.0 590 71.7
Thecc.03G252100 Theobroma cacao HOM05D005079 ORTHO05D006362 2.5e-251 872.1 590 70.5
Sabra03G0047100 Salix brachista HOM05D005079 ORTHO05D006362 4.2e-251 871.3 589 69.6
CsaV3_5G004210 Cucumis sativus L. HOM05D005079 ORTHO05D006362 2.7e-250 868.6 590 69.7
MELO3C005534.2 Cucumis melo HOM05D005079 ORTHO05D006362 3.5e-250 868.2 590 69.5
CANSAT21G1873 Cannabis sativa HOM05D005079 ORTHO05D006362 6.7e-249 864.0 595 68.9
Sed0023601 Sechium edule HOM05D005079 ORTHO05D006362 2.5e-248 862.1 589 68.8
Gohir.A03G008400 Gossypium hirsutum HOM05D005079 ORTHO05D006362 7.4e-248 860.5 590 68.5
Gorai.003G171100 Gossypium raimondii HOM05D005079 ORTHO05D006362 9.7e-248 860.1 590 68.5
FAN18G1282 Fragaria x ananassa HOM05D005079 ORTHO05D006362 1.3e-247 859.8 587 68.7
FvH4_5g18820 Fragaria vesca HOM05D005079 ORTHO05D006362 1.4e-246 856.3 587 68.3
FAN04G2358 Fragaria x ananassa HOM05D005079 ORTHO05D006362 1.8e-246 855.9 589 68.1
Ciclev10023597m.g Citrus clementina HOM05D005079 ORTHO05D006362 3.8e-244 848.2 590 68.1
DCAR_008489 Daucus carota HOM05D005079 ORTHO05D006362 1.1e-243 846.7 591 67.5
Cpa.g.sc29.152 Carica papaya HOM05D005079 ORTHO05D006362 1.9e-243 845.9 591 68.2
Cc08_g12490 Coffea canephora HOM05D005079 ORTHO05D006362 1.9e-243 845.9 589 67.4
PSO017G3550 Papaver somniferum HOM05D005079 ORTHO05D006362 1.0e-241 840.1 598 66.2
TWI81G0601 Tripterygium wilfordii HOM05D005079 ORTHO05D006362 1.4e-241 839.7 590 67.3
Gohir.D03G162500 Gossypium hirsutum HOM05D005079 ORTHO05D006362 6.7e-241 837.4 590 67.6
Aqoxy7G00758 Aquilegia oxysepala HOM05D005079 ORTHO05D006362 8.8e-241 837.0 588 67.9
HanXRQChr17g0549661 Helianthus annuus HOM05D005079 ORTHO05D006362 8.8e-241 837.0 589 65.9
Sopen06g020790 Solanum pennellii HOM05D005079 ORTHO05D006362 7.4e-240 833.9 589 64.3
Lalb_Chr16g0386651 Lupinus albus HOM05D005079 ORTHO05D006362 6.3e-239 830.9 590 66.8
Glyma.05G059000 Glycine max HOM05D005079 ORTHO05D006362 3.1e-238 828.6 587 66.3
Solyc06g060670.4 Solanum lycopersicum HOM05D005079 ORTHO05D006362 3.1e-238 828.6 601 63.6
MBI04_g09493_MAGBIO Magnolia biondii HOM05D005079 ORTHO05D006362 2.0e-237 825.9 585 67.4
SalBow6G6450 Salvia bowleyana HOM05D005079 ORTHO05D006362 7.7e-237 823.9 589 64.9
MSTRG.25528 Avicennia marina HOM05D005079 ORTHO05D006362 1.3e-236 823.2 591 65.3
CAN.G1037.9 Capsicum annuum HOM05D005079 ORTHO05D006362 8.5e-236 820.5 589 63.8
Ca_21961_v3 Cicer arietinum L. HOM05D005079 ORTHO05D006362 1.1e-235 820.1 591 65.1
Psat4g071960 Pisum sativum HOM05D005079 ORTHO05D006362 2.5e-235 818.9 588 65.3
Sc01g0008470 Simmondsia chinensis HOM05D005079 ORTHO05D006362 3.2e-235 818.5 594 65.5
Nitab4.5_0000618g0020 Nicotiana tabacum HOM05D005079 ORTHO05D006362 9.4e-235 817.0 587 64.1
ECA232G1687 Erigeron canadensis HOM05D005079 ORTHO05D006362 8.8e-233 810.4 589 65.5
Medtr4g100980 Medicago truncatula HOM05D005079 ORTHO05D006362 8.8e-233 810.4 589 65.4
FAN08G1452 Fragaria x ananassa HOM05D005079 ORTHO05D006362 3.3e-232 808.5 602 64.8
Eucgr.D02075 Eucalyptus grandis HOM05D005079 ORTHO05D006362 4.4e-232 808.1 590 64.9
Migut.A00986 Erythranthe guttata HOM05D005079 ORTHO05D006362 5.7e-232 807.7 590 63.9
Lj4g0012374 Lotus japonicus HOM05D005079 ORTHO05D006362 5.7e-232 807.7 588 65.6
Lj8C262G4 Lonicera japonica HOM05D005079 ORTHO05D006362 8.2e-231 803.9 512 74.4
TPR.G37701 Trifolium pratense HOM05D005079 ORTHO05D006362 3.1e-230 802.0 590 64.2
Hund11595 Selenicereus undatus HOM05D005079 ORTHO05D006362 1.7e-228 796.2 611 63.7
Phvul.006G006200 Phaseolus vulgaris HOM05D005079 ORTHO05D006362 9.4e-227 790.4 587 64.7
PGR031G3122 Punica granatum HOM05D005079 ORTHO05D006362 1.6e-226 789.6 590 62.9
ATR0317G049 Amborella trichopoda HOM05D005079 ORTHO05D006362 4.0e-225 785.0 587 63.2
VMungo0540G1603 Vigna mungo HOM05D005079 ORTHO05D006362 7.5e-224 780.8 587 63.9
Peaxi162Scf02065g00020 Petunia axillaris HOM05D005079 ORTHO05D006362 1.7e-223 779.6 587 63.5
Manes.01G080200 Manihot esculenta HOM05D005079 ORTHO05D006362 4.8e-223 778.1 589 64.2
ClCG01G004030 Citrullus lanatus HOM05D005079 ORTHO05D006362 5.9e-221 771.2 590 63.4
AUR62042789 Chenopodium quinoa HOM05D005079 ORTHO05D006362 3.8e-220 768.5 590 61.7
Atru.chr9.1320 Acer truncatum HOM05D005079 ORTHO05D006362 1.9e-219 766.1 510 71.4
EL10Ac5g13073 Beta vulgaris HOM05D005079 ORTHO05D006362 2.2e-215 752.7 590 60.2
BolC1t02557H Brassica oleracea HOM05D005079 ORTHO05D006362 1.4e-214 750.0 592 60.6
C01p26130 Brassica napus HOM05D005079 ORTHO05D006362 5.4e-214 748.0 592 60.5
BcaC09g50374 Brassica carinata HOM05D005079 ORTHO05D006362 2.7e-213 745.7 592 60.3
Sp7g15190 Schrenkiella parvula HOM05D005079 ORTHO05D006362 2.2e-212 742.7 591 60.6
THA.LOC104815493 Tarenaya hassleriana HOM05D005079 ORTHO05D006362 1.9e-211 739.6 592 60.1
A01p20660 Brassica napus HOM05D005079 ORTHO05D006362 5.5e-211 738.0 592 59.6
BraA01t02000Z Brassica rapa HOM05D005079 ORTHO05D006362 1.6e-210 736.5 592 59.5
BcaNung00170 Brassica carinata HOM05D005079 ORTHO05D006362 2.1e-210 736.1 593 59.9
Migut.A00942 Erythranthe guttata HOM05D005079 ORTHO05D006362 4.7e-210 734.9 519 64.5
Os06g0105500 Oryza sativa ssp. japonica HOM05D005079 ORTHO05D006362 4.7e-210 734.9 586 57.7
Carub.0007s2483 Capsella rubella HOM05D005079 ORTHO05D006362 6.1e-210 734.6 595 59.3
Aa31LG2G12700 Aethionema arabicum HOM05D005079 ORTHO05D006362 1.0e-209 733.8 592 59.5
CARHR223060 Cardamine hirsuta HOM05D005079 ORTHO05D006362 3.0e-209 732.3 592 60.0
SGA_v2.0_scaffold120G32882 Striga asiatica HOM05D005079 ORTHO05D006362 2.6e-208 729.2 611 57.6
AL7G38200 Arabidopsis lyrata HOM05D005079 ORTHO05D006362 2.2e-207 726.1 593 58.7
Zm00001eb379320 Zea mays HOM05D005079 ORTHO05D006362 1.4e-206 723.4 587 56.7
AT4G16570 Arabidopsis thaliana HOM05D005079 ORTHO05D006362 2.4e-206 722.6 594 59.1
Thhalv10024535m.g Eutrema salsugineum HOM05D005079 ORTHO05D006362 2.3e-204 716.1 592 58.4
Nitab4.5_0008754g0010 Nicotiana tabacum HOM05D005079 ORTHO05D006362 2.2e-191 672.9 648 52.2
Ah.12g056870 Amaranthus hybridus HOM05D005079 ORTHO05D006362 2.0e-189 666.4 589 55.5
AUR62007514 Chenopodium quinoa HOM05D005079 ORTHO05D006362 1.3e-188 663.7 590 55.3
HPP92_008921 Vanilla planifolia HOM05D005079 ORTHO05D006362 2.0e-184 649.8 527 58.4
unitig_744.g24463 Utricularia gibba HOM05D005079 ORTHO05D006362 2.4e-174 616.3 590 51.9
Pp3c6_22100 Physcomitrium patens HOM05D005079 ORTHO05D006362 6.2e-146 521.9 609 43.2
AagrBONN_evm.TU.Sc2ySwM_344.1170 Anthoceros agrestis HOM05D005079 ORTHO05D006362 1.7e-143 513.8 620 43.1
SMO365G0062 Selaginella moellendorffii HOM05D005079 ORTHO05D006362 2.5e-139 500.0 590 43.6
CSS0009127 Camellia sinensis var. sinensis HOM05D005079 ORTHO05D006362 1.0e-132 478.0 589 47.9
Oeu020426.1 Olea europaea HOM05D005079 ORTHO05D006362 3.4e-128 463.0 297 71.0
Migut.N00546 Erythranthe guttata HOM05D005079 ORTHO05D006362 5.0e-127 459.1 342 64.9
SMO014G0029 Selaginella moellendorffii HOM05D005079 ORTHO05D006362 8.2e-122 441.8 588 40.5
AUR62044148 Chenopodium quinoa HOM05D005079 ORTHO05D006362 3.1e-121 439.9 512 47.7
FAN13G2148 Fragaria x ananassa HOM05D005079 ORTHO05D006362 6.9e-121 438.7 514 46.3
SMO304G0051 Selaginella moellendorffii HOM05D005079 ORTHO05D006362 1.5e-120 437.6 588 40.0
SMO176G0009 Selaginella moellendorffii HOM05D005079 ORTHO05D006362 4.5e-120 436.0 592 41.2
Lsat_1_v5_gn_5_188000 Lactuca sativa HOM05D005079 ORTHO05D006362 1.0e-119 434.9 342 63.2
PGSC0003DMG400013813 Solanum tuberosum HOM05D005079 ORTHO05D006362 6.3e-114 415.6 290 65.5
SMO304G0113 Selaginella moellendorffii HOM05D013654 ORTHO05D006362 7.2e-110 402.1 587 38.2
SMO304G0004 Selaginella moellendorffii HOM05D005079 ORTHO05D006362 2.1e-109 400.6 547 39.3
HPP92_028199 Vanilla planifolia HOM05D005079 ORTHO05D006362 9.7e-107 391.7 337 55.8
SMO014G0007 Selaginella moellendorffii HOM05D005079 ORTHO05D006362 2.0e-91 340.9 593 35.8
CBR_g41210 Chara braunii HOM05D005079 ORTHO05D006362 1.9e-86 324.3 547 36.9
Hma1.2p1_1786F.1_g302380 Hydrangea macrophylla HOM05D005079 ORTHO05D006362 1.3e-79 301.6 186 74.7
CDE04G1017 Ceratophyllum demersum HOM05D005079 ORTHO05D006362 7.5e-75 285.8 434 37.6
MBI09_g47605_MAGBIO Magnolia biondii HOM05D005079 ORTHO05D006362 7.3e-70 269.2 165 72.7
Mapoly0021s0158 Marchantia polymorpha HOM05D005079 ORTHO05D006362 4.1e-65 253.4 258 45.0
Glyma.17G141300 Glycine max HOM05D005079 ORTHO05D006362 3.5e-64 250.4 148 70.3
Migut.N00545 Erythranthe guttata HOM05D005079 ORTHO05D006362 1.5e-59 235.0 193 56.5
SEGI_13987 Sequoiadendron giganteum HOM05D005079 ORTHO05D006362 1.6e-56 224.9 205 48.3
Mapoly0021s0157 Marchantia polymorpha HOM05D005079 ORTHO05D006362 2.1e-45 188.0 193 51.3
RcHm_v2.0_Chr3g0497351 Rosa chinensis HOM05D005079 ORTHO05D006362 2.1e-32 144.8 96 69.8
C01p11340 Brassica napus HOM05D005079 ORTHO05D006362 3.2e-25 120.9 95 68.4
BolC1t01102H Brassica oleracea HOM05D005079 ORTHO05D006362 3.2e-25 120.9 95 68.4
Lj4g0004414 Lotus japonicus HOM05D005079 ORTHO05D006362 1.6e-24 118.6 109 58.7
SEGI_21709 Sequoiadendron giganteum HOM05D005079 ORTHO05D006362 2.5e-22 111.3 77 61.0
PRCOL_00002472 Prasinoderma coloniale HOM05D005079 ORTHO05D006362 4.5e-11 73.9 202 28.7
PRCOL_00004414 Prasinoderma coloniale HOM05D005079 ORTHO05D034446 1.9e-09 68.6 178 28.7
Cre02.g141626 Chlamydomonas reinhardtii HOM05D005079 ORTHO05D006362 9.4e-09 66.2 130 32.3
CBR_g41214 Chara braunii HOM05D005079 ORTHO05D006362 1.2e-08 65.9 65 41.5
MCO07G501 Micromonas commoda HOM05D005079 ORTHO05D006362 2.1e-08 65.1 225 23.1
MCO05G104 Micromonas commoda HOM05D005079 ORTHO05D006362 4.7e-08 63.9 192 29.2
MCO11G565 Micromonas commoda HOM05D005079 ORTHO05D034446 6.1e-08 63.5 170 27.6
MBI17_g38828_MAGBIO Magnolia biondii HOM05D005079 ORTHO05D000022 1.0e-07 62.8 32 71.9
PRCOL_00004569 Prasinoderma coloniale HOM05D005079 ORTHO05D006362 2.0e-06 58.5 272 24.6
Lsat_1_v5_gn_4_132320 Lactuca sativa HOM05D005079 ORTHO05D006362 5.7e-06 57.0 58 53.4
Mapoly0078s0032 Marchantia polymorpha HOM05D000639 ORTHO05D003485 9.7e-06 56.2 226 24.3


User provided reference genes

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